Single-molecule Devices Research Articles

Diffusiophoresis of a pH-regulated polyelectrolyte in a pH-regulated nanochannel

Considering its potential application in improving the performance of a single-molecule biosensing device, the diffusiophoresis of a polyelectrolyte sphere in a charged cylindrical nanochannel is studied taking account of the effect of diffusioosmosis flow. The interaction of the double layers in the present system is expected to influence significantly the relevant fields, yielding profound diffusiophoretic behaviors. Adopting a zwitterionic, pH-regulated polyelectrolyte in a silicon dioxide nanochannel as an example, these behaviors are simulated by varying the pH and the bulk salt concentration of the liquid phase, and the nanochannel radius. We show that the charged nanochannel could influence significantly both the quantitative and the qualitative behavior of the polyelectrolyte. The underlying mechanisms leading to this observation are discussed in detail.

Donor-Acceptor Properties of a Single-Molecule Altered by On-Surface Complex Formation.

Electron donor-acceptor molecules are of outstanding interest in molecular electronics and organic solar cells for their intramolecular charge transfer controlled via electrical or optical excitation. The preservation of their electronic character in the ground state upon adsorption on a surface is cardinal for their implementation in such single-molecule devices. Here, we investigate by atomic force microscopy and scanning tunneling microscopy a prototypical system consisting of a π-conjugated tetrathiafulvalene-fused dipyridophenazine molecule adsorbed on thin NaCl films on Cu(111). Depending on the adsorption site, the molecule is found either in a nearly undisturbed free state or in a bound state. In the latter case, the molecule adopts a specific adsorption site, leading to the formation of a chelate complex with a single Na+ alkali cation pulled out from the insulating film. Although expected to be electronically decoupled, the charge distribution of the complex is drastically modified, leading to the loss of the intrinsic donor-acceptor character. The chelate complex formation is reversible with respect to lateral manipulations, enabling tunable donor-acceptor molecular switches activated by on-surface coordination.

A Single-Molecular AND Gate Operated with Two Orthogonal Switching Mechanisms.

Single-molecular electronics is a potential solution to nanoscale electronic devices. While simple functional single-molecule devices such as diodes, switches, and wires are well studied, complex single-molecular systems with multiple functional units are rarely investigated. Here, a single-molecule AND logic gate is constructed from a proton-switchable edge-on gated pyridinoparacyclophane unit with a light-switchable diarylethene unit. The AND gate can be controlled orthogonally by light and protonation and produce desired electrical output at room temperature. The AND gate shows high conductivity when treated with UV light and in the neutral state, and low conductivity when treated either with visible light or acid. A conductance difference of 7.3 is observed for the switching from the highest conducting state to second-highest conducting state and a conductance ratio of 94 is observed between the most and least conducting states. The orthogonality of the two stimuli is further demonstrated by UV-vis, NMR, and density function theory calculations. This is a demonstration of concept of constructing a complex single-molecule electronic device from two coupled functional units.

Switching Effects in Molecular Electronic Devices

The creation of molecular electronic switches by using smart molecules is of great importance to the field of molecular electronics. This requires a fundamental understanding of the intrinsic electron transport mechanisms, which depend on several factors including the charge transport pathway, the molecule-electrode coupling strength, the energy of the molecular frontier orbitals, and the electron spin state. On the basis of significant progresses achieved in both experiments and theory over the past decade, in this review article we focus on new insights into the design and fabrication of different molecular switches and the corresponding switching effects, which is crucial to the development of molecular electronics. We summarize the strategies developed for single-molecule device fabrication and the mechanism of these switching effects. These analyses should be valuable for deeply understanding the switching effects in molecular electronic devices.

Molecular Diode Studies Based on a Highly Sensitive Molecular Measurement Technique.

In 1974, molecular electronics pioneers Mark Ratner and Arieh Aviram predicted that a single molecule could act as a diode, in which electronic current can be rectified. The electronic rectification property of the diode is one of basic functions of electronic components and since then, the molecular diode has been investigated as a first single-molecule device that would have a practical application. In this review, we first describe the experimental fabrication and electronic characterization techniques of molecular diodes consisting of a small number of molecules or a single molecule. Then, two main mechanisms of the rectification property of the molecular diode are discussed. Finally, representative results for the molecular diode are reviewed and a brief outlook on crucial issues that need to be addressed in future research is discussed.

Spectroscopic and Computational Studies of Spin States of Iron(IV) Nitrido and Imido Complexes

High-oxidation-state metal complexes with multiply bonded ligands are of great interest for both their reactivity as well as their fundamental bonding properties. This paper reports a combined spectroscopic and theoretical investigation into the effect of the apical multiply bonded ligand on the spin-state preferences of threefold symmetric iron(IV) complexes with tris(carbene) donor ligands. Specifically, singlet (S = 0) nitrido [{PhB(ImR)3}FeN], R = tBu (1), Mes (mesityl, 2) and the related triplet (S = 1) imido complexes, [{PhB(ImR)3}Fe(NR')]+, R = Mes, R' = 1-adamantyl (3), tBu (4), were investigated by electronic absorption and Mössbauer effect spectroscopies. For comparison, two other Fe(IV) nitrido complexes, [(TIMENAr)FeN]+ (TIMENAr = tris[2-(3-aryl-imidazol-2-ylidene)ethyl]amine; Ar = Xyl (xylyl), Mes), were investigated by 57Fe Mössbauer spectroscopy, including applied-field measurements. The paramagnetic imido complexes 3 and 4 were also studied by magnetic susceptibility measurements (for 3) and paramagnetic resonance spectroscopy: high-frequency and -field electron paramagnetic resonance (for 3 and 4) and frequency-domain Fourier-transform (FD-FT) terahertz electron paramagnetic resonance (for 3), which reveal their zero-field splitting parameters. Experimentally correlated theoretical studies comprising ligand-field theory and quantum chemical theory, the latter including both density functional theory and ab initio methods, reveal the key role played by the Fe 3dz2 (a1) orbital in these systems: the nature of its interaction with the nitrido or imido ligand dictates the spin-state preference of the complex. The ability to tune the spin state through the energy and nature of a single orbital has general relevance to the factors controlling spin states in complexes with applicability as single molecule devices.

Effects of micro-solvation on the reaction dynamics of biphenyl cations following hole capture

Biphenyl (Bp) and its related compounds are widely applied in single-molecule electronic devices. In this study, the effects of micro-solvation on the hole capture (ionization) dynamics of Bp were investigated by means of direct ab initio molecular dynamics (AIMD) simulations. The micro-solvation of Bp was simulated using one and two water molecules (i.e., Bp(H2O)n (n=0–2)). The reaction dynamics of Bp+(H2O)n following hole capture were investigated via direct AIMD simulation. In the case without H2O (n=0), the twist angle of Bp+ periodically vibrated without decay. In contrast, when water molecules were near Bp+, the amplitude of the twist angle vibration decayed periodically. The formation of hydrogen bonds between Bp+ and water molecules prevents periodic vibration by generating friction. The electronic states and reaction mechanism were investigated based on the theoretical results.

Effect of Ring Strain on the Charge Transport of a Robust Norbornadiene-Quadricyclane-Based Molecular Photoswitch.

Integrating functional molecules into single-molecule devices is a key step toward the realization of future computing machines based on the smallest possible components. In this context, photoswitching molecules that can make a transition between high and low conductivity in response to light are attractive candidates. Here we present the synthesis and conductance properties of a new type of robust molecular photothermal switch based on the norbornadiene (NB)–quadricyclane (QC) system. The transport through the molecule in the ON state is dominated by a pathway through the π-conjugated system, which is no longer available when the system is switched to the OFF state. Interestingly, in the OFF state we find that the same pathway contributes only 12% to the transport properties. We attribute this observation to the strained tetrahedral geometry of the QC. These results challenge the prevailing assumption that current will simply flow through the shortest through-bond path in a molecule.

Spin thermoelectric effects in organic single-molecule devices

The spin thermoelectric performance of a polyacetylene chain bridging two zigzag graphene nanoribbons (ZGNRs) is investigated based on first principles method. Two different edge spin arrangements in ZGNRs are considered. For ferromagnetic (FM) ordering, transmission eigenstates with different spin indices distributed below and above Fermi level are observed, leading directly to a strong spin thermoelectric effect in a wide temperature range. With the edge spins arranged in the antiferromagnetic (AFM) ordering, an obvious transport gap appears in the system, which greatly enhances the thermoelectric effects. The presence of a small spin splitting also induces a spin thermoelectric effect greater than the charge thermoelectric effect in certain temperature range. In general, the single-molecule junction exhibits the potential to be used for the design of perfect thermospin devices.

Metal-Controlled Magnetoresistance at Room Temperature in Single-Molecule Devices.

The appropriate choice of the transition metal complex and metal surface electronic structure opens the possibility to control the spin of the charge carriers through the resulting hybrid molecule/metal spinterface in a single-molecule electrical contact at room temperature. The single-molecule conductance of a Au/molecule/Ni junction can be switched by flipping the magnetization direction of the ferromagnetic electrode. The requirements of the molecule include not just the presence of unpaired electrons: the electronic configuration of the metal center has to provide occupied or empty orbitals that strongly interact with the junction metal electrodes and that are close in energy to their Fermi levels for one of the electronic spins only. The key ingredient for the metal surface is to provide an efficient spin texture induced by the spin-orbit coupling in the topological surface states that results in an efficient spin-dependent interaction with the orbitals of the molecule. The strong magnetoresistance effect found in this kind of single-molecule wire opens a new approach for the design of room-temperature nanoscale devices based on spin-polarized currents controlled at molecular level.

Imaging Molecular Orbitals of Single Picene Molecules Adsorbed on Cu(111) Surface: a Combined Experimental and Theoretical Study

Picene, which attracts the great interest of researchers, not only can be used to fabricate thin film transistors with high hole mobilities, but also is the parent material of a new type organic superconductor. Here, we investigate the electronic properties of individual picene molecules directly adsorbed on Cu(111) surface by a combination of experimental scanning tunneling microscopy/spectroscopy measurements and theoretical calculations based on the density functional theory. At low coverage, the picene molecules exhibit mono-dispersed adsorption behavior with the benzene ring planes parallel to the surface. The highest occupied state around −1.2 V and the lowest unoccupied state around 1.6 V with an obvious energy gap of the singly adsorbed picene molecule are identified by the dI/dV spectra and maps. In addition, we observe the strong dependence of the dI/dV signal of the unoccupied states on the intramolecular positions. Our first-principles calculations reproduce the above experimental results and interpret them as a specific molecule-substrate interaction and energy/spatial distributions of hybrid states mainly derived from different molecular orbitals of picene with some intermixing between them. This work provides direct information on the local electronic structure of individual picene on a metallic substrate and will facilitate the understanding the dependence of electron transport properties on the coupling between molecules and metal electrodes in single-molecule devices.

Thermal conductance of Teflon and Polyethylene: Insight from an atomistic, single-molecule level

The thermal transport properties of teflon (polytetrafluoroethylene) and its polyethylene counterparts are, while highly desirable and widely used, only superficially understood. Here, we aim therefore to provide rigorous insight from an atomistic point of view in context of single-molecule devices. We show that for vinyl polymers adsorbed on metal-surfaces the thermal transport strongly depends on the properties of the metal-molecule interface and that the reduced thermal conductance observed for teflon derivatives originates in a reduced phonon injection life time. In asymmetric molecules phonon blocking on the intra molecular interface leads to a further reduction of thermal conductance. For hetrojunctions with different electrode materials we find that thermal conductance is suppressed due to a reduced overlap of the available phonon modes in the different electrodes. A detailed atomistic picture is thereby provided by studying the transport through perfluorooctane and octane on a single-molecule level using first principles transport calculations and nonequilibrium molecular dynamic simulations.

Modulation and Control of Charge Transport Through Single-Molecule Junctions.

The ability to modulate and control charge transport though single-molecule junction devices is crucial to achieving the ultimate goal of molecular electronics: constructing real-world-applicable electronic components from single molecules. This review aims to highlight the progress made in single-molecule electronics, emphasizing the development of molecular junction electronics in recent years. Among many techniques that attempt to wire a molecule to metallic electrodes, the single-molecule break junction (SMBJ) technique is one of the most reliable and tunable experimental platforms for achieving metal-molecule-metal configurations. It also provides great freedom to tune charge transport through the junction. Soon after the SMBJ technique was introduced, it was extensively used to measure the conductances of individual molecules; however, different conductances were obtained for the same molecule, and it proved difficult to interpret this wide distribution of experimental data. This phenomenon was later found to be mainly due to a lack of precise experimental control and advanced data analysis methods. In recent years, researchers have directed considerable effort into advancing the SMBJ technique by gaining a deeper physical understanding of charge transport through single molecules and thus enhancing its potential applicability in functional molecular-scale electronic devices, such as molecular diodes and molecular transistors. In parallel with that research, novel data analysis methods and approaches that enable the discovery of hidden yet important features in the data are being developed. This review discusses various aspects of molecular junction electronics, from the initial goal of molecular electronics, the development of experimental techniques for creating single-molecule junctions and determining single-molecule conductance, to the characterization of functional current-voltage features and the investigation of physical properties other than charge transport. In addition, the development of advanced data analysis methods is considered, as they are critical to gaining detailed physical insight into the underlying transport mechanisms.

Heterospin biradicals provide insight into molecular conductance and rectification.

The correlation of electron transfer with molecular conductance (g: electron transport through single molecules) by Nitzan and others has contributed to a fundamental understanding of single-molecule electronic materials. When an unsymmetric, dipolar molecule spans two electrodes, the possibility exists for different conductance values at equal, but opposite electrode biases. In the device configuration, these molecules serve as rectifiers of the current and the efficiency of the device is given by the rectification ratio (RR = gforward/greverse). Experimental determination of the RR is challenging since the orientation of the rectifying molecule with respect to the electrodes and with respect to the electrode bias direction is difficult to establish. Thus, while two different values of g can be measured and a RR calculated, one cannot easily assign each conductance value as being aligned with or opposed to the molecular dipole, and calculations are often required to resolve the uncertainty. Herein, we describe the properties of two isomeric, triplet ground state biradical molecules that serve as constant-bias analogs of single-molecule electronic devices. Through established theoretical relationships between g and electronic coupling, H2, and between H2 and magnetic exchange coupling, J (g ∝ H2 ∝ J), we use the ratio of experimental J-values for our two isomers to calculate a RR for an unsymmetric bridge molecule with known geometry relative to the two radical fragments of the molecule and at a spectroscopically-defined potential bias. Our experimental results are compared with device transport calculations.

Single-molecule devices: materials, structures and characteristics

This review article provides a brief survey of materials, structures and current state-of-the-art techniques used to measure the charge conduction characteristics of single molecules. Single molecules have been found to exhibit several unique functionalities including rectification, negative differential resistance and electrical bistable switching, all of which are necessary building blocks for the development and configuration of molecular devices into circuits. Conjugated organic molecules have received considerable interest for their low fabrication cost, three dimensional stacking and mechanical flexibility. Furthermore, the ability of molecules to self-assemble into well-defined structures is imperative for the fabrication of molecule based circuits. The theoretical formalisms are presented for studying single-molecule Coulomb blockade effects, ballistic transport in a molecular chain and electromagnetic coupling between a surface-plasmon field and a single molecule. Moreover, the experimental current–voltage results are discussed using basic principles of carrier transport mechanisms.

Charge carrier transition in an ambipolar single-molecule junction: Its mechanical-modulation and reversibility

AbstractPrecise control from the bottom-up for realizing tunable functionality is of utmost importance to facilitate the development of molecular electronic devices. Until now, however, manipulating charge carriers over single-molecule scale remains intractable. The origin of the problem is that the nature of charge carriers is often hindered by the complexity of the investigated molecular systems. Here, via ab initio simulations, we show a force-modulated and switched ambipolar single-molecule junction with Au/cyclopropane-1,2-dithiol/Au structure. The cyclopropane ring in the molecule can be opened and closed reversibly and repeatedly by the mechanical force. This structural transition from its closed state to open state enables the ambipolarity in charge carriers—from p-type to n-type. Analysis of electronic structure reveals unambiguously the force-dependent correlation between C–S bond order and the nature of charge carriers. Based on this, we design a binary interconnected junction exhibiting resistance, rectification and negative differential resistance functionalities under mechanical modulation, i.e., loading/unloading or pull/push. This interesting phenomenon provides both illuminating insight and feasible controllability into charge carriers in molecules, and a very general idea and useful approach for single-molecule junctions in practical single-molecule devices.

Tuning the electrical conductance of metalloporphyrin supramolecular wires.

In contrast with conventional single-molecule junctions, in which the current flows parallel to the long axis or plane of a molecule, we investigate the transport properties of M(II)-5,15-diphenylporphyrin (M-DPP) single-molecule junctions (M=Co, Ni, Cu, or Zn divalent metal ions), in which the current flows perpendicular to the plane of the porphyrin. Novel STM-based conductance measurements combined with quantum transport calculations demonstrate that current-perpendicular-to-the-plane (CPP) junctions have three-orders-of-magnitude higher electrical conductances than their current-in-plane (CIP) counterparts, ranging from 2.10−2 G0 for Ni-DPP up to 8.10−2 G0 for Zn-DPP. The metal ion in the center of the DPP skeletons is strongly coordinated with the nitrogens of the pyridyl coated electrodes, with a binding energy that is sensitive to the choice of metal ion. We find that the binding energies of Zn-DPP and Co-DPP are significantly higher than those of Ni-DPP and Cu-DPP. Therefore when combined with its higher conductance, we identify Zn-DPP as the favoured candidate for high-conductance CPP single-molecule devices.

Complex formation dynamics in a single-molecule electronic device.

Single-molecule electronic devices offer unique opportunities to investigate the properties of individual molecules that are not accessible in conventional ensemble experiments. However, these investigations remain challenging because they require (i) highly precise device fabrication to incorporate single molecules and (ii) sufficient time resolution to be able to make fast molecular dynamic measurements. We demonstrate a graphene-molecule single-molecule junction that is capable of probing the thermodynamic and kinetic parameters of a host-guest complex. By covalently integrating a conjugated molecular wire with a pendent crown ether into graphene point contacts, we can transduce the physical [2]pseudorotaxane (de)formation processes between the electron-rich crown ether and a dicationic guest into real-time electrical signals. The conductance of the single-molecule junction reveals two-level fluctuations that are highly dependent on temperature and solvent environments, affording a nondestructive means of quantitatively determining the binding and rate constants, as well as the activation energies, for host-guest complexes. The thermodynamic processes reveal the host-guest binding to be enthalpy-driven and are consistent with conventional 1H nuclear magnetic resonance titration experiments. This electronic device opens up a new route to developing single-molecule dynamics investigations with microsecond resolution for a broad range of chemical and biochemical applications.

Single-wavelength-controlled in situ dynamic super-resolution fluorescence imaging for block copolymer nanostructures via blue-light-switchable FRAP.

Photoswitchable fluorophores are promising in single-molecule optical devices and super-resolution fluorescence imaging, especially in single-molecule photo-activated localization microscopy (PALM) or stochastic optical reconstruction microscopy (STORM). However, the scarcity of current photoswitchable fluorophores stimulates researchers to develop complicated optical systems and processing software, in accordance with the limited photoswitchable fluorescent proteins and organic fluorophores. Previous efforts to develop synthetic photoswitchable fluorophores have exhibited their promising potential in super-resolution fluorescence imaging. Here, we have designed and synthesized a fluorescence molecular switch with reversible green emission, a napthalimide-hexaarylbiimidazole conjugate (NI-N-HABI), which exhibits strong fluorescence in the emissive state, with fast thermal fading of the photochromism and spontaneous fluorescence recovery after photobleaching (FRAP) induced by blue-light. The photoswitchable fluorophore enables the red-edge wavelength of the optical response to red-shift from the initial near-UV region at less than 400 nm, to 500 nm. The relatively fast fading speed of NI-N-HABI and its sensitivity to longer blue-light irradiation (400-500 nm) have allowed simplification of the optical microscopic system from a two-wavelength laser source to a single-wavelength laser. We applied NI-N-HABI in single-wavelength-controlled in situ dynamic super-resolution fluorescence imaging for the self-assembly and solvent annealing of amphiphilic block polymers, with 50 nm of optical resolution. Single-wavelength-controlled dynamic super-resolution fluorescence imaging facilitates nanoscale optical visualization for the dynamic physical and chemical fluctuation processes of stimuli-responsive nanostructures.

ChemInform Abstract: Single‐Molecule Sensors: Challenges and Opportunities for Quantitative Analysis

AbstractReview: [71 refs.