The intricate oceanic climate interactions with terrestrial primary production of Asian ecosystems exert crucial social-economical-environmental repercussions. Yet, a holistic understanding of tropical sea surface temperature (SST) anomalies associated with the gross primary productivity (GPP) variations of monsoon-Asia remains constrained. This study provides a statistical framework demonstrating how SST perturbations in the tropics influence GPP fluctuations in monsoon-Asia by modulating hydrothermal conditions of different climate system components. Observation evidence explicitly illustrated the characteristic anomalous SST signatures of positive and negative GPP anomalies in South and Southeast Asia during June–August. The SST anomalies of the central-eastern tropical Pacific showed a robust negative impact on the GPP variability of South-Asia. The GPP alterations in maritime-Southeast-Asia exhibited strong connections with SST anomalies of the western Pacific (positive) and eastern equatorial Pacific (negative). The oceanic signals in the GPP variability of South-Asia and maritime-Southeast-Asia mirrored canonical El Niño and La Niña patterns. The detected SST–GPP link is feasible through large-scale atmospheric circulation variability and the consequent regional modulation of heat and moisture fluxes. The anomalous strengthening (weakening) of Walker cell enhances (reduces) water availability to plants for photosynthesis during the La Niña (El Niño) phase of the ENSO cycle and thus elevates (lowers) GPP in South-Asia and Maritime-southeast-Asia. In contrast, the enhanced GPP anomaly in mainland-Southeast-Asia depicts signs of canonical La Niña and Indian Ocean subtropical dipole (IOSD) teleconnections. The positive impact of IOSD was through the modulation of the Mascarene High and the consequent impact on the monsoon. Meanwhile, decreased GPP bears the imprint of El Niño Modoki and warm tropical Indian Ocean SSTs. The atmospheric teleconnections demonstrated the delayed impact of El Niño Modoki on GPP variability through the Indian Ocean capacitor effect. Our findings could be instrumental in forecasting the probable effects on vegetation growth in monsoon-Asia associated with high-frequency tropical oceanic changes.