Fungal Root Colonization Research Articles

The Use of Coal Gangue as a Cultivation Bed Conditioner in Forage Maize Inoculated with Arbuscular Mycorrhizal Fungi

ABSTRACTA greenhouse pot experiment was conducted to investigate the effect of application of coal gangue (CG) at different rates (0, 5, 10, 20, and 50%) and inoculation with two arbuscular mycorrhizal (AM) fungi Glomus intraradices and Glomus mosseae, as mediating plant adaptation to soil amended with CG, on the nutrient content of forage maize. The results showed CG amendment at all levels and both AM fungi significantly improved the nutrient content of the plant as compared to control. In general, the highest shoot dry weight and nutrient phosphorus, iron, and zinc (P, Fe, and Zn) were obtained with 10% CG and G. intraradice treatments, which were 49.68, 30.49, 16.72, and 75.71% higher than those of the control plants, respectively. Therefore, 10% dose of CG may be considered as a suitable dose for amendment in the corn cultivation bed in terms of providing nutrient contents for this plant as well as AM fungi root colonization.

Changes in arbuscular mycorrhizal fungal attributes along a chronosequence of black locust (Robinia pseudoacacia) plantations can be attributed to the plantation-induced variation in soil properties

Arbuscular mycorrhizal (AM) fungi form symbioses with the majority of terrestrial plant species, and their community influences many important ecosystem processes, including ecological succession. Understanding the successional changes of AM fungal communities in afforested zones over time is of primary interest in forest ecology. Black locust (Robinia pseudoacacia) has been widely planted on the Loess Plateau of China to prevent soil erosion. We sampled fine roots and rhizosphere soils in black locust plantations consisting of stands of 0, 11, 23, 35 and 46years of age to measure soil properties, AM fungal colonization level, and spore density and to describe the composition of AM fungal communities in roots and soils using 454 sequencing. With increasing stand age, AM fungal spore density and soil NO3-N and available K contents increased, dehydrogenase and alkaline phosphatase activities decreased, and soil catalase activity and the level of root colonization by arbuscules and hyphae first increased and then decreased. Roots and soils hosted different AM fungal diversity and communities. In soils, AM fungal diversity and community composition did not vary with stand age. In roots, the relative abundance of Claroideoglomus, together with Chao1 richness and OTU richness, peaked at the intermediate stage (35years) and then declined, and the relative abundance of Glomus decreased linearly with tree age, whereas the relative abundance of the dominant genus Rhizophagus did not vary with stand age. Soil available K and NO3-N largely explained the shift in the structure of the root-colonizing AM fungal community along the chronosequence. Soil enzyme activities were also associated with changes in AM fungal spore abundance and root colonization level. All the results presented here suggest that the successional changes in AM fungal communities in black locust plantations occurring over time can largely be attributed to plantation-induced changes in soil nutrient levels.

Spatial variation in edaphic characteristics is a stronger control than nitrogen inputs in regulating soil microbial effects on a desert grass

Increased atmospheric nitrogen (N) deposition can have wide-ranging effects on plant community structure and ecosystem function, some of which may be indirectly mediated by soil microbial responses to an altered biogeochemical environment. In this study, soils from a field N fertilization experiment that spanned a soil texture gradient were used as inocula in the greenhouse to assess the indirect effects of soil microbial communities on growth of a desert grass. Plant performance and interaction with soil microbiota were evaluated via plant above- and belowground biomass, leaf N concentration, and root fungal colonization. Nitrogen fertilization in the field increased the benefits of soil microbial inoculation to plant leaf N concentration, but did not alter the effect of soil microbes on plant growth. Plant-microbe interaction outcomes differed most strongly among sites with different soil textures, where the soil microbial community from the sandiest site was most beneficial to host plant growth. The findings of this study suggest that in a desert grassland, increases in atmospheric N deposition may exert a more subtle influence on plant-microbe interactions by altering plant nutrient status, whereas edaphic factors can alter the whole-plant growth response to soil microbial associates.

Gene expression analyses in tomato near isogenic lines provide evidence for ethylene and abscisic acid biosynthesis fine-tuning during arbuscular mycorrhiza development.

Plant responses to the environment and microorganisms, including arbuscular mycorrhizal fungi, involve complex hormonal interactions. It is known that abscisic acid (ABA) and ethylene may be involved in the regulation of arbuscular mycorrhiza (AM) and that part of the detrimental effects of ABA deficiency in plants is due to ethylene overproduction. In this study, we aimed to determine whether the low susceptibility to mycorrhizal colonization in ABA-deficient mutants is due to high levels of ethylene and whether AM development is associated with changes in the steady-state levels of transcripts of genes involved in the biosynthesis of ethylene and ABA. For that, tomato (Solanum lycopersicum) ethylene overproducer epinastic (epi) mutant and the ABA-deficient notabilis (not) and sitiens (sit) mutants, in the same Micro-Tom (MT) genetic background, were inoculated with Rhizophagus clarus, and treated with the ethylene biosynthesis inhibitor aminoethoxyvinylglycine (AVG). The development of AM, as well as the steady-state levels of transcripts involved in ethylene (LeACS2, LeACO1 and LeACO4) and ABA (LeNCED) biosynthesis, was determined. The intraradical colonization in epi, not and sit mutants was significantly reduced compared to MT. The epi mutant completely restored the mycorrhizal colonization to the levels of MT with the application of 10µM of AVG, probably due to the inhibition of the ACC synthase gene expression. The steady-state levels of LeACS2 and LeACO4 transcripts were induced in mycorrhizal roots of MT, whereas the steady-state levels of LeACO1 and LeACO4 transcripts were significantly induced in sit, and the steady-state levels of LeNCED transcripts were significantly induced in all genotypes and in mycorrhizal roots of epi mutants treated with AVG. The reduced mycorrhizal colonization in sit mutants seems not to be limited by ethylene production via ACC oxidase regulation. Both ethylene overproduction and ABA deficiency impaired AM fungal colonization in tomato roots, indicating that, besides hormonal interactions, a fine-tuning of each hormone level is required for AM development.

Specificity of root microbiomes in native-grown Nicotiana attenuata and plant responses to UVB increase Deinococcus colonization.

Plants recruit microbial communities from the soil in which they germinate. Our understanding of the recruitment process and the factors affecting it is still limited for most microbial taxa. We analysed several factors potentially affecting root microbiome structure - the importance of geographic location of natural populations, the microbiome of native seeds as putative source of colonization and the effect of a plant's response to UVB exposure on root colonization of highly abundant species. The microbiome of Nicotiana attenuata seeds was determined by a culture-dependent and culture-independent approach, and the root microbiome of natural N.attenuata populations from five different locations was analysed using 454-pyrosequencing. To specifically address the influence of UVB light on root colonization by Deinococcus, a genus abundant and consistently present in N.attenuata roots, transgenic lines impaired in UVB perception (irUVR8) and response (irCHAL) were investigated in a microcosm experiment with/without UVB supplementation using a synthetic bacterial community. The seed microbiome analysis indicated that N.attenuata seeds are sterile. Alpha and beta diversities of native root bacterial communities differed significantly between soil and root, while location had only a significant effect on the fungal but not the bacterial root communities. With UVB supplementation, root colonization of Deinococcus increased in wild type, but decreased in irUVR8 and irCHAL plants compared to nontreated plants. Our results suggest that N.attenuata recruits a core root microbiome exclusively from soil, with fungal root colonization being less selective than bacterial colonization. Root colonization by Deinococcus depends on the plant's response to UVB.

Native soil organic matter as a decisive factor to determine the arbuscular mycorrhizal fungal community structure in contaminated soils

The present study of arbuscular mycorrhizal (AM) fungi is focused on the identification of AM ecotypes associated with different plants species (Poa annua, Medicago polymorpha, and Malva sylvestris) growing in three contaminated soils with different organic matter, phosphorus, and trace element (TE; Cu, Cd, Mn, and Zn) contents. Soils were amended with biosolid and alperujo compost. Shifts in AM fungal community structure, diversity, richness, root colonization, and plant TE uptake were evaluated. Soil properties and plant species had a significant effect on AM fungal community composition as well as on root colonization. However, AM fungal diversity and richness were only affected by soil properties and especially by soil organic matter that was a major driver of AM fungal community. As soil quality increased, Glomeraceae decreased in favor of Claroideoglomeraceae in the community, AM fungal diversity and richness increased, and root colonization decreased. No effect due to amendment (exogenous organic matter) addition was found either in AM fungal parameters measured or TE plant uptake. Our results revealed that the role of TE contamination was secondary for the fungal community behavior, being the native organic matter content the most significant factor.

Interactions between microbial plant growth promoters and their effects on maize growth performance in different mineral and organic fertilization scenarios

We examined interactions between microbial plant growth promoters and their single and combined effects on maize plant growth with and without mineral NPK fertilization and with and without organic fertilization in terms of maize stover. Two similar greenhouse pot experiments were performed one with disinfected soil and another with non-disinfected soil as growth substrate. Three commercial microbial biofertilizers were examined including the arbuscular mycorrhizal (AM) fungus Rhizophagus irregularis, the saprotrophic fungus Trichoderma harzianum and the rhizobacterium Azospirillum brasilense. In general microbial inoculations had limited effects on maize growth compared to mineral and organic fertilization. Among the microbial plant growth promoters examined only T. harzianum caused plant growth promotion, and only in combination with mineral fertilization and with disinfected soil as growth substrate. Despite of the limited effects of microbial inoculations on plant growth strong microbial interactions were observed. Population density of diazotrophic bacteria in soil was markedly higher with mineral fertilizers. Combination of A. brasilense with one or both of the two other microbial biofertilizers reduced the population density of diazoptrophic bacteria in disinfected soil. Both mineral and organic fertilization reduced AM fungus root colonization in non-disinfected soil, which on the other hand was counteracted from inoculation with microbial biofertilizers. In conclusion, despite limited effects on plant growth performance inoculation with commercial microbial biofertilizers can have strong effects on native populations of AM fungi and diazotrophic bacteria, which should be considered when integrating microbial biofertilizers in agroecosystems.

Spatiotemporal variation of arbuscular mycorrhizal fungal colonization in olive (Olea europaea L.) roots across a broad mesic-xeric climatic gradient in North Africa.

This study aims to determine the spatiotemporal dynamics of root colonization and spore density of arbuscular mycorrhizal fungi (AMF) in the rhizosphere of olive trees (Olea europaea) with different plantation ages and under different climatic areas in Algeria. Soil and root samples were seasonally collected from three olive plantations of different ages. Other samples were carried out in productive olive orchards cultivated under a climatic gradient (desertic, semi-arid, subhumid, and humid). The olive varieties analysed in this study were Blanquette, Rougette, Chemlel and the wild-olive. Spore density, mycorrhization intensity (M%), spore diversity and the most probable number (MPN) were determined. Both the intensity of mycorrhizal colonization and spore density increased with the increase of seasonal precipitation and decreased with the increase of air temperature regardless of the climatic region or olive variety. The variety Rougette had the highest mycorrhizal levels in all plantation ages and climates. Spore community was composed of the genera Rhizophagus, Funneliformis, Glomus, Septoglomus, Gigaspora, Scutellospora and Entrophospora. The genus Glomus, with four species, predominated in all climate regions. Spores of Gigaspora sp. and Scutellospora sp. were the most abundant in desertic plantations. Statistical models indicated a positive relationship between spore density and M% during spring and winter in young seedlings and old plantations. A significant positive relationship was found between MPN and spore density under different climates. For a mycotrophic species, the rhizosphere of olive trees proved to be poor in mycorrhiza in terms of mycorrhizal colonization and numbers of the infective AMF propagules.

The Effect of Distance from River on Soil Physiochemical Properties, Root Colonization and Spore density of Arbuscular Mycorrhizal Fungi Associated with Salt Cedar

The Effect of Distance from River on Soil Physiochemical Properties, Root Colonization and Spore density of Arbuscular Mycorrhizal Fungi Associated with Salt Cedar

Colonization and community structure of arbuscular mycorrhizal fungi in maize roots at different depths in the soil profile respond differently to phosphorus inputs on a long-term experimental site

Effects of soil depth and plant growth stages on arbuscular mycorrhizal fungal (AMF) colonization and community structure in maize roots and their potential contribution to host plant phosphorus (P) nutrition under different P-fertilizer inputs were studied. Research was conducted on a long-term field experiment over 3years. AMF colonization was assessed by AM colonization rate and arbuscule abundances and their potential contribution to host P nutrition by intensity of fungal alkaline phosphatase (ALP)/acid phosphatase (ACP) activities and expressions of ZmPht1;6 and ZmCCD8a in roots from the topsoil and subsoil layer at different growth stages. AMF community structure was determined by specific amplification of 18S rDNA. Increasing P inputs up to 75-100kgha-1yr-1 increased shoot biomass and P content but decreased AMF colonization and interactions between AMF and roots. AM colonization rate, intensity of fungal ACP/ALP activities, and expression of ZmPht1;6 in roots from the subsoil were greater than those from topsoil at elongation and silking but not at the dough stage when plants received adequate or excessive P inputs. Neither P input nor soil depth influenced the number of AMF operational taxonomic units (OTUs) present in roots, but P-fertilizer input, in particular, influenced community composition and relative AMF abundance. In conclusion, although increasing P inputs reduce AMF colonization and influence AMF community structure, AMF can potentially contribute to plant P nutrition even in well-fertilized soils, depending on the soil layer in which roots are located and the growth stage of host plants.

Experimental climate warming alters the relationship between fungal root symbiosis and Sphagnum litter phenolics in two peatland microhabitats

Belowground interactions between plants and microorganisms are involved in numerous ecosystems processes such as carbon and nutrient cycling. Understanding their responses to on-going climate warming is thus of paramount importance to better predict future ecosystem functioning. We hypothesized that climate warming alters the interactions between Sphagnum litter phenolics and the fungal root symbiosis of the Ericale plant Andromeda polifolia in a Jura mountain peatland (France). We initiate a climate warming treatment (+1 °C) in April 2008 in two microhabitats (lawns and hummocks). We measured polyphenolic contents, mycorrhizal and dark septate endophyte (DSE) root colonization, phenoloxidase and peroxidase activities in the A. polifolia rhizosphere from 2010 to 2012. We found that four years of warming modulated rhizospheric parameters (fungal root symbiosis and enzyme activities) of A. polifolia, but the response differed between microhabitats. Enzyme activities and fungal root colonization displayed different responses to warming according to the microhabitats. DSE root colonization increased and peroxidase activities decreased in warmed Hummocks while they remained stable in warmed lawns. We found a significant positive correlation between DSE root colonization and litter phenolics recovered in both microhabitats but only under in ambient conditions. On the contrary, significant negative correlation was observed between mycorrhizae and litter phenolics recovered in warmed plots while no relationship was found in control plots. Our work thus provides evidences that interplay between phenolics from Sphagnum litter and fungal symbiosis of an Ericale species in peatlands was affected by climate warming. It highlights different plant biological responses to climate warming according to peatland microhabitats and confirm that belowground activities are crucial to understand the response of peatlands to climate change.

The impact of legume and cereal cover crops on rhizosphere microbial communities of subsequent vegetable crops for contrasting crop decline

Crop decline is a progressive soil health reduction commonly associated to the specialized cultivations. As a series of biotic factors are involved in this phenomenon, it can be controlled with essentially agronomic methods, the impact of winter cover crops on early growth at subsequent vegetable crops was investigated in a two-year field study. Barley and hairy vetch were incorporated into the soil following two mechanical terminations of cover crops (green manure and green mulching). Immediately after, tomato and zucchini seedlings were transplanted and grown for 28days. The above-ground biomass of the vegetables was taken as indicator of crop response to pre-plant treatments, whilst root colonizing fungi and rhizosphere bacteria were the two analyzed soil microbial components. Root-colonizing fungi were evaluated using culture-based methods, bacteria were analyzed by amplification of rhizosphere soil DNA with 16S rDNA, then processed with PCR-DGGE. Tomato and zucchini growth response after vetch was always significantly higher than after barley regardless of mechanical termination. Rhizosphere bacterial communities differed significantly between cover crops and this differences was maintained also in the subsequent vegetable crops. Root-colonizing fungi differed between barley and vetch, although they shared most species (70%) such as Pythium spp., binucleate Rhizoctonia AG-A and several Fusarium spp. The latter three fungal groups were also found most abundant in tomato and zucchini roots. Pathogenicity test showed that tomato was more susceptible than zucchini to Pythium, Rhizoctonia solani, Fusarium oxysporum and Fusarium spp. and that their relationship with vegetable plants varied from pathogenic to neutral, up to mutualistic in the case of Rhizoctonia AG-A. These findings indicate difficulty to identify specific biotic agents responsible of crop decline. Tomato and zucchini showed an undoubted growth improvement after legume; however, a certain specificity of Cylindrocarpon-like fungi and Phoma spp. to hairy vetch suggests that, when exploiting benefit of this cover crop for mitigating yield decline of vegetable crops, legume should alternate cereal and other botanically distant genera in rotation.

Recovery of arbuscular mycorrhizal fungi root colonization after severe anthropogenic disturbance: four species assessed in old-growth Mediterranean grassland

Arbuscular mycorrhizal fungi (AMF) interact continuously with vegetation and soil, and thus shape the dynamics of plant communities. Yet the recovery of AMF after severe anthropogenic disturbance such as cultivation has rarely been assessed. Here, to determine whether AMF root colonization recovers after such disturbance, we compared AMF root colonization in abandoned fields last cultivated 2, 35 and 150 years ago in the La Crau area (south-eastern France) with that of a grassland several thousands of years old (considered as the reference ecosystem). We measured AMF root colonization of four species (Carthamus lanatus, Carduus pycnocephalus, Brachypodium distachyon and Bromus madritensis) and performed surveys of plant communities and soil chemical properties. AMF root colonization was still significantly lower 35 years after disturbance for one species (B. distachyon) and two years after disturbance for one species (B. madritensis). The main soil chemical properties (soil pH, phosphorus and potassium content) were similar to the reference ecosystem 35 years after disturbance. Average vegetation height and cover recovered after 35 years whereas species richness recovered only on the field abandoned for 150 years. Vegetation composition and structure did not recover in any of the abandoned fields. Our results suggest that recovery of AMF root colonization is very low after a severe anthropogenic disturbance, despite the recovery of soil chemical properties.

Low diversity and abundance of root endophytes prevail throughout the life cycle of an annual halophyte

Plants growing in highly saline soils harbor unique communities of fungal root endophytes. We aimed to gain insight into how these communities are established in natural plant populations. We used cultivation-based and molecular approaches to examine root-endophytic colonization in the annual halophyte Salicornia patula at three time points over a 5-month period, from establishment to flowering. At the last sampling, the endophytic community of S. patula was compared to that in the related but perennial halophyte Arthrocnemum macrostachyum. The presence of root endophytes in S. patula was negligible at the first two sampling times, and remained low at the last sampling compared to A. macrostachyum. The latter species showed a well-established endophytic community in its roots that differed from that in S. patula, which was dominated by members of Pleosporales. Although such differences could be partially due to the host lifestyle, the possibility of a strong effect of the substratum could not be excluded. Altogether, our data indicate that the fungal endophytic colonization of roots is a slow process under salt stress. Therefore, we suggest that, in contrast to what is proposed for other systems, endophyte symbioses are unlikely to impact the development of the short-life-cycled S. patula living in these environments.

Endophytic Fusarium equiseti stimulates plant growth and reduces root rot disease of pea (Pisum sativum L.) caused by Fusarium avenaceum and Peyronellaea pinodella

Endophytic root-colonizing fungi are an intriguing group of microorganisms that have the ability to form mutualistic associations with plants. Many endophytes confer benefits to their hosts such as plant growth promotion and disease suppression. Their potential to promote agro-ecosystem efficiency through beneficial impacts on their hosts is of great interest for agriculture and may contribute to reduced needs for agrochemicals. We investigated the ability of three Fusarium equiseti (Fe) isolates to endophytically colonize pea roots and the influence of endophytic development on plant growth, pathogen proliferation and root rot disease caused by F. avenaceum (Fa) and Peyronellaea pinodella (Pp). Fe was inoculated following sowing, while Fa and Pp were either inoculated simultaneously with Fe or 5 days after Fe. When only Fe was inoculated, two of the isolates significantly promoted plant growth at the end of the 4 week experiment. Simultaneous inoculation of Fe with Fa or pre-inoculation of pea plants for 5 days with any one of the three F. equiseti isolates resulted in disease suppression and significant reduction of Fa population, particularly in the root cortex. However, Fe isolates significantly reduced disease and root cortex colonization rates of Pp only in the plants inoculated with Fe 5 days before the pathogen. This study shows that F. equiseti can promote pea growth and has the ability to alter the interaction pea - Fa/Pp, consequently leading to reduced root rot disease severity.

A Chinese cabbage (Brassica campetris subsp. Chinensis) τ-type glutathione-S-transferase stimulates Arabidopsis development and primes against abiotic and biotic stress.

The beneficial root-colonizing fungus Piriformospora indica stimulates root development of Chinese cabbage (Brassica campestris subsp. Chinensis) and this is accompanied by the up-regulation of a τ-class glutathione (GSH)-S-transferase gene (BcGSTU) (Lee et al. 2011) in the roots. BcGSTU expression is further promoted by osmotic (salt and PEG) and heat stress. Ectopic expression of BcGSTU in Arabidopsis under the control of the 35S promoter results in the promotion of root and shoot growth as well as better performance of the plants under abiotic (150mM NaCl, PEG, 42 °C) and biotic (Alternaria brassicae infection) stresses. Higher levels of glutathione, auxin and stress-related (salicylic and jasmonic acid) phytohormones as well as changes in the gene expression profile result in better performance of the BcGSTU expressors upon exposure to stress. Simultaneously the plants are primed against upcoming stresses. We propose that BcGSTU is a target of P. indica in Chinese cabbage roots because the enzyme participates in balancing growth and stress responses, depending on the equilibrium of the symbiotic interaction. A comparable function of BcGST in transgenic Arabidopsis makes the enzyme a valuable tool for agricultural applications.

A shift from arbuscular mycorrhizal to dark septate endophytic colonization in Deschampsia flexuosa roots occurs along primary successional gradient.

Soil fungal community and dominant mycorrhizal types are known to shift along with plant community changes during primary succession. However, it is not well understood how and why root fungal symbionts and colonization types vary within the plant host when the host species is able to thrive both at young and at old successional stages with different light and nutrient resource availability. We asked (i) how root fungal colonization of Deschampsia flexuosa (Poaceae) by arbuscular mycorrhizal (AM) fungi and dark septate endophytes (DSE) changes along a postglacial primary successional land uplift gradient. As neighboring vegetation may play a role in root fungal colonization, we also asked (ii) whether removal of the dominant neighbor, Empetrum nigrum ssp. hermaphroditum (Ericaceae), affects root fungal colonization of Deschampsia. We also studied whether (iii) foliar carbon (C) and nitrogen (N) concentration of Deschampsia is related to successional changes along a land uplift gradient. AM colonization decreased (-50%), DSE colonization increased (+200%), and foliar C declined in Deschampsia along with increasing successional age, whereas foliar N was not affected. Empetrum removal did not affect AM colonization but increased DSE sclerotial colonization especially at older successional stages. The observed decrease in foliar C coincides with an increase in canopy closure along with increasing successional age. We suggest that the shift from an AM-dominated to a DSE-dominated root fungal community in Deschampsia along a land uplift successional gradient may be related to different nutritional benefits gained through these root fungal groups.

Associative interplay of plant growth promoting rhizobacteria (Pseudomonas aeruginosa QS40) with nitrogen fertilizers improves sunflower (Helianthus annuus L.) productivity and fertility of aridisol

The environmental and economic impacts of chemical fertilizer have encouraged farmers to integrate them with organic materials, an important nutrient management strategy for sustainable agriculture production. In the present study, we conducted field experiments to study the effects of nitrogen enriched compost (NEC) and mineral nitrogen (MN) fertilizer with a selected plant growth promoting rhizobacterial (PGPR) strain, Pseudomonas aeruginosa QS40, on productivity of sunflower and soil fertility. The results demonstrated that integrated application of PGPR with organic-inorganic N significantly increased shoot and root length, leaf area, total chlorophyll, head diameter, fresh biomass, straw-achene yield and N uptake in sunflower compared to unamended control and PGPR alone. The results also showed that integrated N biofertilizer regime enhanced soil microbial biomass, enzymatic activities and soil nitrogen contents. We also observed significant changes in rhizosphere soil pH, abundance of cultivable bacteria and arbuscular mycorrhizae fungi (AMF) root colonization. Treatment and year interaction was significant for dissolved organic carbon (DOC) and microbial biomass carbon (MBC) only. These results suggest that the efficiency of PGPR could be improved with increased availability of labile C substrate resource in NEC amended aridisol. We conclude that the application of NEC fertilizer with efficient PGPR biofertilizer may improve sunflower productivity and soil chemical and biological fertility in nutrient-poor agroecosystems of arid and semi-arid regions.

Piriformospora indica Stimulates Root Metabolism of Arabidopsis thaliana.

Piriformospora indica is a root-colonizing fungus, which interacts with a variety of plants including Arabidopsis thaliana. This interaction has been considered as mutualistic leading to growth promotion of the host. So far, only indolic glucosinolates and phytohormones have been identified as key players. In a comprehensive non-targeted metabolite profiling study, we analyzed Arabidopsis thaliana’s roots, root exudates, and leaves of inoculated and non-inoculated plants by ultra performance liquid chromatography/electrospray ionization quadrupole-time-of-flight mass spectrometry (UPLC/(ESI)-QTOFMS) and gas chromatography/electron ionization quadrupole mass spectrometry (GC/EI-QMS), and identified further biomarkers. Among them, the concentration of nucleosides, dipeptides, oligolignols, and glucosinolate degradation products was affected in the exudates. In the root profiles, nearly all metabolite levels increased upon co-cultivation, like carbohydrates, organic acids, amino acids, glucosinolates, oligolignols, and flavonoids. In the leaf profiles, we detected by far less significant changes. We only observed an increased concentration of organic acids, carbohydrates, ascorbate, glucosinolates and hydroxycinnamic acids, and a decreased concentration of nitrogen-rich amino acids in inoculated plants. These findings contribute to the understanding of symbiotic interactions between plant roots and fungi of the order of Sebacinales and are a valid source for follow-up mechanistic studies, because these symbioses are particular and clearly different from interactions of roots with mycorrhizal fungi or dark septate endophytes

Species richness and root colonization of arbuscular mycorrhizal fungi in Syngonanthus elegans, an endemic and threatened species from the Cerrado domain in Brazil

ABSTRACT Syngonanthus elegans is an endangered plant species occurring in the Brazilian Cerrado whose interaction with arbuscular mycorrhizal fungi (AMF) is poorly understood. The aim of this work was to evaluate the occurrence of AMF species and mycorrhizal colonization of S. elegans in two sampling areas named "Soberbo" stream (Soberbo) and "Parque Nacional das Sempre-Vivas" (Park), both found in Diamantina-MG, Brazil. In each area, one plot (100 x 100 m) was established, and roots and soil samples near the roots were collected from 10 plants in each plot. Further sampling included three specimens each of Loudetiopsis chrysothrix and Xyris sp.. Typical mycorrhizal colonization structures were observed in S. elegans roots, and colonization was measured at 75%. Considering both sites and all three hosts, 26 AMF species were recovered, 8 of which were identified only at the genus level. Glomus sp. 1, Scutellospora pernambucana, Acaulospora cavernata and Acaulospora mellea were classified as dominant in both areas. Other species were also considered dominant, including Glomus sp. 4 in Soberbo and Dentiscutata biornata and Gigaspora albida in Park. Trap cultures revealed the presence of seven additional species. For S. elegans, AMF species richness was slightly higher in Park than in Soberbo. Simpson diversity and evenness were slightly higher in Soberbo for S. elegans-associated AMF communities. Overall, S. elegans is highly colonized by arbuscular mycorrhizal fungi and is associated with a wide range of AMF species in the field, suggesting that this association is important for the establishment and survival of this threatened species. Some of the observed species may be new to science.