Abstract This work solves the three-dimensional inverse boundary value problem with the quadratic Wasserstein distance (W 2), which originates from the optimal transportation (OT) theory. The computation of the W 2 distance on the manifold surface is boiled down to solving the generalized Monge–Ampère equation, whose solution is directly related to the gradient of the W 2 distance. An efficient first-order method based on iteratively solving Poisson’s equation is introduced to solve the fully nonlinear elliptic equation. Combining with the adjoint-state technique, the optimization framework based on the W 2 distance is developed to solve the three-dimensional electrical impedance tomography problem. The proposed method is especially suitable for severely ill-posed and highly nonlinear inverse problems. Numerical experiments demonstrate that our method improves the stability and outperforms the traditional regularization methods.
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