Soybean Research Articles

Soil solarisation delivers near zero levels of Fusarium pseudograminearum in cereal crown rot reference sites

The development of commercial varieties that are resistant or tolerant to crown rot caused by Fusarium species is an important goal for cereal breeding programs internationally. Ideally, this research requires experimental sites that are initially free from Fusarium in order to establish treatment plots that compare growth in the presence and absence of these soil- and stubble-borne pathogens. Specifically, the assessment of tolerance requires control plots free of disease to determine the reduction in crop yield in plots where the disease is present. The ability of soil solarisation to reduce the background Fusarium pseudograminearum level occurring at experimental sites in comparison to current stubble management techniques was investigated across three field trials at Wellcamp in Queensland. Stubble from a susceptible durum (Triticum turgidum ssp. durum) cultivar inoculated with F. pseudograminearum was incorporated by cultivation into the trial sites to establish a significant background level of inoculum prior to the application of all subsequent treatment plots. In these trials, solarisation over a period of twelve weeks reduced the presence of F. pseudograminearum to low detection levels when compared to the traditional crown rot management techniques of cultivation or growth of the non-host cover crops mungbean (Vigna radiata) and soybean (Glycine max). No negative effects of solarisation were observed on a subsequent crop of bread wheat (Triticum aestivum), with significantly higher yields observed in the solarised treatments. Solarisation has the potential to deliver near zero level crown rot reference sites for experimental purposes in one short application between cropping seasons.

Nutrient Chemical Forms, Storage Effects and Phyto-Toxicity of Organic Fertilizers to Selected Cereal and Legume Crops

The study aims to determine the nutrient chemical forms, storage effects, and phytotoxicity of fertilizers made from nutrient-rich materials and municipal organic waste in order to control the impact of farming practices on the ecology. Laboratory-scale experiments were conducted at 3-month intervals over a period of 15 months to determine the binding forms of phosphate and nitrogen, and other quality parameters of fertilizers. The germination index (GI) method was used to assess the phytotoxicity of the fertilizers at three different rates of applications- 2.0, 2.5, and 3.0 tonnes ha−1 on maize (Zea mays L.) and soybean (Glycine max). It was found that animal-based and organic mixture fertilizers had the highest levels of ammoniacal nitrogen and nitrate: NH4 +-N (0.3 ± 0.0%) and NO3-N (0.7 ± 0.0%), respectively. Rock-based fertilizer had the highest levels of water-soluble (7.0 ± 0.0%) and neutral ammonium citrate soluble (4.1 ± 0.0%) forms of nitrogen and potassium, which are readily available to crops. The GI values of the fertilizers were generally above the safety standard of ≥80, except for synthetic fertilizer when applied on soybeans at 3.0 tonnes ha−1 (74.2). While organic fertilizers were deemed safe for application on the test crops, it is advised to avoid storing the fertilizers for an extended period of time due to potential chemical and biological changes that might affect the biome.

Similarity recognition approach to identify zero-added MSG soy sauce using stable isotopes and amino acid profiles

Seasonings such as naturally fermented soy sauce without added monosodium glutamate (MSG), are currently a growth market in China. However, fraudulent and mislabeled zero-added MSG soy sauce may cause a risk of excessive MSG intake, increasing food safety issues for consumers. This study investigates stable carbon and nitrogen isotopes and 16 amino acids in typical Chinese in-market soy sauces and uses a similarity method to establish criteria to authenticate MSG addition claims. Results reveal most zero-added MSG soy sauces had lower δ13C values (−25.2 ‰ to −17.7 ‰) and glutamic acid concentrations (8.97 mg mL−1 to 34.76 mg mL−1), and higher δ15N values (−0.27 ‰ +0.95 ‰) and other amino acid concentrations than added-MSG labeled samples. A combined approach, using isotopes, amino acids, similarity coefficients and uncertainty values, was evaluated to rapidly and accurately identify zero-added MSG soy sauces from MSG containing counterparts.

Agronomic Characteristics of Various Soybean Varieties (Glycine max L.) Can Grow and Produce Due to Shade Stress

Agronomic Characteristics of Various Soybean Varieties (Glycine max L.) Can Grow and Produce Due to Shade Stress

Chemical Composition of Five Lamiaceae Essential Oils and Their Insecticidal and Phytotoxic Activity.

The Lamiaceae family is widely distributed worldwide. In this study, we investigated the insecticidal activity of five Lamiaceae essential oils against Thrips flavus Schrank and the phytotoxic activity against Glycine max (L.) Merr., Zea mays L., Portulaca oleracea L., and Echinochloa oryzoides (Ard.) Fritsch. Then, the chemical composition of the five essential oils was analyzed by using gas chromatography-mass spectrometry (GC-MS). The five Lamiaceae essential oils were melissa, basil, rosemary, negundo chastetree, and salvia. The main constituents of the five Lamiaceae essential oils were preliminarily determined to be as follows: α-pinene and 1,8-cineole in the rosemary essential oil; β-pinene, γ-terpinene, and d-limonene in the negundo chastetree essential oil; β-cadinene and isolongifolen-5-one in the melissa essential oil; 5-allylguaiacol in the basil essential oil; and isopropyl myristate, linalyl acetate, and linalool in the salvia essential oil. Using a bioassay, it was found that, among the five essential oils, the melissa essential oil exhibited the lowest LC50 value, which was 0.18 mg/mL, and the salvia essential oil exhibited the highest LC50 value, which was 0.42 mg/mL. The control efficacy of the five essential oils significantly increased with time and concentration in pot experiments. The negundo chastetree, basil, rosemary, and salvia essential oils at 900.00 g a.i.·hm-2 showed high control efficacy against T. flavus, with values higher than 90%. Female thrips were attracted to the negundo chastetree essential oil. The five essential oils were also tested for their effects on the germination rate, germination potential, germination index, and shoot length of G. max, Z. mays, P. oleracea, and E. oryzoides. The basil essential oil significantly inhibited the germination of P. oleracea, with germination at a concentration of 1.0 mg/mL being only 11.11 ± 5.09%. This study provides a reference for the development of botanical pesticides to control T. flavus, crops, and weeds.

Impact of genotypic mixture on soybean (Glycine max) pest population

An experiment was conducted during rainy (kharif) seasons of 2018 and 2019 at the ICAR-Indian Institute of Soybean Research, Indore, and Madhya Pradesh to study the impact of genotypic mixture on soybean [Glycine max (L.) Merr.] pest population. A total of 16 soybean genotypes and 4 genotypic mixtures were evaluated for relative efficacy in management of insect-pests of soybean. Among the 20 treatments, the plots with genotypic mixtures had lowest population of Spodoptera exigua Hubner and at par with each other. In case of Spodoptera litura Fabricius, tussock moth, blue beetle and grey weevil management, a mixture of the genotypes JS-9560, JS-20-34, MAUS-47 and MACS-1460 was found most effective treatment. The plots with the genotypic mixtures of NRC-37, JS-9752, RSC-1046 and RKS-113 supported the least population of semiloopers. However, lowest population of leaf miner and girdle beetle was recorded in plots of JS-20-34 while the least population of stem fly was recorded in RSC-1046. The differences observed due to the genotypic combinations may be used for developing inset-pest management programmes in soybean.

Host Preference and Developmental Dynamics of Fall Armyworm <i>Spodoptera frugiperda</i> (J E Smith)

The invasive fall army worm Spodoptera frugiperda (J E Smith) is a major global agricultural pest, originally from tropical and subtropical America, now affecting over 80 plant species across Africa, Asia, and beyond. This study examines its host preferences and developmental dynamics, focusing on four host plants: Zea mays L., Glycine max L., Carica papaya L., and Brassica oleraceae var. acephala L. Using a complete randomized design, mortality and developmental rates of larvae were evaluated. These results revealed that C. papaya and B. oleraceae leaves resulted in maximum larval mortality (80 and 65%, respectively). This can be attributed to the presence of secondary metabolites like tannins, terpenoids, flavonoids, and alkaloids, which exhibit toxic and antifeedant properties. This study highlights the armyworm's ability to adapt to alternative hosts like G. max and B. oleraceae, even surviving on C. papaya leaves, typically used as a botanical pesticide.

FatPlants: a comprehensive information system for lipid-related genes and metabolic pathways in plants.

FatPlants, an open-access, web-based database, consolidates data, annotations, analysis results, and visualizations of lipid-related genes, proteins, and metabolic pathways in plants. Serving as a minable resource, FatPlants offers a user-friendly interface for facilitating studies into the regulation of plant lipid metabolism and supporting breeding efforts aimed at increasing crop oil content. This web resource, developed using data derived from our own research, curated from public resources, and gleaned from academic literature, comprises information on known fatty-acid-related proteins, genes, and pathways in multiple plants, with an emphasis on Glycine max, Arabidopsis thaliana, and Camelina sativa. Furthermore, the platform includes machine-learning based methods and navigation tools designed to aid in characterizing metabolic pathways and protein interactions. Comprehensive gene and protein information cards, a Basic Local Alignment Search Tool search function, similar structure search capacities from AphaFold, and ChatGPT-based query for protein information are additional features. Database URL: https://www.fatplants.net/.

Resistance to protoporphyrinogen oxidase inhibitors in giant ragweed (Ambrosia trifida).

Giant ragweed (Ambrosia trifida L.) is one of the most troublesome weed species in corn (Zea mays L.) and soybean [Glycine max (L.) Merr.] cropping systems. Following numerous reports in 2018 of suspected herbicide resistance in several Ambrosia trifida populations from Wisconsin, our objective was to characterize the response of these accessions to acetolactate synthase (ALS), enolpyruvyl shikimate phosphate synthase (EPSPS), and protoporphyrinogen oxidase (PPO) inhibitors applied POST. Four accessions (AT1, AT4, AT6, and AT10) exhibited ≥ 50% plant survival after exposure to the cloransulam 3× rate. Two accessions (AT8 and AT10) and one accession (AT2) exhibited ≥ 50% plant survival after exposure to glyphosate and fomesafen 1× rates, respectively. The AT10 accession exhibited multiple resistance to cloransulam and glyphosate. The AT12 accession was 28.8-fold resistant to fomesafen and 3.7-fold resistant to lactofen. A codon change in PPX2 conferring a R98L substitution was identified as the most likely mechanism conferring PPO-inhibitor resistance. To our knowledge, this is the first confirmed case of PPO-inhibitor resistance in Ambrosia trifida globally and we identified the genetic mutation likely conferring resistance. Proactive and diversified integrated weed management strategies are of paramount importance for sustainable long-term Ambrosia trifida management. © 2024 The Author(s). Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.

DELINEATING GENETIC DIVERSITY IN SOYBEAN (GLYCINE MAX L.) GENOTYPES: INSIGHTS FROM A-PAGE ANALYSIS OF GLOBULIN RESERVE PROTEINS

This study explores the genetic diversity of soybean (Glycine max) genotypes using polyacrylamide gel electrophoresis (A-PAGE) to analyze globulin reserve proteins. The research utilized 51 soybean genotypes from various origins, including Canada, Turkey, Uzbekistan and others. The A-PAGE method was employed to extract and analyze the globulin storage proteins in the grains of soybean samples. The proteins were categorized into ω, γ, β and α zones, revealing distinct electrophoretic patterns among the genotypes. A total of 22 spectra and 107 patterns were identified, demonstrating polymorphism based on the frequency of occurrence. The genetic diversity index, calculated using Nei’s formula, indicated varying levels of genetic diversity across the different zones.

Crystal structure of Kunitz-type trypsin inhibitor: Entomotoxic effect of native and encapsulated protein targeting gut trypsin of Tribolium castaneum Herbst

Trypsin inhibitors are known to act against insect pests by inhibiting proteases of the digestive tract. In this study, we report structural and functional characterization of ∼ 19 kDa Albizia procera Kunitz-type trypsin inhibitor (ApKTI) protein with potential bio-insecticidal applications. Crystal structure of ApKTI protein has been refined to 1.42 Å and molecular structure (8HNR) showed highly beta sheeted conformation including 12 beta sheets, 15 loops and two small alpha helices. Docking between predicted model of Tribolium castaneum trypsin (TcPT) and 8HNR produced a stable complex (−11.3 kcal/mol) which reflects the inhibitory potential of ApKTI against insect gut trypsin. Significant mortality was observed in all life stages of T. castaneum including egg, larvae, pupae and adults with a 3.0 mg native ApKTI treatment in comparison to negative control. Although standard trypsin inhibitor (Glycine max trypsin inhibitors; GmKTI; 3.0 mg) produced maximum reduction against all above life stages; however, a non-significant mortality difference was observed in comparison to 3.0 mg native ApKTI. The study further explores the synthesis and characterization of Graphene (GNPs) and Zinc oxide (ZnONPs) nanoparticles, followed by the optimization of ApKTI and GmKTI loading on both nanoparticles to evaluate their enhanced insecticidal effectiveness. Encapsulated proteins showed significant mortality against T. castaneum across all concentrations, with GNPs proving more effective than ZnONPs. Additionally, encapsulated GmKTI produced significant mortality of eggs compared to loaded ApKTI treatments while other life stages were non-significantly affected by two proteins. This research highlights the importance of encapsulated ApKTI protein for eco-friendly pest management strategies.

Duplication and sub-functionalization of flavonoid biosynthesis genes plays important role in Leguminosae root nodule symbiosis evolution.

Gene innovation plays an essential role in trait evolution. Rhizobial symbioses, the most important N2-fixing agent in agricultural systems that exists mainly in Leguminosae, is one of the most attractive evolution events. However, the gene innovations underlying Leguminosae root nodule symbiosis (RNS) remain largely unknown. Here, we investigated the gene gain event in Leguminosae RNS evolution through comprehensive phylogenomic analyses. We revealed that Leguminosae-gain genes were acquired by gene duplication and underwent a strong purifying selection. Kyoto Encyclopedia of Genes and Genomes analyses showed that the innovated genes were enriched in flavonoid biosynthesis pathways, particular downstream of chalcone synthase (CHS). Among them, Leguminosae-gain type Ⅱ chalcone isomerase (CHI) could be further divided into CHI1A and CHI1B clades, which resulted from the products of tandem duplication. Furthermore, the duplicated CHI genes exhibited exon-intron structural divergences evolved through exon/intron gain/loss and insertion/deletion. Knocking down CHI1B significantly reduced nodulation in Glycine max (soybean) and Medicago truncatula; whereas, knocking down its duplication gene CHI1A had no effect on nodulation. Therefore, Leguminosae-gain type Ⅱ CHI participated in RNS and the duplicated CHI1A and CHI1B genes exhibited RNS functional divergence. This study provides functional insights into Leguminosae-gain genetic innovation and sub-functionalization after gene duplication that contribute to the evolution and adaptation of RNS in Leguminosae.

Quantitative phenotyping of crop roots with spectral electrical impedance tomography: a rhizotron study with optimized measurement design

BackgroundRoot systems are key contributors to plant health, resilience, and, ultimately, yield of agricultural crops. To optimize plant performance, phenotyping trials are conducted to breed plants with diverse root traits. However, traditional analysis methods are often labour-intensive and invasive to the root system, therefore limiting high-throughput phenotyping. Spectral electrical impedance tomography (sEIT) could help as a non-invasive and cost-efficient alternative to optical root analysis, potentially providing 2D or 3D spatio-temporal information on root development and activity. Although impedance measurements have been shown to be sensitive to root biomass, nutrient status, and diurnal activity, only few attempts have been made to employ tomographic algorithms to recover spatially resolved information on root systems. In this study, we aim to establish relationships between tomographic electrical polarization signatures and root traits of different fine root systems (maize, pinto bean, black bean, and soy bean) under hydroponic conditions.ResultsOur results show that, with the use of an optimized data acquisition scheme, sEIT is capable of providing spatially resolved information on root biomass and root surface area for all investigated root systems. We found strong correlations between the total polarization strength and the root biomass (R2=0.82\\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{upgreek} \\setlength{\\oddsidemargin}{-69pt} \\begin{document}$$R^2 = 0.82$$\\end{document}) and root surface area (R2=0.8\\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{upgreek} \\setlength{\\oddsidemargin}{-69pt} \\begin{document}$$R^2 = 0.8$$\\end{document}). Our findings suggest that the captured polarization signature is dominated by cell-scale polarization processes. Additionally, we demonstrate that the resolution characteristics of the measurement scheme can have a significant impact on the tomographic reconstruction of root traits.ConclusionOur findings showcase that sEIT is a promising tool for the tomographic reconstruction of root traits in high-throughput root phenotyping trials and should be evaluated as a substitute for traditional, often time-consuming, root characterization methods.

Exploring Resveratrol Intervention in Managing Menopausal Symptoms: A Comprehensive Systematic Review of Clinical Trials

Introduction: Menopause, a significant event in a woman's reproductive lifespan, entails hormonal changes and a range of symptoms affecting various bodily systems. Conventional treatments like hormone replacement therapy (HRT) have limitations and associated risks, prompting interest in alternative therapies such as resveratrol. Materials/Methods: The literature search was conducted in six databases. The outcome of interest measures the mean changes in bone mineral density (BMD), Quality of Life (QoL), bone biomarkers, menopause symptoms, and cognitive and mood functions pre- and post-interventions. Resveratrol was administered in various forms and doses, including trans-resveratrol 75 mg twice or once daily, 250/500/1000 mg resveratrol tablets, and a combination of fermented soy containing 10 mg equol and 25 mg resveratrol. Quality appraisal was done using the Cochrane Risk of Bias Tool 2. Results: Resveratrol supplementation in post-menopausal women, involving 745 participants across various studies, has shown remarkable health benefits. These include improved cerebral vasoreactivity (CVR) to hypercapnia, a 10% decrease in overall pain, and enhanced quality of life. Additionally, resveratrol boosts flow-mediated dilation (FMD) by 23% and increases serum sex hormone-binding globulin (SHBG) concentrations by 10%, benefiting bone mineral density (BMD). Over the long term, it leads to a significant 35% increase in FMD and a substantial 33% enhancement in overall cognitive performance, highlighting its diverse benefits. Conclusion: For women in the post-menopausal stage, resveratrol supplementation shows potential for improving cardiovascular health, relieving pain, enhancing quality of life, supporting bone health, boosting cognitive function, and promoting overall mental well-being.

A novel ACE inhibitory peptide from Douchi hydrolysate: Stability, inhibition mechanism, and antihypertensive potential in spontaneously hypertensive rats

Angiotensin I-converting enzyme (ACE) regulates blood pressure through the renin-angiotensin system. Douchi, a traditional fermented soybean condiment, may have antihypertensive effects, but research on ACE inhibitory peptides from Douchi hydrolysates is limited. We hypothesized that enzymatic treatment could enhance ACE inhibitory peptide diversity and efficacy. We tested ten single enzymes and four combinations, finding pepsin-trypsin-chymotrypsin most effective. Hydrolysates were purified using Sephadex G-15 and reversed-phase HPLC, and peptides were identified via LC-MS/MS. Five peptides (LF, VVF, VGAW, GLFG, NGK) were identified, with VGAW as the most potent ACE inhibitor (IC50 46.6 ± 5.2 μM) showing excellent thermal and pH stability. Lineweaver-Burk plots confirmed competitive inhibition, and molecular docking revealed eight hydrogen bonds between VGAW and ACE. In hypertensive rats, VGAW significantly reduced blood pressure at 12.5, 25, and 50 mg/kg. These findings highlight Douchi as a source of ACE inhibitory peptides and suggest VGAW as a promising functional food ingredient.

GmIRT1.1 from soybean (Glycine max L.) is involved in transporting Fe, Mn and Cd

Soybean is one of the most important crops for producing high quality oil and protein. Mineral nutrient deficiencies are frequently observed in soybeans. However, there are few studies to understand the absorption process of mineral nutrients in soybeans. Here, we investigated the functions of soybean (Glycine max L.) IRT1.1 (IRON-REGULATED TRANSPORTER 1.1) in the transportation of mineral elements. Heterologous expression of GmIRT1.1 in yeast mutants revealed that GmIRT1.1 compensated for the growth defects of Δfet3fet4 and Δsmf1 mutants under iron (Fe) and manganese (Mn) deficiency conditions, respectively, and enhanced the sensitivity of the Δycf1 mutant to cadmium (Cd) toxicity. Expression analysis revealed that GmIRT1.1 was only significantly induced by Fe deficiency and was primarily expressed in roots. Furthermore, the GmIRT1.1 overexpression lines enhanced Arabidopsis tolerance to Fe deficiency, leading to increased accumulation of Fe in the roots and shoots. Additionally, the transgenic lines increased the sensitivity to Mn and Cd toxicity. Subcellular localization analysis revealed that GmIRT1.1 was localized on the plasma membrane. Moreover, the results obtained from the soybean hairy roots system indicated that the localization of GmIRT1.1 was dependent on the regulation of Fe homeostasis in plant. Consequently, these results suggested that GmIRT1.1 was responsible for the transportation of Fe, Mn and Cd.

Protein Adequacy, Plant Protein Proportion, and Main Plant Protein Sources Consumed Across Vegan, Vegetarian, Pescovegetarian, and Semivegetarian Diets: A Systematic Review

BackgroundThere are several types of plant-based diets, with unknown differences across diets on total/plant protein intake and variety of plant protein sources consumed. ObjectivesThis systematic review aimed to compare total protein intake, proportion of plant proteins, and main plant protein sources consumed across 4 primarily plant-based diets: vegan, vegetarian, pescovegetarian, and semivegetarian. MethodsWe included observational studies reporting on protein intake and/or protein sources in generally healthy adults that were published between 2002 and 2023. We determined the following: 1) % energy from total and plant protein; 2) the proportion of plant protein relative to total protein intake; and 3) main plant protein sources (median percentage contribution of each source to total plant protein intake; interquartile range) consumed across the 4 diets. The plant protein sources were broadly classified into the following United States Department of Agriculture food groups: grains; nuts and seeds; soy products; and beans, peas, and lentils. ResultsWe included 13 studies reporting on protein intake/sources that were conducted in the United States, Europe, and South Korea. Of these, 7 reported on vegan, 11 on vegetarian, 7 on pescovegetarian, and 7 on semivegetarian diets with total protein intake ranging from 10% to 17.4%. Vegan diets had the highest plant protein proportion (range: 77%–98%) and semivegetarian diets the lowest (range: 37%–83%). Plant protein source contribution was the highest from grains (range: 60%–78%). Nuts and seeds were the most consumed in vegetarian diets (7.9%; 2.9%–10.3%) and least in semivegetarian diets (3.7%; 2%–14.8%). Soy products and beans, peas, and lentils were most consumed in vegan diets (17.3%; 16.3%–19.9, and 19.6%; 14.6%–21.3, respectively) and least in semivegetarian (3.7%; 1.3%–13.9%, and 8.5%; 5.2%–10.2%) diets. ConclusionsVegan diets has the highest plant protein proportion and a variety of plant protein sources, while semivegetarian diets has the lowest plant protein proportion and mainly relied on grains as a plant protein source.

Effect of consortia liquid bio-fertilizer on yield, quality and economics of kharif soybean (Glycine max L.)

Effect of consortia liquid bio-fertilizer on yield, quality and economics of kharif soybean (Glycine max L.)

Alleviation of cadmium toxicity in soybean (Glycine max L.): Up-regulating antioxidant capacity and enzyme gene expressions and down-regulating cadmium uptake by organic or inorganic selenium

Although much interest has been focused on the role of selenium (Se) in plant nutrition over the last 20 years, the influences of organic selenium (selenomethionine; Se-Met) and inorganic selenium (potassium selenite; Se-K) on the growth and physiological characters of cadmium (Cd)-stressed Glycine max L.) seedlings have not yet been studied. In this study, the impacts of Se-Met or Se-K on the growth, water physiological parameters (gaseous exchange and leaf water content), photosynthetic and antioxidant capacities, and hormonal balance of G. max seedlings grown under 1.0mM Cd stress were studied. The results showed that 30μM Se-K up-regulates water physiological parameters, photosynthetic indices, antioxidant systems, enzymatic gene expression, total antioxidant activity (TAA), and hormonal balance. In addition, it down-regulates levels of reactive oxygen species (ROS; superoxide free radicals and hydrogen peroxide), oxidative damage (malondialdehyde content as an indicator of lipid peroxidation and electrolyte leakage), Cd translocation factor, and Cd content of Cd-stressed G. max seedlings. These positive findings were in favor of seedling growth and development under Cd stress. However, 50μM Se-Met was more efficient than 30μM Se-K in promoting the above-mentioned parameters of Cd-stressed G. max seedlings. From the current results, we conclude Se-Met could represent a promising strategy to contribute to the development and sustainability of crop production on soils contaminated with Cd at a concentration of up to 1.0mM. However, further work is warranted to better understand the precise mechanisms of Se-Met action under Cd stress conditions.

A global survey of bicarbonate stress-induced pre-mRNA alternative splicing in soybean via integrative analysis of Iso-seq and RNA-seq

Alternative splicing (AS) plays important roles in modulating environmental stress responses in plants. However, little is known about the functions of bicarbonate-induced AS in cultivated soybean (Glycine max L. Merr.). In this study, we combined PacBio isoform sequencing (Iso-seq) and Illumina RNA sequencing (RNA-seq) to elucidate the bicarbonate-induced AS events in soybean root and leaf tissues. Compared to RNA-seq, Iso-seq identified more novel genes and transcripts, as well as more AS events, indicating that Iso-seq is more efficient in AS detection. Combining these two technologies, we found that intron retention (IR) is the most frequent AS event type. We identified a total of 913 and 1974 bicarbonate stress-responsive differentially alternative spliced genes (DAGs) in soybean leaves and roots respectively, from our RNA-seq results. Additionally, we determined a transcription factor (GmNTL9) and a splicing factor (GmRSZ22), and validated their roles in bicarbonate stress response by AS. Overall, our study opens an avenue for evaluating plant AS regulatory networks, and the obtained global landscape of alternative splicing provides valuable insights into the AS-mediated bicarbonate-responsive mechanisms in plant species.