Population-specific Responses Research Articles

Collective effects of rising average temperatures and heat events on oviparous embryos.

Survival of the immobile embryo in response to rising temperature is important to determine a species' vulnerability to climate change. However, the collective effects of 2 key thermal characteristics associated with climate change (i.e., rising average temperature and acute heat events) on embryonic survival remain largely unexplored. We used empirical measurements and niche modeling to investigate how chronic and acute heat stress independently and collectively influence the embryonic survival of lizards across latitudes. We collected and bred lizards from 5 latitudes and incubated their eggs across a range of temperatures to quantify population-specific responses to chronic and acute heat stress. Using an embryonic development model parameterized with measured embryonic heat tolerances, we further identified a collective impact of embryonic chronic and acute heat tolerances on embryonic survival. We also incorporated embryonic chronic and acute heat tolerance in hybrid species distribution models to determine species' range shifts under climate change. Embryos' tolerance of chronic heat (T-chronic) remained consistent across latitudes, whereas their tolerance of acute heat (T-acute) was higher at high latitudes than at low latitudes. Tolerance of acute heat exerted a more pronounced influence than tolerance of chronic heat. In species distribution models, climate change led to the most significant habitat loss for each population and species in its low-latitude distribution. Consequently, habitat for populations across all latitudes will shift toward high latitudes. Our study also highlights the importance of considering embryonic survival under chronic and acute heat stresses to predict species' vulnerability to climate change.

Population-specific responses to developmental temperature in the arboviral vector Aedes albopictus: Implications for climate change.

The increase of environmental temperature due to current global warming is not only favouring the expansion of the distribution range of many insect species, but it is also changing their phenology. Insect phenology is tightly linked to developmental timing, which is regulated by environmental temperatures. However, the degree to which the effects of developmental temperatures extend across developmental stages and their inter-stage relationships have not been thoroughly quantified in mosquitoes. Here, we used the mosquito Aedes albopictus, which is an aggressive invasive species and an arboviral vector, to study how developmental temperature influences fitness across developmental stages, thermal traits, energy reserves, transcriptome and Wolbachia prevalence in laboratory-reared populations originally collected from either temperate or tropical regions. We show that hatchability, larval and pupal viability and developmental speed are strongly influenced by temperature, and these effects extend to wing length, body mass, longevity and content of water, protein and lipids in adults in a population-specific manner. On the contrary, neither adult thermal preference nor heat resistance significantly change with temperature. Wolbachia density was generally lower in adult mosquitoes reared at 18°C than at other tested temperatures, and transcriptome analysis showed enrichment for functions linked to stress responses (i.e. cuticle proteins and chitin, cytochrome p450 and heat shock proteins) in mosquitoes reared at both 18 and 32°C. Our data showed an overall reduced vector fitness performance when mosquitoes were reared at 32°C, and the absence of isomorphy in the relationship between developmental stages and temperature in the laboratory population deriving from larvae collected in northern Italy. Altogether, these results have important implications for reliable model projections of the invasion potentials of Ae. albopictus and its epidemiological impact.

Does pre-exposure to polluted sediment affect sub-cellular to population-level responses to contaminant exposure in a sentinel species?

Understanding how key-species respond to anthropogenic stress such as chemical pollution is critical for predicting ecosystem changes. Little is however known about the intra-specific variability in the physiological and biochemical traits involved in contaminant exposure responses. Here, we explored this idea by exposing the Baltic amphipod Monoporeia affinis from two sites, one moderately polluted and one more pristine, to a sediment spiked with PAHs and PCBs. We evaluated the amphipods responses related to feeding, growth, a stress biomarker (acetylcholinesterase [AChE] inhibition) and stable isotope (δ13C and δ15N) composition including isotope niche analyses. More adverse responses were expected in animals from the low-pollution site than those from the high-pollution site due to tolerance development in the latter. Amphipods from both populations showed a ∼30% AChE inhibition when exposed to the contaminant spiked sediment. However, both controls and exposed amphipods from the high-pollution site had higher survival, nutrient uptake and condition status than the amphipods from the low-pollution site, which did not feed on the added diatoms as indicated by their isotope values. We found no signs of population-specific responses in physiological adjustments to contaminants with regard to classic ecotoxicological biomarkers such as AChE inhibition and growth status. Instead, isotope niche analyses proved useful in assessing contaminant stress responses at the population level.

Thermal tolerance and vulnerability to warming differ between populations of wild Oncorhynchus mykiss near the species’ southern range limit

Fish habitat temperatures are increasing due to human impacts including climate change. For broadly distributed species, thermal tolerance can vary at the population level, making it challenging to predict which populations are most vulnerable to warming. Populations inhabiting warm range boundaries may be more resilient to these changes due to adaptation or acclimatization to warmer temperatures, or they may be more vulnerable as temperatures may already approach their physiological limits. We tested functional and critical thermal tolerance of two populations of wild Oncorhynchus mykiss near the species’ southern range limit and, as predicted, found population-specific responses to temperature. Specifically, the population inhabiting the warmer stream, Piru Creek, had higher critical thermal maxima and higher functional thermal tolerance compared to the population from the cooler stream, Arroyo Seco. Arroyo Seco O. mykiss are more likely to experience a limitation of aerobic scope with warming. Piru Creek O. mykiss, however, had higher resting metabolic rates and prolonged exercise recovery, meaning that they could be more vulnerable to warming if prey or dissolved oxygen become limited. Temperature varies widely between streams near the O. mykiss southern range limit and populations will likely have unique responses to warming based on their thermal tolerances and metabolic requirements.

Population-specific responses in eastern oysters exposed to low salinity in the northern Gulf of Mexico.

Eastern oysters, Crassostrea virginica, are facing rapid environmental changes in the northern Gulf of Mexico and can respond to these changes via plasticity or evolution. Plastic responses can immediately buffer against environmental changes, although this buffering may impact the organism's ability to evolve in subsequent generations. While plasticity and evolution are not mutually exclusive, the relative contribution and interaction between them remains unclear. In this study, we investigated the roles of plastic and evolved responses of C. virginica acclimated to low salinity using a common garden experiment with four populations exposed to two salinities. We used three transcriptomic analyses (edgeR, PERMANOVA and WGCNA) combined with physiology data to identify the effect of genotype (population), environment (salinity) and the genotype-environment interaction on both whole-organism and molecular phenotypes. We demonstrate that variation in gene expression is mainly driven by population, with relatively small changes in response to salinity. In contrast, the morphology and physiology data reveal that salinity has a larger influence on oyster performance than the population of origin. All analyses lacked signatures of the genotype×environment interaction and, in contrast to previous studies, we found no evidence for population-specific responses to low salinity. However, individuals from the highest salinity estuary displayed highly divergent gene expression from that of other populations, which could potentially drive population-specific responses to other stressors. Our findings suggest that C. virginica largely rely on plasticity in physiology to buffer the effects of low salinity, but that these changes in physiology do not rely on large persistent changes in gene expression.

Putative adaptive loci show parallel clinal variation in a California-endemic wildflower.

As the global climate crisis continues, predictions concerning how wild populations will respond to changing climate conditions are informed by an understanding of how populations have responded and/or adapted to climate variables in the past. Changes in the local biotic and abiotic environment can drive differences in phenology, physiology, morphology and demography between populations leading to local adaptation, yet the molecular basis of adaptive evolution in wild non-model organisms is poorly understood. We leverage comparisons between two lineages of Calochortus venustus occurring along parallel transects that allow us to identify loci under selection and measure clinal variation in allele frequencies as evidence of population-specific responses to selection along climatic gradients. We identify targets of selection by distinguishing loci that are outliers to population structure and by using genotype-environment associations across transects to detect loci under selection from each of nine climatic variables. Despite gene flow between individuals of different floral phenotypes and between populations, we find evidence of ecological specialization at the molecular level, including genes associated with key plant functions linked to plant adaptation to California's Mediterranean climate. Single-nucleotide polymorphisms (SNPs) present in both transects show similar trends in allelic similarity across latitudes indicating parallel adaptation to northern climates. Comparisons between eastern and western populations across latitudes indicate divergent genetic evolution between transects, suggesting local adaptation to either coastal or inland habitats. Our study is among the first to show repeated allelic variation across climatic clines in a non-model organism.

Latitude-Induced and Behaviorally Thermoregulated Variations in Upper Thermal Tolerance of Two Anuran Species.

Simple SummaryThermal tolerance can help understand species’ response to climate change, but regional scale data is missing. We filled this gap by investigating intraspecific variations in the critical thermal maximum (CTmax) of Rana uenoi tadpoles collected from rice paddies and Bufo sachalinensis tadpoles collected from lakes, over a five-degree latitudinal gradient. We found a positive relationship between latitude and CTmax in R. uenoi tadpoles, although they did not display specific thermoregulatory behaviors. In contrast, none of the abiotic factors were related to CTmax in B. sachalinensis, but the tadpoles swam closer to the water surface when water temperature increased. Thus, R. uenoi displays a physiological adaptive response while B. sachalinensis behaviorally thermoregulate. This is important as species specific responses to climate change have to be understood for their conservation.Although thermal tolerance along geographical gradients gives an insight into species’ response to climate change, current studies on thermal tolerance are strongly skewed towards global-scale patterns. As a result, intraspecific variations are often assumed to be constant, despite a lack of evidence. To understand population-specific responses to thermal stress, we investigated the presence of intraspecific variations in the critical thermal maximum (CTmax) of tadpoles in two anuran species, Rana uenoi and Bufo sachalinensis. The study was conducted across a five-degree latitudinal gradient in the Republic of Korea. We exposed the tadpoles to increasing temperatures and recorded the CTmax for 270 R. uenoi individuals from 11 sites, collected in rice paddies, and for 240 B. sachalinensis individuals from ten sites, collected in reservoirs. We also recorded the swimming performance and behavior of the tadpoles when placed in an experimental apparatus during CTmax measurements. We then used linear regressions to determine the relationship between abiotic factors and CTmax. In R. uenoi, we found a positive relationship between latitude and CTmax, but the tadpoles did not display specific thermoregulatory behaviors. In B. sachalinensis, none of the abiotic factors such as climate and geographic coordinates were related to CTmax, but we detected a tendency to swim close to the water surface when water temperature was increasing. For R. uenoi, we tentatively relate the CTmax variability across the latitudinal gradient to a physiological adaptive response associated with habitat characteristics that are assumed to be fluctuating, as the species inhabits small water bodies prone to drying out. In the case of B. sachalinensis, the behavior observed may be linked to oxygen depletion and thermoregulation, as it may buffer temperature changes in the absence of physiological adjustment. These findings suggest that intra-specific variations in CTmax are greater than generally accounted for, and thermal conditions of natural environments are important for understanding thermal tolerance in ectothermic species. Our results highlight that species’ specific responses to climate warmings need to be studied to better protect species against climate change.

Adapting to climate with limited genetic diversity: Nucleotide, DNA methylation and microbiome variation among populations of the social spider Stegodyphus dumicola.

Understanding the role of genetic and nongenetic variants in modulating phenotypes is central to our knowledge of adaptive responses to local conditions and environmental change, particularly in species with such low population genetic diversity that it is likely to limit their evolutionary potential. A first step towards uncovering the molecular mechanisms underlying population-specific responses to the environment is to carry out environmental association studies. We associated climatic variation with genetic, epigenetic and microbiome variation in populations of a social spider with extremely low standing genetic diversity. We identified genetic variants that are associated strongly with environmental variation, particularly with average temperature, a pattern consistent with local adaptation. Variation in DNA methylation in many genes was strongly correlated with a wide set of climate parameters, thereby revealing a different pattern of associations than that of genetic variants, which show strong correlations to a more restricted range of climate parameters. DNA methylation levels were largely independent of cis-genetic variation and of overall genetic population structure, suggesting that DNA methylation can work as an independent mechanism. Microbiome composition also correlated with environmental variation, but most strong associations were with precipitation-related climatic factors. Our results suggest a role for both genetic and nongenetic mechanisms in shaping phenotypic responses to local environments.

Population level variation in reproductive development and output in the golden kelp Laminaria ochroleuca under marine heat wave scenarios

Thermal tolerance is often interpreted as a species-wide thermal niche in the absence of studies focusing on the adaptive potential of populations to exhibit differential thermal tolerance. Thus, considering intraspecific thermal plasticity, local adaptation or both between populations along distributional gradients when interpreting and predicting species responses to warming is imperative. Removing the effect of environmental histories by raising kelp gametophyte generations in vitro under common garden conditions allows unbiased comparison between population-specific adaptive variation under different environmental conditions. Following this approach, this study aims to detect (potentially) adaptive differentiation in microscopic life-stages (gametophytes) between populations of a temperate forest forming kelp, Laminaria ochroleuca from locations with distinct thermal conditions. Gametophytes from four geographically distinct populations were subjected to different temperature treatments (17, marine heat waves of 23, 25 and 27°C) and gametophyte survival during thermal stress as well as reproductive success and photosynthetic responses during recovery were investigated. Intraspecific variation in resilience and reproductive output to thermal stress was found in L. ochroleuca; gametophytes from the most northern population (Brittany, France) were the most thermally sensitive, with mortality onset at 23°C, whereas mortality in the remaining populations was only apparent at 27°C. Gametophytes from northern Spain and Morocco exhibited very low reproductive success during recovery from 23 and 25°C. However, when recovering from the highest thermal treatment (27°C) the reproductive development and sporophyte output was higher than in the gametophytes from France and Italy (Mediterranean). The population-specific responses of gametophyte resilience and reproductive success to temperature stress suggest genetic differentiation in response to variation in local thermal regimes.

Agreement of medicine and pharmacy students on quality of drug information

Objective: Drug information responses are usually given by pharmacists to physicians. These responses are intended to improve interprofessional care and patient outcomes. This study was conducted to assess if medicine and pharmacy students agree on the quality of drug information responses. Methods: All patient or population-specific responses created in 2021 by the pharmacy students during their final year drug information rotation at Thumbay University Hospital, United Arab Emirates were evaluated by three pharmacy students and a medical student of the next cohort. In 2021, a total of 148 patient or population-focused drug information responses were prepared. A content-validated assessment rubric with seven elements was used to assess each drug information response in 2022. SPSS version 26 was used to assess agreement between pharmacy and medicine students using Kappa statistics. Results: Quality of drug information was rated high (very much and rather much combined) by pharmacy and medicine students in a range of 61% to 90% for all quality elements. The same ratings of medicine and pharmacy students (agreement) were observed at more than 50% only for three quality elements between two pharmacy students with the medical student. Poor agreement exists between medicine and pharmacy students on their rating of the quality of drug information (Kappa <0.7). Some of these kappa coefficients had a p-value less than 0.05. Conclusion: Both medicine and pharmacy students rated drug information reports as of reasonable quality, but their agreements were poor on the quality of drug information. It shows the need for interprofessional education in experiential learning. Agreement on quality of drug information responses improved after the students completed an interprofessional drug information task. The authors recommend a full drug information rotation of medicine and pharmacy students.

New evidence for population-specific responses to drought events from tree ring chronologies of Pinus nigra ssp. laricio across the entire distribution range

• Growth-climate relationships were analysed in black pine (ssp. laricio ). • Drought effects on stem radial growth were studied in representative populations. • Positive impacts of precipitation in spring/summer, but negative in winter, were found. • Corsican populations were more sensitive to drought than populations in southern Italy. • Older trees were more resistant to drought events than younger trees. The increased frequency and severity of drought events due to climate warming is negatively affecting tree radial growth, particularly in drought-prone regions, such as, e.g., the Mediterranean. In this climate change hotspot, populations of the same tree species may show different growth responses to climate, due to the great variety of microclimates and environments that characterise this biogeographic region. In this study, we analysed growth-climate relationships and growth responses to drought events (i.e., resistance, recovery, and resilience) in 13 forest stands of black pine ( Pinus nigra Arnold), encompassing the whole and peculiar distribution range of the ssp. laricio (Calabria, Sicily, Sardinia, and Corsica). Analysis focussed on the 1981–2010 period, which is commonly covered at all sites. Stem radial growth of trees increased under a positive spring/summer water balance. However, abundant winter precipitation had a negative impact on stem radial growth. Populations in Corsica were more sensitive to drought, showing lower resistance and resilience than those in Sicily and Sardinia. Older trees were more resistant to drought events than younger trees. Our results highlight that population-specific responses to drought events are mainly explained by tree age and local environment, suggesting geographically related patterns in tree growth and forest productivity correspond to different populations. Intraspecific variability in sensitivity to drought events should be included in species distribution models to predict the range of forest productivity responses to climate change.

Do Freshwater Turtles Use Rainfall to Increase Nest Success?

Rainfall following turtle nest construction has long been believed to increase nest survival by its effects on reducing the location cues used by nest predators. However, it is unclear if this is generally the case and if nesting turtles actively use this mechanism to increase their reproductive fitness by deliberately timing nesting to occur before or during rainfall. To address this question, we reviewed studies that examined freshwater turtle nesting behavior and nest predation rates in relation to rainfall. We supplemented our review with data on rainfall and nesting patterns from a 12-year study of two nesting populations of Ouachita Map Turtles (Graptemys ouachitensis). Our review revealed a diversity of responses in rainfall effects on predation and in the propensity for turtles to nest in association with rain. Our mixed findings could reflect a diversity of species- or population-specific responses, local adaptations, species composition of predator community, confounding abiotic factors (e.g., temperature decreases after rainfall) or methodology (e.g., most studies did not quantify rainfall amounts). Our case study on map turtles found very high yearly predation rates (75–100%), precluding our ability to rigorously analyze the association between nest predation and rainfall. However, close examination of the exact timing of both rainfall and predation revealed significantly lower predation rates when rain fell within 24 h after nesting, indicating that rainfall during or after nesting may reduce nest predation. Despite this effect, the best fitted model explaining the propensity to nest found that map turtles were more likely to nest after dry days than after days with rainfall, suggesting that rainfall was not a major factor driving turtles to nest in our populations. In both our review and in our map turtle populations there was little evidence that turtles can anticipate rainfall and nest prior to it occurring (e.g., in response to falling barometric pressure).

Effects of selenium treatment on endogenous antioxidant capacity in signal crayfish (Pacifastacus leniusculus)

Selenium is an essential element that plays a role in numerous physiological processes and is critical for the maintenance of a strong endogenous antioxidant system. Previous work by our research group reported that the organophosphate pesticide dimethoate decreased glutathione S-transferase activity (GST) in signal crayfish (Pacifastacus leniusculus) collected from the Boise River (Idaho, USA). The goals of this study were to examine whether: 1) sodium selenite modulated the endogenous antioxidants glutathione (GSH), metallothionein (MT), and glutathione S-transferase (GST), thus suggesting a mechanism of antioxidant activity, 2) dimethoate exposure (pro-oxidant stressor) decreased GST activity in a localized population of signal crayfish collected from the Snake River (Idaho, USA), and 3) investigate whether selenium cotreatment ameliorated the adverse effects of dimethoate on GST activity due to the antioxidant properties associated with selenium. Selenium and dimethoate treatments (and co-treatments) did not modulate GSH or MT concentrations at the doses tested in this study. Furthermore, neither selenium nor dimethoate was factors influencing GST activity, and no interaction was found between the treatments. While our results did not support our predictions, they are suggestive and future studies examining the protective role of selenium in pro-oxidant exposure in this species are warranted. Population-specific responses as well as seasonal variations in endogenous antioxidant expression should be considered in future experiments.

Variation in Demography and Life-History Strategies Across the Range of a Declining Mountain Bird Species

Species- and population-specific responses to their environment may depend to a large extent on the spatial variation in life-history traits and in demographic processes of local population dynamics. Yet, those parameters and their variability remain largely unknown for many cold-adapted species, which are exposed to particularly rapid rates of environmental change. Here, we compared the demographic traits and dynamics for an emblematic bird species of European mountain ecosystems, the ring ouzel (Turdus torquatus). Using integrated population models fitted in a Bayesian framework, we estimated the survival probability, productivity and immigration of two populations from the Western European Alps, in France (over 11 years) and Switzerland (over 6 years). Juvenile apparent survival was lower and immigration rate higher in the Swiss compared to the French population, with the temporal variation in population growth rate driven by different demographic processes. Yet, when compared to populations in the northwestern part of the range, in Scotland, these two Alpine populations both showed a much lower productivity and higher adult survival, indicating a slower life-history strategy. Our results suggest that demographic characteristics can substantially vary across the discontinuous range of this passerine species, essentially due to contrasted, possibly locally evolved life-history strategies. This study therefore raises the question of whether flexibility in life-history traits is widespread among boreo-alpine species and if it might provide adaptive potential for coping with current environmental change.

The proximate sources of genetic variation in body size plasticity: The relative contributions of feeding behaviour and development in Drosophila melanogaster

Body size is a key life-history trait that influences many aspects of an animal’s biology and is shaped by a variety of factors, both genetic and environmental. While we know that locally-adapted populations differ in the extent to which body size responds plastically to environmental conditions like diet, we have a limited understanding of what causes these differences. We hypothesized that populations could differ in the way body size responds to nutrition either by modulating growth rate, development time, feeding rate, or a combination of the above. Using three locally-adapted populations of Drosophila melanogaster from along the east coast of Australia, we investigated body size plasticity across five different diets. We then assessed how these populations differed in feeding behaviour and developmental timing on each of the diets. We observed population-specific plastic responses to nutrition for body size and feeding rate, but not development time. However, differences in feeding rate did not fully explain the differences in the way body size responded to diet. Thus, we conclude that body size variation in locally-adapted populations is shaped by a combination of growth rate and feeding behaviour. This paves the way for further studies that explore how differences in the regulation of the genetic pathways that control feeding behaviour and growth rate contribute to population-specific responses of body size to diet.

Feather, But Not Plasma, Glucocorticoid Response to Artificial Light at Night Differs between Urban and Forest Blue Tit Nestlings.

Urbanization drives phenotypic variation in many animal species. This includes behavioral and physiological traits such as activity patterns, aggression, and hormone levels. A current challenge of urban evolutionary ecology is to understand the environmental drivers of phenotypic variation in cities. Moreover, do individuals develop tolerance to urban environmental factors, which underlie adaptative responses and contribute to the evolution of urban populations? Most available evidence comes from correlative studies and rare experiments where a single urban-related environmental factor has been manipulated in the field. Here we present the results of an experiment in which we tested for differences in the glucocorticoid (CORT) response of urban and rural blue tits nestlings (Cyanistes caeruleus) to artificial light at night (ALAN). ALAN has been suggested to alter CORT response in several animal species, but to date no study has investigated whether this effect of ALAN differs between urban and rural populations. Immediately after hatching, urban and forest broods were either exposed to 2 lux of ALAN (using an LED source mounted inside the nestbox) or received no treatment (dark control). The experiment lasted until the chicks fledged. When the chicks were 13 days old plasma samples were collected to measure baseline CORT concentrations, and feather samples to provide an integrative measure of CORT during growth. Forest birds had higher plasma CORT (pCORT) concentrations than their urban counterparts, irrespective of whether they were exposed to ALAN or not. Conversely, we found population-specific responses of feather CORT to ALAN. Specifically, urban birds that received ALAN had increased feather CORT compared with the urban dark controls, while the opposite was true for the forest birds. pCORT concentrations were negatively associated to fledging success, irrespective of population and treatment, while feather CORT was positively associated to fledging success in broods exposed to ALAN, but negatively in the dark control ones. Our results demonstrate that ALAN can play a role in determination of the glucocorticoid phenotype of wild animals, and may thus contribute to phenotypic differences between urban and rural animals.

Transcriptomic signatures of temperature adaptation in the eastern oyster Crassostrea virginica.

The large geographic distribution of the eastern oyster, Crassostrea virginica, makes it an ideal species to test how populations have adapted to latitudinal gradients in temperature. Despite inhabiting distinct thermal regimes, populations of C. virginica near the species' southern and northern geographic range show no population differences in their physiological response to temperature. In this study, we used comparative transcriptomics to understand how oysters from either end of the species' range maintain enantiostasis across three acclimation temperatures (10, 20, and 30°C). With this approach, we identified genes that were differentially expressed in response to temperature between individuals of C. virginica collected from New Brunswick, Canada and Louisiana, USA. We observed a core set of genes whose expression responded to temperature in both populations, but also an even larger set of genes with expression patterns that were unique to each population. Intriguingly, the genes with population-specific responses to temperature had elevated FST and Ka/Ks ratios compared to the genome-wide average. In contrast, genes showing only a response to temperature were found to only have elevated FST values suggesting that divergent FST may be due to selection on linked regulatory regions rather than positive selection on protein coding regions. Taken together, our results suggest that, despite coarse-scale physiological similarities, natural selection has shaped divergent gene expression responses to temperature in geographically separated populations of this broadly eurythermal marine invertebrate.

Geographic differences in gut microbiota composition impact susceptibility to enteric infection.

SummaryLarge-scale studies of human gut microbiomes have revealed broad differences in composition across geographically distinct populations. Yet, studies examining impacts of microbiome composition on various health outcomes typically focus on single populations, posing the question of whether compositional differences between populations translate into differences in susceptibility. Using germ-free mice humanized with microbiome samples from 30 donors representing three countries, we observe robust differences in susceptibility to Citrobacter rodentium, a model for enteropathogenic Escherichia coli infections, according to geographic origin. We do not see similar responses to Listeria monocytogenes infections. We further find that cohousing the most susceptible and most resistant mice confers protection from C. rodentium infection. This work underscores the importance of increasing global participation in microbiome studies related to health outcomes. Diverse cohorts are needed to identify both population-specific responses to specific microbiome interventions and to achieve broader-reaching biological conclusions that generalize across populations.

The genomics of rapid climatic adaptation and parallel evolution in North American house mice.

Parallel changes in genotype and phenotype in response to similar selection pressures in different populations provide compelling evidence of adaptation. House mice (Mus musculus domesticus) have recently colonized North America and are found in a wide range of environments. Here we measure phenotypic and genotypic differentiation among house mice from five populations sampled across 21° of latitude in western North America, and we compare our results to a parallel latitudinal cline in eastern North America. First, we show that mice are genetically differentiated between transects, indicating that they have independently colonized similar environments in eastern and western North America. Next, we find genetically-based differences in body weight and nest building behavior between mice from the ends of the western transect which mirror differences seen in the eastern transect, demonstrating parallel phenotypic change. We then conduct genome-wide scans for selection and a genome-wide association study to identify targets of selection and candidate genes for body weight. We find some genomic signatures that are unique to each transect, indicating population-specific responses to selection. However, there is significant overlap between genes under selection in eastern and western house mouse transects, providing evidence of parallel genetic evolution in response to similar selection pressures across North America.

Harbour Seals: Population Structure, Status, and Threats in a Rapidly Changing Environment

The harbour seal (Phoca vitulina) is the world’s most widely distributed pinniped species ranging from temperate to Arctic regions (30–78.5° N in the Atlantic, 28–61.2° N in the Pacific), but no detailed overview of the species status exists. The aims of this review are to (i) provide current information on the genetic structure, population status, and threats; (ii) review potential consequences of a changing climate; and (iii) identify knowledge gaps to guide future research and monitoring. Although the species is globally abundant, wide differences exist across the species’ broad range. As climate warms, populations at the edges of the species’ distributional range are likely to be more affected. The primary climate-related drivers include: (i) changes in weather patterns, which can affect thermoregulation; (ii) decrease in availability of haul-out substrates; (iii) large-scale changes in prey availability and inter-specific competition; (iv) shifts in the range of pathogens; (v) increase in temperature favouring the biotransformation of contaminants; and (vi) increased exposure to pollutant from increased freshwater run-off. Multiple anthropogenic stressors may collectively impact some populations. Coordinated monitoring efforts across and within regions is needed. This would allow for a spatially explicit management approach including population-specific responses to known stressors.