Implications For Biodiversity Research Articles

Trace gas oxidizers are widespread and active members of soil microbial communities.

Soil microorganisms globally are thought to be sustained primarily by organic carbon sources. Certain bacteria also consume inorganic energy sources such as trace gases, but they are presumed to be rare community members, except within some oligotrophic soils. Here we combined metagenomic, biogeochemical and modelling approaches to determine how soil microbial communities meet energy and carbon needs. Analysis of 40 metagenomes and 757 derived genomes indicated that over 70% of soil bacterial taxa encode enzymes to consume inorganic energy sources. Bacteria from 19 phyla encoded enzymes to use the trace gases hydrogen and carbon monoxide as supplemental electron donors for aerobic respiration. In addition, we identified a fourth phylum (Gemmatimonadota) potentially capable of aerobic methanotrophy. Consistent with the metagenomic profiling, communities within soil profiles from diverse habitats rapidly oxidized hydrogen, carbon monoxide and to a lesser extent methane below atmospheric concentrations. Thermodynamic modelling indicated that the power generated by oxidation of these three gases is sufficient to meet the maintenance needs of the bacterial cells capable of consuming them. Diverse bacteria also encode enzymes to use trace gases as electron donors to support carbon fixation. Altogether, these findings indicate that trace gas oxidation confers a major selective advantage in soil ecosystems, where availability of preferred organic substrates limits microbial growth. The observation that inorganic energy sources may sustain most soil bacteria also has broad implications for understanding atmospheric chemistry and microbial biodiversity in a changing world.

The SPOTT index: A proof-of-concept measure for tracking public disclosure in the palm oil industry

The production of palm oil has considerable implications for tropical biodiversity. Increasing the environmental, social and governance (ESG) transparency and disclosure of the industry will contribute towards sustainable consumption and production practices. Here, we present a method for producing an index to measure changes in ESG disclosure in the palm oil sector over time based on data collected on SPOTT (Sustainability Policy Transparency Toolkit). The SPOTT Index is based on the number of points scored by a company during an annual assessment, and the number of companies that were included in that assessment time period. The SPOTT Index shows that ESG disclosure of palm oil companies measured improved between 2014 and 2018. Although we demonstrate proof of concept based on a limited number of companies, continued growth of SPOTT will enable the production of a powerful metric in ESG disclosure beyond palm oil and also serve to incentivise sustainable production and consumption in the sector.

Feeding the world and returning half of the agricultural land back to nature

Earth’s total land area is 1.3916 × 1010 ha (3.43725 × 1010 ac), of which 4.285 × 108 ha (1.0584 × 109 ac) or 3.1% includes inland water (Knoema 2021). As a share of total land area, agricultural land (cropland and grazing land) is 37.4%, arable land is 11.1%, and forest land is 30.7% (Knoema 2021). Therefore, total agricultural land area is about 5.04 × 109 ha (1.25 × 1010 ac). Some estimates indicate that an additional 5.93 × 108 ha (1.4647 × 109 ac) land may be required to feed the projected population of 10 billion by 2050 (Ranganathan et al. 2018). Such excessive human land use, with strong implications for environmental health and biodiversity (Ramankutty et al. 2018), needs a critical and an objective assessment. In the context of a growing and increasingly affluent world population, it is important to objectively assess the land resources needed to meet the food and other critical requirements of humanity. Prevalence of undernourished people in the world decreased from 826 million to 695 million in 2019 (FAO et al. 2020). However, disruption in the food supply chain by the COVID-19 pandemic increased the prevalence of undernourishment by 82 to 132 million by December of 2020. This number is projected to increase by 17 to 61 million by the end of 2021 and 19 to 60 million by 2030 (FAO et al. 2020). However, the global total cereal grain production increased from 7.36 × 108 t (8.113 × 108 tn) in 1961 to about 3.0 × 109 t (3.3 × …

Public knowledge and perceptions of the impacts and importance of alien fish species in Malaysia: implications for freshwater biodiversity and conservation

Public knowledge and perceptions of the impacts and importance of alien fish species in Malaysia: implications for freshwater biodiversity and conservation

Conflict and Climate: Drivers of Fire Activity in Syria in the Twenty-First Century

AbstractIt has been 10 years since the start of the Syrian uprisings. While relative stability is improving overall, a new disaster, wildfires, impacted an already food-insecure population by burning through key production areas, damaging crops, soil, and livestock and causing air quality to deteriorate. As observed with remotely sensed data, fire affected 4.8% of Syria in 2019, as compared with the average 0.2%, and most fires were observed within agricultural land in the northeast. Abnormal amounts of rainfall during the 2019 growing season and, consequently, high soil moisture explained about 62% of the drastic increase in the burned area extent. In contrast, in 2020, fires continued despite the average amount of rainfall. Extremely high temperature could partially explain a 10-fold increase in the extent of burned area in 2020 but only within forested regions in the northwest. We argue that the abrupt changes in Syria’s fire activity were driven by the complex interactions among conflict, migration, land use, and climate. On one side, the ongoing conflict leads to a drastic increase in the number of accidental and deliberate fires and reduced capacity for fire response. On the other side, years of insecurity, widespread displacement, and economic instability left no choice for locals other than exploiting fires to remove natural vegetation for expanding farming, logging, and charcoal trading. The loss of agricultural production and natural vegetation to fire can have serious implications for food security, soil property, biodiversity, and ecosystem services, which can further exacerbate the already unstable economy and make ongoing violence even more intense.

Aligning quantitative vegetation classification and landscape scale mapping: updating the classification approach of the Regional Ecosystem classification system used in Queensland

Vegetation classification systems form a base for conservation management and the ecological exploration of the patterns and drivers of species’ distributions. A standardised system crossing administrative and geographical boundaries is widely recognised as most useful for broad-scale management. The Queensland Government, recognising this, uses the Regional Ecosystem (RE) classification system and accompanying mapping as a state-wide standardised vegetation classification system. This system informs legislation and policy at local, state and national levels, underpinning decisions that have wide-ranging implications for biodiversity and people’s livelihoods. It therefore needs to be robust from a scientific and legal perspective. The current approach in the RE system for identifying vegetation communities relies on expert-based class definition procedures. This is in contrast to best practice, which is based on quantitative procedures. This paper discusses the RE system in a global context and outlines the updated approach that incorporates quantitative class definition procedures, synthesises the research behind the updated approach and discusses its implications and implementation.

Post-Soviet shifts in grazing and fire regimes changed the functional plant community composition on the Eurasian steppe.

Globally, grasslands are shaped by grazing and fire, and grassland plants are adapted to these disturbances. However, temperate grasslands have been hotspots of land-use change, and how such changes affect interrelations between herbivory, fire and vegetation are poorly understood. Such land-use changes are widespread on the Eurasian steppe, where the dissolution of the Soviet Union in 1991 triggered the abandonment of cropland and pasture on globally relevant scales. Thus, to determine how relationships between plant functional composition, grazing and fire patterns changed after the Soviet Union dissolved, we studied a 358,000km2 region in the dry steppe of Kazakhstan, combining a large field dataset on plant functional traits with multi-scale satellite data. We found that increases in burned area corresponded to decreases in livestock grazing across large areas. Furthermore, fires occurred more often with high cover of grasses with high leaf dry matter content and thus higher flammability, whereas higher grazing pressure favoured grazing-tolerant woody forbs and ruderal plants with high specific leaf area. The current situation of low grazing pressure represents a historically exceptional, potentially non-analogue state. We suggest that the dissolution of the Soviet Union caused the disturbance regime to shift from grazer to fire control. As grazing and fire each result in different plant functional compositions, we propose that this led to widespread increases in grasses and associated changes in steppe plant community structure. These changes have potentially occurred across an area of more than 2millionkm2 , representing much of the world's largest temperate grassland area, with globally relevant, yet poorly understood implications for biodiversity and ecosystem functions such as carbon cycling. Additionally, future steppe management must also consider positive implications of abandonment ('rewilding') because reverting the regime shift in disturbance and associated changes in vegetation would require grazing animals to be reintroduced across vast areas.

Vegetation management and benthic macroinvertebrate communities in urban stormwater ponds: implications for regional biodiversity

Designed ecosystems (e.g., gardens or engineered ponds) are increasingly common components of urban landscapes and contribute valuable ecosystem services. However, management of designed ecosystems is typically vegetation-centric and often does not consider associated fauna. Urban ponds typify this relationship as their vegetation is managed to improve ecosystem services, such as aesthetics and stormwater runoff mitigation, but it is unclear how pond management affects associated organisms. Here, we used urban stormwater ponds as a study system to determine how vegetation management related to benthic macroinvertebrate communities in these systems. We compared macroinvertebrates across a range of actively managed to unmanaged stormwater ponds and differentiated direct relationships with vegetation structure from indirect relationships of vegetation modulating pond chemistry. Pond vegetation and chemistry had little influence on macroinvertebrate abundance or diversity but did explain substantial variability in community composition (34%). Actively managed stormwater ponds with simpler vegetation structure were dominated by Amphipoda (scuds) and Diptera (primarily midges), unmanaged ponds with more complex structure were dominated by Oligochaeta (worms), and ponds with intermediate structure were dominated by a variety of macroinvertebrates. These community associations with vegetation management primarily occurred indirectly via changes in pond chemistry, such as unmanaged ponds with higher tree and shrub cover harboring macroinvertebrates characteristic of low oxygen environments. Additionally, variation in management maximized community differences because different macroinvertebrate orders dominated at different management intensities. Variability in the management intensity of plant communities in stormwater ponds may therefore be a feasible strategy to enhance regional benthic macroinvertebrate biodiversity in urban landscapes.

The Functional Traits of Breeding Bird Communities at Traditional Folk Villages in Korea

Interaction between nature and human has formulated unique biodiversity in temperate regions. People have conserved and maintained traditional folk villages (TFVs) dominated with houses made of natural materials, arable land and surrounding elements of landscape. Until now, little attention has been given to understand the traits of breeding birds in TFVs of Korea. The aim of this study was to reveal traits of breeding birds in TFVs and get conservative implications for biodiversity. We selected five TFVs: Hahoe maeul (HA), Wanggok maeul (WG), Nagan maeul (NA), Yangdong maeul (YD), and Hangae maeul (HG). We surveyed breeding birds with line transect methods, and analyzed functional traits (diet type and nest type) of birds in TFVs. Among 60 species recorded, Passer montanus (PM), Streptopelia orientalis (SO), Hirundo rustica (HR), Pica pica (PP), Phoenicuros auroreus (PA), Paradoxornis webbiana (PW), Microscelis amaurotis (MA), Carduelis sinica (CA) and Oriolus chinensis (OC) could be potential breeding birds that prefer diverse habitats of TFVs in Korea. Compared to the breeding birds of rural, urban and forest environments, the diversity of nesting types for birds was high in TFVs. The diverse nest types of breeding birds can be linked with habitat heterogeneity influenced by sustainable interaction between nature and human in TFVs in Korea.

Plant invasion impacts on fungal community structure and function depend on soil warming and nitrogen enrichment

The impacts of invasive species on biodiversity may be mitigated or exacerbated by abiotic environmental changes. Invasive plants can restructure soil fungal communities with important implications for native biodiversity and nutrient cycling, yet fungal responses to invasion may depend on numerous anthropogenic stressors. In this study, we experimentally invaded a long-term soil warming and simulated nitrogen deposition experiment with the widespread invasive plant Alliaria petiolata (garlic mustard) and tested the responses of soil fungal communities to invasion, abiotic factors, and their interaction. We focused on the phytotoxic garlic mustard because it suppresses native mycorrhizae across forests of North America. We found that invasion in combination with warming, but not under ambient conditions or elevated nitrogen, significantly reduced soil fungal biomass and ectomycorrhizal relative abundances and increased relative abundances of general soil saprotrophs and fungal genes encoding for hydrolytic enzymes. These results suggest that warming potentially exacerbates fungal responses to plant invasion. Soils collected from uninvaded and invaded plots across eight forests spanning a 4 °C temperature gradient further demonstrated that the magnitude of fungal responses to invasion was positively correlated with mean annual temperature. Our study is one of the first empirical tests to show that the impacts of invasion on fungal communities depends on additional anthropogenic pressures and were greater in concert with warming than under elevated nitrogen or ambient conditions.

Forest and woodland replacement patterns following drought-related mortality

Forest vulnerability to drought is expected to increase under anthropogenic climate change, and drought-induced mortality and community dynamics following drought have major ecological and societal impacts. Here, we show that tree mortality concomitant with drought has led to short-term (mean 5 y, range 1 to 23 y after mortality) vegetation-type conversion in multiple biomes across the world (131 sites). Self-replacement of the dominant tree species was only prevalent in 21% of the examined cases and forests and woodlands shifted to nonwoody vegetation in 10% of them. The ultimate temporal persistence of such changes remains unknown but, given the key role of biological legacies in long-term ecological succession, this emerging picture of postdrought ecological trajectories highlights the potential for major ecosystem reorganization in the coming decades. Community changes were less pronounced under wetter postmortality conditions. Replacement was also influenced by management intensity, and postdrought shrub dominance was higher when pathogens acted as codrivers of tree mortality. Early change in community composition indicates that forests dominated by mesic species generally shifted toward more xeric communities, with replacing tree and shrub species exhibiting drier bioclimatic optima and distribution ranges. However, shifts toward more mesic communities also occurred and multiple pathways of forest replacement were observed for some species. Drought characteristics, species-specific environmental preferences, plant traits, and ecosystem legacies govern postdrought species turnover and subsequent ecological trajectories, with potential far-reaching implications for forest biodiversity and ecosystem services.

High potential for loss of permafrost landforms in a changing climate

The presence of ground ice in Arctic soils exerts a major effect on permafrost hydrology and ecology, and factors prominently into geomorphic landform development. As most ground ice has accumulated in near-surface permafrost, it is sensitive to variations in atmospheric conditions. Typical and regionally widespread permafrost landforms such as pingos, ice-wedge polygons, and rock glaciers are closely tied to ground ice. However, under ongoing climate change, suitable environmental spaces for preserving landforms associated with ice-rich permafrost may be rapidly disappearing. We deploy a statistical ensemble approach to model, for the first time, the current and potential future environmental conditions of three typical permafrost landforms, pingos, ice-wedge polygons and rock glaciers across the Northern Hemisphere. We show that by midcentury, the landforms are projected to lose more than one-fifth of their suitable environments under a moderate climate scenario (RCP4.5) and on average around one-third under a very high baseline emission scenario (RCP8.5), even when projected new suitable areas for occurrence are considered. By 2061–2080, on average more than 50% of the recent suitable conditions can be lost (RCP8.5). In the case of pingos and ice-wedge polygons, geographical changes are mainly attributed to alterations in thawing-season precipitation and air temperatures. Rock glaciers show air temperature-induced regional changes in suitable conditions strongly constrained by topography and soil properties. The predicted losses could have important implications for Arctic hydrology, geo- and biodiversity, and to the global climate system through changes in biogeochemical cycles governed by the geomorphology of permafrost landscapes. Moreover, our projections provide insights into the circumpolar distribution of various ground ice types and help inventory permafrost landforms in unmapped regions.

Knowledge sharing and adoption behaviour: An imperative to promote sustainable soil use and management

Knowledge sharing and adoption behaviour: An imperative to promote sustainable soil use and management

Degradation exceeds deforestation

Tropical Forest Forest degradation is a ubiquitous form of human disturbance of the forest landscape. Activities such as selective logging and extraction fall short of total deforestation but lead to loss of biomass and/or fragmentation. On the basis of remote sensing data at 30-meter spatial resolution, Matricardi et al. analyzed the extent of forest degradation across the entire Brazilian Amazon over a ∼22-year period up to 2014. They found that the extent and rate of forest degradation was equal to or greater than deforestation, which has important implications for carbon, biodiversity, and energy balance. Science , this issue p. [1378][1] [1]: /lookup/doi/10.1126/science.abb3021

Land Use Change in the Continental United States: Are There Tipping Points?

Land use in US is driven by multiple forces operating at the global level, as income and population growth, yield and productivity improvement, trade policy, climate change, and changing diets. Future land use have implications for biodiversity, run-off, carbon storage, ecosystem values, agriculture, and the broader economy. We investigate those forces in the US and their implications from a multisector, multisystem dynamics (MSD) perspective focused on understanding dynamics and resilience in complex interdependent systems. Historical trends show slightly increased grassland and natural forest areas and decreases in cropland. We project these trends are intensified under higher pressures for agriculture land or reduced under lower pressures, with no evidence of tipping points toward larger agricultural land abandonment or deforestation. However, US sectoral output and trade, fertilizer use, N2O and CH4 emissions from agriculture activities and CO2 emissions from land use changes are substantially impacted under several land use forcing scenarios.

What Will the Future Bring for Biological Invasions on Islands? An Expert-Based Assessment

Biological invasions are a major threat to global biodiversity with particularly strong implications for island biodiversity. Much research has been dedicated towards understanding historic and current changes in alien species distribution and impacts on islands and potential changes under future climate change. However, projections of how alien species richness and impacts on islands might develop in the future are still lacking. In the absence of reliable projections, expert-based assessments are a valuable tool to investigate the importance of different drivers and pathways and the distributions of potential impacts of future biological invasions. These insights can guide subsequent quantification efforts and inform invasive species management and policy. In this study, we performed a survey among 126 experts in invasion science ranging from scientists to managers and decision makers with a focus on island systems until the mid-21st century. The survey revealed that out of 15 drivers, six were considered important by almost all respondents (>90%). Of these, trade & transport was identified as most important at the introduction stage (99.2%) and land use/cover change as most important at the establishment (96.8%) and spread (95.2%) stage. Additionally, the experts considered that alien species were more likely to be introduced (93.7%) and spread (78.6%) as stowaways than through any other pathway. In general, respondents agreed that the impacts of alien species will increase on all types of islands, particularly on oceanic islands, followed by atolls and continental islands. Within islands, terrestrial ecosystems were assumed to be impacted more severely than marine ecosystems. Finally, the survey hints towards the potential for effective communication, scientific research and increased pro-active management of alien species on islands to reduce their future consequences. Given the major threat represented by invasive alien species on islands, these results provide crucial insights relevant for global and regional conservation efforts.

Spatial and Temporal Ecological Uniqueness of Andean Diatom Communities Are Correlated With Climate, Geodiversity and Long-Term Limnological Change

National Socio-Environmental Synthesis Center (SESYNC) from the US NSF DBI-1639145 National Geographic Society 8672-09 Comision Nacional de Investigacion Cientifica y Tecnologica (CONICYT) CONICYT FONDECYT LIFE14/IPE/FI/023 project FRESHABIT LIFE IP LIFE14/IPE/FI/023 National Science Foundation (NSF) EAR-1338694

Imidacloprid Movement into Fungal Conidia Is Lethal to Mycophagous Beetles.

Simple SummarySome insects are beneficial to plants because they eat pest insects and disease-causing fungi; integrating the use of these insects into pest management can help to reduce the need for costly pesticide applications. Twenty-spotted ladybeetles eat plant pathogenic fungi, which helps to reduce disease severity for many economically important crops. In this study, we applied a systemic insecticide to the roots of pumpkin plants and monitored to see if it would be detectable in the spores of a plant pathogenic fungus and whether the insecticide-tainted fungal spores would hurt the ladybeetle larvae. We were able to chemically detect the systemic insecticide in the fungal spores up to 21 days after the plants had been treated with the fungus. We found that the ladybeetles raised on infected plants that had been treated with the systemic insecticide died more rapidly that ladybeetles that had been raised on uninfected or untreated plants. This study is the first to show that systemic insecticides can move from the roots of a plant, into a plant pathogenic fungus, and then have negative effects on a fungus-eating insect. It suggests that growers and land managers need to carefully consider the unintended consequences of insecticide applications.Applications of systemic pesticides can have unexpected direct and indirect effects on nontarget organisms, producing ecosystem-level impacts. We investigated whether a systemic insecticide (imidacloprid) could be absorbed by a plant pathogenic fungus infecting treated plants and whether the absorbed levels were high enough to have detrimental effects on the survival of a mycophagous beetle. Beetle larvae fed on these fungi were used to assess the survival effects of powdery mildew and imidacloprid in a factorial design. Fungal conidia were collected from treated and untreated plants and were tested for the presence and concentration of imidacloprid. The survival of beetles fed powdery mildew from imidacloprid-treated leaves was significantly lower than that of the beetles from all other treatments. Imidacloprid accumulated in fungal conidia and hyphae was detected at levels considered lethal to other insects, including coccinellid beetles. Water-soluble systemic insecticides may disrupt mycophagous insects as well as other nontarget organisms, with significant implications for biodiversity and ecosystem function.

Quantifying factors for understanding why several small patches host more species than a single large patch

Several small habitat patches typically contain more species than a single large patch of comparable area. This pattern has fueled controversy over reserve design (the SLOSS debate); yet its causes remain poorly understood, limiting discussion of any broader biodiversity implications. Using 44 published faunal metacommunity datasets from fragments, islands and habitat islands, we test four hypotheses to explain differences in species richness (SRd) between several small patches and a single large patch: (i) beta diversity (BD); (ii) evenness of species abundance distributions (EV); (iii) size bias in sampling efficiency (SE); and (iv) taxonomy. We used individual-based null models and confirmatory path analysis to compare direct and indirect support for these non-exclusive hypotheses. Broad taxonomic grouping (invertebrates > birds = non-volant vertebrates) accounted for most of the variation in SRd, while BD, EV and SE had smaller, but comparable, direct effects (standardized coefficients = 0.42, 0.31 and −0.26 respectively). Within a taxonomic group, larger SRd occurred when both BD and EV increase. Although sampling bias probably overstates the difference in SRd, it does not explain the pattern. Beyond reserve design, the SLOSS pattern implies potential principles for managing biodiversity in fragmented landscapes. Whether this pattern should inform conservation requires greater understanding. We confirm beta diversity is the major contributor, but it is mediated by increases and decreases in evenness among small patches. Attention to how sub-division alters relative abundances (e.g., by biotic relaxation or altering competitive outcomes) might help clarify how the SLOSS pattern arises.

Governance of Land-based Negative-emission Technologies to Promote Biodiversity Conservation: Lessons from Australia

Climate change is a fundamental threat to biodiversity. Climate mitigation in general, and Negative-Emission Technologies (nets) in particular, have the potential to benefit biodiversity by reducing climate impacts. Domestic laws could help to ensure that nets have benefits for biodiversity adaptation to climate change (e.g. reducing land clearing and habitat loss and facilitating habitat restoration, corridors for species’ migration, and broader ecological resilience). Domestic laws will also need to govern trade-offs between nets and biodiversity adaptation (e.g. increased competition for land and landscape-scale fragmentation by new industrial developments and linear infrastructure). We argue that domestic laws should be used to maximize the benefits of nets while minimizing trade-offs for biodiversity. These laws should ensure that trade-offs are, at the very least, explicit and transparent, both in terms of their implications for current biodiversity and in the context of an acceleration of climate-driven biodiversity decline.