This study aimed to develop and characterize the chitosan bionanoconjugates (BNCs) loaded with zinc (Zn) and salicylic acid (SA) and test their efficacy on wheat seed exposed to chilling stress. BNCs developed were spherical (480 ± 6.0 nm), porous, and positively charged (+25.2 ± 2.4 mV) with regulated nutrient release properties. They possessed complexation efficiency of 78.4 and 58.9 % for Zn, and SA respectively. BET analysis further confirmed a surface area of 12.04 m2/g. Release kinetics substantiated the release rates of Zn and SA, as 0.579 and 0.559 % per hour, along with a half-life of 119.7 and 124.0 h, respectively. BNCs positively affected the germination potential of wheat seeds under chilling stress as observed by significantly (p < 0.05) reduced mean emergence time (18 %), and increased germination rate (22 %), compared to the control. Higher activities of reserve mobilizing enzymes (α-amylase- 6.5 folds, protease −10.2 folds) as well as faster reserve mobilization of starch (64.4 %) and protein (63.5 %) molecules were also observed. The application further led to increased levels of the antioxidant enzymes (SOD and CAT) and reduced oxidative damage (MDA and H2O2). Thus, it is inferred that the developed BNCs could help substantially improve the germination and reserve mobilization potential, thereby increasing the crop yield.