Cd Accumulation In Rice Grains Research Articles

Predicting accumulation of Cd in rice (Oryza sativa L.) and soil threshold concentration of Cd for rice safe production

Rice contamination by cadmium (Cd) poses a serious threat to human health, which has attracted widespread concerns in China. It is imperative to determine major soil factors influencing the accumulation of Cd in rice and develop prediction models to derive the threshold concentration of Cd in soil for rice food safety. In this study, the bioavailability, accumulation, and transfer of Cd in the 18 typical paddy soil-rice systems with a wide range of soil properties was investigated using pot experiments. The regression-based models incorporated with total or extractable Cd and soil properties were constructed to predict Cd content of rice grain. Pot experimental results indicated that rice showed a high accumulation potential for Cd, while rice grains grown in acid soils displayed larger Cd contents than those in neutral and alkaline soils. The pH and MnO content were major soil factors influencing the Cd accumulation of rice. Multiple regression models based on the total Cd, extractable Cd, pH, and MnO content in soils could well describe the Cd content in rice grain. Measured Cd content of rice grains from field samples demonstrated that the empirical models could quantitatively predict the Cd content of rice grains. The threshold concentrations of Cd in soils for rice food safety could be back-calculated by both EDTA-extractable and total Cd contents in soils. The EDTA-extractable Cd in soils could use as an indication to derive the threshold concentrations of Cd for rice food safety. In conclusions, multiple regression models proved reliable and practical in predicting Cd accumulation in rice grain. These empirical models could well predict the content of Cd in rice grain and deduce soil Cd threshold criteria. These results could help to quantitatively evaluate the health risk of Cd accumulation in rice crop and provide a useful reference for safe production of rice.

Reducing Cd accumulation in rice grain with foliar application of glycerol and its mechanisms of Cd transport inhibition

Excessive cadmium (Cd) in rice grain has become a major global public health problem. Here, the effect of foliar glycerol application on Cd accumulation in brown rice was examined. Various spraying concentrations of glycerol between 0.4mM and 50mM were investigated and the results showed that 0.8 mM was the best application concentration for decreasing Cd content in brown rice. After different application period experiment, filling stage was considered as the optimal spraying time. 0.4mM–5mM glycerol application one time at the filling stage could significantly reduce Cd concentration in brown rice by 28.5%–60.4%. Cd transport factors (the ratio of brown rice and flag leaf/node) were decreased by 48.5% and 27.3%, respectively, with glycerol application. Glycerol application also significantly increased Cd concentration in soluble fraction in flag leaf while reduced inorganic Cd and water-soluble Cd in both flag leaf and stem. Our results showed foliar spraying glycerol inhibited Cd transport to brown rice through Cd compartmentalisation in the vacuole and transformation of cadmium chemical form. This study may provide a new method to effectively alleviate the problem of excessive Cd in rice.

Silicon application improved the yield and nutritional quality while reduced cadmium concentration in rice.

Silicon (Si) is an essential nutrient for rice, but its effects on the yield and quality of rice under heavy metal stress remain uncertain. In this study, two typical paddy soils (acidic and calcareous purple soils) in the western region of Chongqing were selected for field plot experiment, with the purpose of understanding the effects of Si implementation methods on grain yields and cadmium (Cd) uptake, transport, and accumulation in the grain of a hybrid rice (Oryza sativa L, Changliangyou 772). Four treatments were set for the purposes including soil-based Si application, foliar spray of Si alone, foliar spray of selenium (Se)-containing Si fertilizer, and a control without Si application, respectively. The results indicated that the Si applications reduced Cd contents in brown rice by 11.45~51.85% in the slightly Cd-contaminated acidic purple soil (pH = 4.77, soil total Cd content 0.413 mg kg-1) and 26.93~43.77% in the purple calcareous paddy soil (pH = 7.77) with similar Cd-polluting levels. It is worth noting that the Cd content of conventional fertilized rice exceeds the Chinese National Food Safety Standard limit (0.2 mg kg-1, GB2762-2017) in the slightly Cd-contaminated acidic purple soil, and foliar spray treatments showed most effective effects that meets the safety threshold standard. Soil-based Si application reduced Cd accumulation in rice grains mainly by inhibiting the translocation of Cd from stem to the rice grain or root to stem, while foliar sprays of Si mainly by inhibiting the translocation of Cd from stem to brown rice. Si applications increased the rice yield by 17.15 to 25.45% in calcareous paddy soil with foliar spray being the best, while no significant yield increase was found in acidic paddy soil. Si and Se-containing Si fertilizer improved the nutritional quality of rice grain as indicated by the increases of Se, Si, and protein contents and the significant decreases of Cd contents in the rice grains. The comprehensive effects in improving the rice quality follow the order of foliar spray of Se-containing Si fertilizer > foliar spray of Si alone > soil-based Si application. Thus, foliar spray Si-containing fertilizer could be helpful in increasing rice yield while reducing the Cd uptake in rice grains, which might be a feasible approach in controlling Cd entry into the human body via crops.

Rice intercropping with alligator flag (Thalia dealbata): A novel model to produce safe cereal grains while remediating cadmium contaminated paddy soil

Phytoremediation has been employed as a cost-effective technique to remove the cadmium (Cd) from soil and water in several ecosystems. However, little is known about whether intercropping the remediating plants with rice (Oryza sativa) crop could reduce Cd accumulation in rice grains. We conducted greenhouse pot and concrete pond trials to explore the effects of intercropping alligator flag (Thalia dealbata, Marantaceae) on soil Cd remediation, paddy soil and microbial properties, and rice production. Our results suggest that intercropping with alligator flag significantly decreased Cd absorption, transportation, and accumulation from the soil to the rice grains (under 0.2 mg kg–1 at a soil Cd content below 2.50 mg kg–1). This decrease was due to the lowered Cd availability and higher soil pH in the rice-alligator flag intercropping system. Although planting alligator flag resulted in the reduction of soil NH4-N and NO3-N, Cd content in the rhizosphere was the main factor restricting microbial biomass, species, and community composition. Alligator flag could tolerate higher Cd contamination, and accumulate and stabilize more Cd in its tissues than rice. Our study suggests that alligator flag intercropped with rice has potential as a phytostabilization plant to produce rice safely for human consumption in moderately Cd-contaminated soils.

Overexpression of a Defensin-Like Gene CAL2 Enhances Cadmium Accumulation in Plants

Accumulation and detoxification of cadmium in rice shoots are of great importance for adaptation to grow in cadmium contaminated soils and for limiting the transport of Cd to grains. However, the molecular mechanisms behind the processes involved in this regulation remain largely unknown. Defensin proteins play important roles in heavy metal tolerance and accumulation in plants. In rice, the cell wall-localized defensin protein (CAL1) is involved in Cd efflux and partitioning to the shoots. In the present study, we functionally characterized the CAL2 defensin protein and determined its contribution to Cd accumulation. CAL2 shared 66% similarity with CAL1, and its mRNA accumulation is mainly observed in roots and is unaffected by Cd stress, but its transcription level was lower than that of CAL1 based on the relative expression of CAL2/Actin1 observed in this study and that reported previously. A promoter-GUS assay revealed that CAL2 is expressed in root tips. Stable expression of the CAL2-mRFP fusion protein indicated that CAL2 is also localized in the cell walls. An in vitro Cd binding experiment revealed that CAL2 has Cd chelation activity. Overexpression of CAL2 increased Cd accumulation in Arabidopsis and rice shoots, but it had no effect on the accumulation of other essential elements. Heterologous expression of CAL2 enhanced Cd sensitivity in Arabidopsis, whereas overexpression of CAL2 had no effect on Cd tolerance in rice. These findings indicate that CAL2 positively regulates Cd accumulation in ectopic overexpression lines of Arabidopsis and rice. We have identified a new gene regulating Cd accumulation in rice grain, which would provide a new genetic resource for molecular breeding.

Rice grains alleviate cadmium toxicity by expending glutamate and increasing manganese in the cadmium contaminated farmland

The accumulation of cadmium (Cd) in rice grains is closely associated with the content of mineral nutrients and amino acid metabolism, but the causal link among them is unclear. Profiles of amino acids (AAs) and quantities of essential nutrients in grains from early and late rice cultivars grown at four sites with different Cd levels were analyzed in the present study. Hazard quotients (HQs) for consumers by intake of rice from late cultivars were much higher than that from early cultivars at sites with soil Cd content of 0.25, 0.61 and 0.84 mg kg−1. Cadmium accumulation in grains resulted in a sharp reduction of total essential AAs and non-essential AAs in both early and late rice cultivars. High-Cd-accumulating (HCA) cultivars had significantly higher level of glutamate (Glu) than low-Cd-accumulating (LCA) cultivars when rice Cd content was less than 0.20 mg kg−1. However, Glu level in grains dramatically declined with the accumulation of Cd, which subsequently leaded to the reduction of other AAs. Cadmium content was well predicted by five amino acids (i.e., Glu, Alanine, Phenylalanine, Glycine and Threonine) or four essential elements (Ca, Fe, Mn and Zn) when rice Cd was less than 0.80 mg kg−1. Amino acids played more important roles than nutrients in Cd accumulation. When Cd content was in the range of 0.40–1.16 mg kg−1, the Mn content in rice increased significantly with the increase of Cd content, while the Glu content dropped down synchronously. Remarkably, the ratio between Mn and Glu displayed the highest direct path coefficient on Cd accumulation than any single cation or amino acid. These results indicate that high capacity in synthesizing Glu and concentrating Mn is the determinant factor for Cd accumulation in rice grains, and abundant Glu in aleurone layer may alleviate Cd toxicity by forming Glu-Cd complex.

Soil nutrients and heavy metal availability under long-term combined application of swine manure and synthetic fertilizers in acidic paddy soil

Fertilization is a vital approach to increase the crop yield by enhancing soil fertility, but some of the fertilizer sources such as pig manure contain non-essential toxic heavy metals, which can produce the environmental and public health risk. Therefore, the purpose of this study was to investigate the soil fertility and heavy metal pollution risk under long-term fertilization in acidic paddy soil. Fertilizer treatments that were arranged in randomized complete block design (RCBD) included CK (no fertilization), NK (inorganic nitrogen and potassium fertilization), NPK (inorganic NK and phosphorus fertilization), NPKM1 (70% of NPK and 30% pig manure application), NPKM2 (50% of NPK and 50% of pig manure application), and NPKM3 (30% of NPK and 70% of pig manure application). The rice grain yield and soil nutrient contents were highest under NPKM3 treatment. Long-term addition of manure significantly (P ≤ 0.05) increased soil pH and SOC content compared to the NPK fertilization. Soil available and total Cr, Cd, and Hg contents were highest under NPKM3 treatments, while soil total and available Pb content was significantly (P ≤ 0.05) higher under NPK treatment. Highest ecological risk (IR) was (1904) under NPK treatment and highest pollution load index (PLI) was 1.5 under NPKM3 treatment. Cd concentration in rice grain exceeded the maximum permissible limit of 0.1 mg kg−1 under combined application of manure and inorganic fertilization treatments. Grain Cr, Hg, and Pb contents were within safe limits of their concentration in all treatments. Moreover, biological accumulation coefficients of Cr, Cd, Hg, Pb, Zn, and Cu were highest under NPK treatment. Redundancy analysis (RDA) showed that soil pH and nutrient contents showed significant correlation with heavy metal concentrations in soil. Soil pH showed significant (P ≤ 0.05) positive effect on Cd accumulation in rice grain. Heavy metals in pig manure should be monitored before application to the field to reduce the risk of heavy metal pollution in soil and plant. Furthermore, combined application at the rate of 70% inorganic fertilization and 30% of manure could be better strategy to produce high crop yield with minimum risk of heavy metal contamination in soil and food crops.

Evaluation of cadmium (Cd) transfer from paddy soil to rice (Oryza sativa L.) using DGT in comparison with conventional chemical methods: derivation of models to predict Cd accumulation in rice grains.

The consumption of rice contaminated with soil cadmium (Cd) threatens human health. It is essential to ensure the production of rice that meets food quality standards. Therefore, a large-scale field survey was conducted in Zhejiang province, southeastern China, to investigate the relationship between Cd accumulation in rice grains and Cd bioavailability in soil, and thus to establish a model to predict Cd contents in rice grains based on soil properties. For this purpose, a total of 156 paired rice and soil samples were collected. Pearson's correlation analysis revealed that Cd measurements obtained by diffusive gradient in thin films (DGT) had a higher correlation (r = 0.818, p < 0.001) with the Cd in rice grains as compared to the Cd measured by the DTPA, CaCl2, EDTA, and HCl extraction methods, which indicated that the DGT technique was a reliable method for the assessment of Cd bioavailability in soils. In addition, among the four extraction methods, the DTPA-extractable Cd showed the highest correlation with the Cd contents in rice grains. Therefore, we developed two predictive models (modelDGT and modelDTPA) to predict Cd levels in rice grains via Cubist multivariate mixed linear regression, using "soil DGT-measured Cd, pH, and oxide contents of Ca, Si, and Fe" or "soil DTPA-extractable Cd, pH, OM, and oxide contents of Ca and Fe" as explanatory variables, respectively. The overall modelDGT and modelDTPA had R2 values of 0.95 and 0.93, respectively, and relative error values of 0.30 and 0.33, respectively. Simple correlation analysis showed direct and close relationships between the measured Cd in rice grains and the Cd concentrations predicted by the Cubist modelDGT and modelDTPA, with R2 values of 0.979 and 0.922, respectively. Therefore, Cd levels in rice grains could be predicted very well based on the two prediction models, and thus, the two models derived in this study are effective in identifying soils in which the Cd in rice grains will exceed food safety standards, thereby helping to ensure safe rice production.

Increased biomass and reduced tissue cadmium accumulation in rice via indigenous Citrobacter sp. XT1-2-2 and its mechanisms

Microbial remediation is a promising technique to remediate heavy metals contaminated soils. In this study, the cadmium (Cd)- resistant Citrobacter sp. XT1-2-2, isolated from heavy metals contaminated paddy soils, was investigated to evaluate the effect of this strain on soil Cd speciation, cellular Cd distribution, tissue Cd accumulation and rice biomass. The percentage of Cd2+ removal by Citrobacter sp. XT1-2-2 was up to 82.3 ± 2.1% within 240 min in the solution. The average content of soil soluble plus exchangeable and carbonate-bound fractions of Cd decreased, whereas Fe/Mn oxide-bound, organic matter-bound and residual fractions increased with bacteria inoculation. For the paddy soil inoculated with the XT1-2-2 strain, Cd concentrations of roots, culms, leaves and grains were significantly reduced by 24.1%, 46.9%, 41.5% and 66.7%, respectively. In addition, inoculation bacteria significantly increased the biomass of the roots, above-ground tissues and the rice grains. All results indicated that the XT1-2-2 strain had the ability to immobilize soil Cd and decrease Cd accumulation in rice grains. Therefore, the XT1-2-2 strain has potential for application to remediate Cd-contaminated paddy soils. It is possible to exploit a new bacterial-assisted technique for the remediation in Cd-contaminated paddy soils.

Dynamics and potential roles of abundant and rare subcommunities in the bioremediation of cadmium-contaminated paddy soil by Pseudomonas chenduensis.

Microbial bioremediation of heavy metal-contaminated soil is a potential technique to reduce heavy metals in crop plants. However, the dynamics and roles of the local microbiota in bioremediation of heavy metal-contaminated soil following microbial application are rarely reported. In this study, we used Pseudomonas chenduensis strain MBR for bioremediation of Cd-contaminated paddy soil and investigated its effects on the dynamics of the local soil bacterial community and Cd accumulation in rice. Cd accumulation in rice grains and roots were significantly reduced by the addition of the strain MBR. The addition of the strain MBR caused greater changes in bacterial communities in rhizosphere soil than in bulk soil. MBR enhanced the roles of microbial communities in transformation of Cd fractions, especially in rhizosphere soil. The strain MBR likely regulated abundant subcommunities more than rare subcommunities to improve Cd bioremediation, especially in rhizosphere soil. Consequently, the dynamics and functional roles of the local microbial communities differed significantly during bioremediation between abundant and rare subcommunities and between rhizosphere soil and bulk soil. This study provides new insight into the microbiota-related mechanisms underlying bioremediation.

Effects of an Amendment on Cadmium Transportation in the Rhizosphere Soil-Rice System

The remediation of cadmium (Cd) contaminated paddy soils has become an important issue in the field of remediation of agricultural soils contaminated by heavy metals. The iron (Fe) redox cycle (referring to the fluctuation of iron between the ferrous (Ⅱ) and ferric (Ⅲ) oxidation states) exhibits a unique role in the transportation of Cd in the soil-rice system. The exploration of practical remediation strategies for Cd from the perspective of the Fe redox cycle is expected to obtain some state-of-the-art technologies and products to reduce Cd accumulation in rice grains. In this study, an amendment was selected and a field experiment was carried out to investigate the effects of this amendment on Cd transportation from the rhizosphere soil to the Fe plaque, and further to different rice tissues at four different growth stages, and to highlight some possible mechanisms by which the Fe redox cycle controls Cd availability in rice paddy fields. The results showed that the amendment induced the formation of Fe sulfides, which co-precipitated with Cd, reducing the NH4Ac-extractable Cd content in rhizosphere soils at the tillering, jointing, and filling stages; the oxidation of Fe sulfides increased the NH4Ac-extractable Cd content in the rhizosphere soil at the maturing stage; the formation of Fe sulfides in rhizosphere soils impeded the migration of Fe(Ⅱ) from the rhizosphere soil to the root surface, decreasing the content of DCB-extractable Fe and Cd in Fe plaques at the tillering and filling stages; the amendment inhibited Cd transportation from the roots to other tissues, increasing the proportion of Cd in the roots at the jointing, filling, and maturing stages, but decreasing the proportion in the straws at the jointing, filling, and maturing stages, and in the rice grain at the maturing stage. These findings provide a theoretical basis for the exploration and application of the amendment, and have significance in the field of remediation of Cd-contaminated paddy soils.

Agronomic Management and Rice Varieties Controlling Cd Bioaccumulation in Rice.

Selection of rice varieties and application of amendments are effective measures to ensure food safety. Here we report that in the non-Cd area, the grain quality of all rice varieties met the Chinese National Grain Safety Standards (CNGSS). In the high-Cd area, rice varieties showed significant different bioaccumulation of Cd with lower rice yields than those in non-Cd area with the average decrease of 31.1%. There was a negative correlation between grain Cd content and yields. A total of 19 rice varieties were selected as low Cd accumulating rice varieties and their Cd content met CNGSS in the low-Cd area. Six of them met CNGSS in the high-Cd area. The application of amendments significantly reduced Cd content in rice grains by 1.0–84.7% with an average of 52.6% and 13 of varieties met CNGSS. The amendments reduced available Cd content in soils by 1.1–75.8% but had no significant effects on rice yields. Therefore, the current study implied that proper agronomic management with selection of rice varieties and soil amendments was essential in controlling Cd accumulation in rice grains.

Gene identification and transcriptome analysis of low cadmium accumulation rice mutant (lcd1) in response to cadmium stress using MutMap and RNA-seq

BackgroundCadmium (Cd) is a widespread toxic heavy metal pollutant in agricultural soil, and Cd accumulation in rice grains is a major intake source of Cd for Asian populations that adversely affect human health. However, the molecular mechanism underlying Cd uptake, translocation and accumulation has not been fully understood in rice plants.ResultsIn this study, a mutant displaying extremely low Cd accumulation (lcd1) in rice plant and grain was generated by EMS mutagenesis from indica rice cultivar 9311 seeds. The candidate SNPs associated with low Cd accumulation phenotype in the lcd1 mutant were identified by MutMap and the transcriptome changes between lcd1 and WT under Cd exposure were analyzed by RNA-seq. The lcd1 mutant had lower Cd uptake and accumulation in rice root and shoot, as well as less growth inhibition compared with WT in the presence of 5 μM Cd. Genetic analysis showed that lcd1 was a single locus recessive mutation. The SNP responsible for low Cd accumulation in the lcd1 mutant located at position 8,887,787 on chromosome 7, corresponding to the seventh exon of OsNRAMP5. This SNP led to a Pro236Leu amino acid substitution in the highly conserved region of OsNRAMP5 in the lcd1 mutant. A total of 1208 genes were differentially expressed between lcd1 and WT roots under Cd exposure, and DEGs were enriched in transmembrane transport process GO term. Increased OsHMA3 expression probably adds to the effect of OsNRAMP5 mutation to account for the significant decreases in Cd accumulation in rice plant and grain of the lcd1 mutant.ConclusionsAn extremely low Cd mutant lcd1 was isolated and identified using MutMap and RNA-seq. A Pro236Leu amino acid substitution in the highly conserved region of OsNRAMP5 is likely responsible for low Cd accumulation in the lcd1 mutant. This work provides more insight into the mechanism of Cd uptake and accumulation in rice, and will be helpful for developing low Cd accumulation rice by marker-assisted breeding.

A paddy field study of arsenic and cadmium pollution control by using iron-modified biochar and silica sol together.

Under flooded conditions in paddy soil, the mobility of As increases while the mobility of Cd decreases. The opposite geochemical behavior of As and Cd makes it difficult to reduce their mobilities simultaneously. Our recent study found that combined applications of biochar and zero-valent iron successfully reduced the mobilities of As and Cd simultaneously. On this basis, in the present study, an iron-modified biochar (Fe-BC) was developed, and its effect on decreasing the accumulations of As and Cd in rice was verified in a 2-year field trial. In addition, previous studies indicated that silicon fertilizer can also reduce As and Cd accumulation in rice grain. Hence, the effect of the combined or separate application of Fe-BC and silica sol on As and Cd accumulation in rice grain was investigated. Over the 2-year field trial, the grain yields decreased in the following order: iron-modified biochar plus silica sol (Fe-BC plus Si) > silica sol (Si) > Fe-BC > control (CK). Concentrations of As and Cd in brown rice were in the order: Fe-BC plus Si < Si ≈ Fe-BC < CK. The treatments of Fe-BC and Fe-BC plus Si significantly increased the soil pH and thus decreased available As and available Cd in the soil. In addition, significantly positive correlations between available As and As in brown rice and between available Cd and Cd in brown rice were found. In conclusion, co-application of iron-modified biochar and silica sol should be a recommended strategy to reduce the accumulation of As and Cd in rice grains.

Use of soil amendments to reduce cadmium accumulation in rice by changing Cd distribution in soil aggregates

The objectives of this study were to investigate the response of cadmium (Cd) distribution and stability in soil aggregates as affected by applying different amendments and to understand the relationship between changes in soil aggregates and alleviation of Cd phytotoxicity to rice after amendment application. In the present study, rice (Oryza sativa L.) was cultivated on a Cd-polluted soil. Five soil amendments were applied, which are as follows: rice husk biochar (BC), Fe-added rice husk biochar (Fe-BC), attapulgite-based mixture (AM), zeolite-based mixture (ZM), and cow manure-based mixture (MM). The effect on Cd redistribution in soil and Cd accumulation in rice plant was evaluated. The results showed that the five amendments applied at the rate of 3% (w/w) significantly increased soil pH and decreased Cd mobility in soil and Cd accumulation in rice plants. The reduction rate of Cd content in rice grains ranged from 41 to 62% after amendment application. The remediation efficiency of the different amendments for decreasing Cd accumulation in rice tissues followed the order of Fe-BC > MM > BC > ZM > AM. Adding amendments promoted the formation of large aggregates (0.2-2.0mm) with more mass loading of Cd and enhanced aggregate stability. Comparatively, Fe-BC was more effective than others for remediation of acid Cd-polluted paddy soil, as a significantly decreased Cd concentration in rice grain after its application was observed. Structural equation modeling (SEM) analysis revealed that DTPA-extractable Cd in small aggregates was the main factor affecting Cd accumulation in rice grain; soil pH directly affected aggregate stability; and aggregate stability was closely related to Cd availability in different size soil particles. These results indicated that the applied amendments were effective in reducing Cd bioavailability, most likely through raising the soil pH, improving aggregate stability, and re-distributing Cd from smaller soil aggregates to larger ones.

Reduction in cadmium accumulation in japonica rice grains by CRISPR/Cas9-mediated editing of OsNRAMP5

Cadmium (Cd) intake is harmful to human health and Cd contamination in rice grains represents a severe threat to those consuming rice as a staple food. Knockout of Cd transporters is a promising strategy to reduce Cd accumulation in rice grains. OsNRAMP5 is the major transporter for Cd and manganese (Mn) uptake in rice. Nevertheless, it is uncertain whether knockout of OsNRAMP5 is applicable to produce low Cd rice without affecting plant growth and grain yield. In this study, we adopted CRISPR/Cas9-based gene editing technology to knock out OsNRAMP5 in two japonica varieties. We generated three independent transgene-free osnramp5 mutants and investigated the effect of osnramp5 mutations on Cd accumulation and plant growth. Hydroponic experiments showed that plant growth and chlorophyll content were significantly reduced in osnramp5 mutants at low Mn conditions, and this defective growth in the mutants could be fully rescued by supply of high levels of Mn. Cd and Mn accumulation in both roots and shoots was markedly reduced in the mutants compared to that in wild-type plants. In paddy field experiments, although Cd in flag leaves and grains was greatly reduced in osnramp5 mutants, some agronomic traits including plant height, seed setting rate, and grain number per panicle were affected in the mutants, which ultimately caused a mild reduction in grain yield. The reduced plant growth in the mutants can be attributed to a marked decrease in Mn accumulation. Our results reveal that the manipulation of OsNRAMP5 should be treated with caution: When assessing the applicability of osnramp5 mutants, soil pH and soil water content in paddy fields need to be taken into consideration, since they might affect the levels of available Mn in the soil and consequently determine the effect of the mutation on grain yield.

Soil liming effects on CH4, N2O emission and Cd, Pb accumulation in upland and paddy rice

Keeping in view the expanding environmental pollution and irrigation water deficit, a pot experiment was performed for the upland (Huyou2, Hanyou737) and paddy rice cultivars (Taigeng8; Yixiang2292), to study soil liming effects on methane (CH4) and nitrous oxide (N2O) emission, bioavailability and accumulation of Cd, Pb in upland and paddy rice. Upland rice reduced 90% of soil CH4 emission as compared to paddy conditions. Soil CH4 emission decreased by 45% and 39% with dolomite, and it reduced by 35% and 33% with lime treatment both in upland and paddy conditions, respectively. Soil N2O emission decreased by 44% and 52% with dolomite, and with the lime application, it was reduced by 37% and 44% for both upland and paddy conditions respectively. Reduction in soil DTPA-extractable Cd was between 37-53% and 43–80% with dolomite and 16–37% and 24–72% Cd decreased with lime application in upland and paddy conditions respectively. Soil DTPA-extractable Pb reduced by 27–44% and 25–53% with dolomite and 16–40% and 11–42% with soil-applied lime in upland and paddy conditions, respectively. Cd accumulation in rice grain was decreased by 47–88% and 62–79% with dolomite and 31–86% and 45–52% reduction by lime application in upland and paddy rice respectively. Rice grain Pb reduced by 58–91% and 66–78% with dolomite application and 32–71% and 44–71% with lime in upland and paddy rice, respectively. Our results showed that soil liming significantly reduced soil N2O and CH4 emission and Cd, Pb accumulation in rice grain, but dolomite was more effective as compared to lime. Altogether, results of this study suggest that upland rice can be cultivated in CdPb polluted soils with least soil CH4 emission. Cd and Pb toxicity, accumulation, and N2O emission in upland rice can be minimized by soil liming of 3 g kg−1 and optimizing the nutrients composition of the soil.

Alleviating the Cadmium Toxicity and Growth‐Promotion in Paddy Rice by Photosynthetic Bacteria

Cadmium (Cd) accumulation in rice and its subsequent transfer to food chain has become a major environmental issue worldwide. Low growth in plants and high toxicity toward the living organism are major drawbacks associated with Cd contamination. Effective immobilization and reducing Cd uptake by rice grains can be promising strategies to minimize its toxicity. Here, the authors report an effective method for Cd immobilization by inoculating photosynthetic bacteria known as Rhodopseudomonas palustris (RP) in the soils, which is verified through pot and field experiments. The pot experiment indicated that high Cd contamination in control soils inhibited plant growth and decreased the biomass massively in paddy rice. Bacterial immobilization of Cd not only inhibited its uptake by plants but also increased fresh weight of rice seedlings under low Cd concentration (40 mg kg−1 soil). However, under high Cd concentration (80 mg kg−1), Bacillus subtilis enhanced the activity of RP for reducing the Cd uptake and subsequent accumulation in rice grains (from 0.65 to 0.19 mg Cd kg−1) to below the standard limits (0.2 mg kg−1). Field experiments showed that Cd prefers to accumulate in the root region, and the transmission process through roots, stems, and leaves are restricted for ultimately decreasing the Cd accumulation in rice grains. In natural soil with low Cd contamination, the rice grains can be safely edible. These findings will assist to minimize the Cd toxicity in human health and to address the food safety challenges of modern world.

Effect of sulfur and sulfur-iron modified biochar on cadmium availability and transfer in the soil–rice system

Cadmium (Cd) contamination in paddy soils has aroused global concern. Sulfur modified biochar (BC) could combine the benefits of BC and S for Cd remediation. However, no information is available on the impact of sulfur modified biochar on Cd phytoavailability in paddy soils. In this study, a pot experiment was conducted to investigate the effect of sulfur modified biochar (S-BC) and sulfur and iron (Fe) modified biochar (S-Fe BC) on Cd mobility and Cd transfer in the soil-rice system. The application of S-BC and S-Fe BC effectively reduced pore water Cd in the rhizosphere and non-rhizosphere pore water throughout the rice growth stages. S-BC and S-Fe BC addition increased the total chlorophyll content, as well as the root, shoot and grain biomasses of rice. Furthermore, S-BC and S-Fe BC amendments greatly increase the formation of Fe plaque on rice root surface, thus decreasing Cd accumulation in different rice tissues. In particular, S-Fe BC supplementation significantly reduced the Cd concentration in rice grains to 0.018 mg kg−1 in Cd-contaminated soil, which was lower than the China National standard for food contamination limit (0.2 mg kg−1 Cd). Sequential extraction results showed that S-BC and S-Fe BC can promote the transfer of exchangeable Cd to Fe-Mn oxide, organic and residual bound forms which reduce Cd in paddy soils. Thus, the amendment of S-Fe BC to Cd-contaminated paddy soil is an effective strategy to decrease Cd accumulation in rice grains and thereby protect public health.

Identification of QTLs and Validation of qCd-2 Associated with Grain Cadmium Concentrations in Rice

Cadmium (Cd) is one of heavy metals harmful to human health. As rice is the main staple food in Asia and Cd is easily contaminated in rice, the molecular regulation of Cd accumulation should be explored. In this study, a recombinant inbred population derived from Xiang 743/Katy was grown in Cd-polluted fields and used to map the quantitative trait loci (QTLs) for Cd accumulation in rice grains. We identified seven QTLs distributed on chromosomes 2, 3, 6, 7, 8 and 10. These QTLs displayed phenotypic variances of 58.50% and 40.59% in 2014 and 2015, respectively. Two QTLs, qCd-2 and qCd-7, were identified in both the two years. qCd-2 was detected on the interval of RM250–RM207 on chromosome 2, with an LOD of 2.51 and a phenotypic contribution of 13.75% in 2014, and an LOD of 3.35 and a phenotypic contribution of 14.16% in 2015. qCd-7 co-localized with the cloned qCdT7 on chromosome 7 and may represent the correct candidate. The other five QTLs were detected only in one year. To further confirm the effects of qCd-2, a residual heterozygous line designated as RHL945, with a heterozygous interval of RM263–RM207 on chromosome 2, was selected from the recombinant inbred population and used to develop an F2 population consisting of 155 individual plants. By incorporating further simple sequence repeat markers into the segmental linkage map of the target region, qCd-2 was delimited in the interval of RM5404–RM3774, with an LOD value of 4.38 and a phenotypic contribution of 15.52%. These results reflected the genetic regulation of grain Cd in rice and paved the way for the future cloning of qCd-2.