Permafrost Cores Research Articles

Anisotropy in small-strain shear modulus of permafrost at rising temperatures

Perennially frozen soils, or permafrost, exist extensively on the Arctic Coastal Plain of Alaska and can reach up to 600 m deep. This paper describes the cryostructure of permafrost cores obtained from a deep borehole in this area, presents the shear wave velocities measured in different directions by the bender element method, exhibits the small-strain shear moduli of clay, silt and sand permafrost specimens from −10 °C to 20 °C, and discusses the anisotropy in the small-strain shear modulus of permafrost in both frozen and thawed states. It was found that the specimen site is covered by a few meters of syngenetic permafrost with massive wedge ice, below which is a deep epigenetic permafrost with numerous visible ice lenses primarily located in the top 120 m, oriented in horizontal or subhorizontal directions. The shear modulus ratio found for thawed clay permafrost falls in the higher end of those reported for natural or reconstituted clays, while the ratio for thawed sand permafrost is clearly higher than those previously reported. The anisotropy in the small-strain shear modulus was found to be strongly temperature dependent. The temperature dependency of anisotropy can be attributed to volumetric expansion, occurring during the freezing of pore water followed by the thawing of pore ice that, respectively, disrupts then allows the recovery of the preferential alignment of soil particles, or fabric, formed during geological sedimentation processes. In addition, deep permafrost cores with shear stiffness comparable to hard rock exhibit a very low stiffness ratio Ghh/Gvh, likely due to the in situ geostatic stress-induced anisotropy in pore ice crystals.

Genetic Analysis and Genealogy of Ancient Bone Samples

The analysis of ancient DNA (aDNA) can inspire both the public and the scientific community. Knowing about ancient human genomes and comparing them with those of modern humans can give us a new perspective on evolution and the migration of humans over time. aDNA is DNA isolated from ancient specimens. It can also be loosely described as any DNA recovered from biological samples that have not been preserved specifically for later DNA analysis. Examples include DNA recovered from archaeological and historical skeletal material, mummified tissues, archival collections of non-frozen medical specimens, preserved plant remains, ice and permafrost cores, Holocene plankton in marine and lake sediments, and so on. Due to considerable anthropological, archaeological, and public interest, human remains receive ample attention from the DNA community. Genetic genealogy is the use of DNA testing in combination with traditional genealogical methods to infer relationships between individuals and to find ancestors. Genetic genealogy involves the use of genealogical DNA testing to determine the level and type of genetic relationship between individuals. DNA markers such as autosomal single nucleotide polymorphisms (SNPs), Y SNPs, and mitochondrial DNA (mtDNA) SNPs are used. By analyzing the sequence of mtDNA and the Y-chromosome, the path of human migration throughout history and the common ancestor of humans can be identified. mtDNA analysis is a field of research in genetics and molecular archaeology that is efficient in less than ideal conditions, such as with biologically degraded materials. The mtDNA molecule not only has a high copy number, but it can also be extracted from very decayed biological specimens. Its D-loop region is polymorphic, consisting of two hypervariable regions (HVI and HVII) with a large variety in different human populations. The analysis of such mtDNA regions using ancient excavated human bones will determine the genetic composition of human mtDNA known as haplogroups and can be used to identify ancient ethnic groups, trace descendants of ancestors, and follow man’s migration trails.

Substrate potential of last interglacial to Holocene permafrost organic matter for future microbial greenhouse gas production

Abstract. In this study the organic matter (OM) in several permafrost cores from Bol'shoy Lyakhovsky Island in NE Siberia was investigated. In the context of the observed global warming the aim was to evaluate the potential of freeze-locked OM from different depositional ages to act as a substrate provider for microbial production of greenhouse gases from thawing permafrost. To assess this potential, the concentrations of free and bound acetate, which form an appropriate substrate for methanogenesis, were determined. The largest free-acetate (in pore water) and bound-acetate (organic-matrix-linked) substrate pools were present in interstadial marine isotope stage (MIS) 3 and stadial MIS 4 Yedoma permafrost deposits. In contrast, deposits from the last interglacial MIS 5e (Eemian) contained only a small pool of substrates. The Holocene (MIS 1) deposits revealed a significant bound-acetate pool, representing a future substrate potential upon release during OM degradation. Additionally, pyrolysis experiments on the OM allocated an increased aliphatic character to the MIS 3 and 4 Late Pleistocene deposits, which might indicate less decomposed and presumably more easily degradable OM. Biomarkers for past microbial communities, including those for methanogenic archaea, also showed the highest abundance during MIS 3 and 4, which indicated OM-stimulated microbial degradation and presumably greenhouse gas production during time of deposition. On a broader perspective, Arctic warming will increase and deepen permafrost thaw and favor substrate availability from older freeze-locked permafrost deposits. Thus, the Yedoma deposits especially showed a high potential for providing substrates relevant for microbial greenhouse gas production.

Greenhouse gas released from the deep permafrost in the northern Qinghai-Tibetan Plateau

Deep carbon pool in permafrost regions is an important component of the global terrestrial carbon cycle. However, the greenhouse gas production from deep permafrost soils is not well understood. Here, using soils collected from 5-m deep permafrost cores from meadow and wet meadow on the northern Qinghai-Tibetan Plateau (QTP), we investigated the effects of temperature on CO2 and N2O production under aerobic incubations and CH4 production under anaerobic incubations. After a 35-day incubation, the CO2, N2O and CH4 production at −2 °C to 10 °C were 0.44~2.12 mg C-CO2/g soil C, 0.0027~0.097 mg N-N2O/g soil N, and 0.14~5.88 μg C-CH4/g soil C, respectively. Greenhouse gas production in deep permafrost is related to the C:N ratio and stable isotopes of soil organic carbon (SOC), whereas depth plays a less important role. The temperature sensitivity (Q10) values of the CO2, N2O and CH4 production were 1.67–4.15, 3.26–5.60 and 5.22–10.85, without significant differences among different depths. These results indicated that climate warming likely has similar effects on gas production in deep permafrost and surface soils. Our results suggest that greenhouse gas emissions from both the deep permafrost and surface soils to the air will increase under future climate change.

Contrasting above- and belowground organic matter decomposition and carbon and nitrogen dynamics in response to warming in High Arctic tundra.

Tundra regions are projected to warm rapidly during the coming decades. The tundra biome holds the largest terrestrial carbon pool, largely contained in frozen permafrost soils. With warming, these permafrost soils may thaw and become available for microbial decomposition, potentially providing a positive feedback to global warming. Warming may directly stimulate microbial metabolism but may also indirectly stimulate organic matter turnover through increased plant productivity by soil priming from root exudates and accelerated litter turnover rates. Here, we assess the impacts of experimental warming on turnover rates of leaf litter, active layer soil and thawed permafrost sediment in two high-arctic tundra heath sites in NE-Greenland, either dominated by evergreen or deciduous shrubs. We incubated shrub leaf litter on the surface of control and warmed plots for 1 and 2years. Active layer soil was collected from the plots to assess the effects of 8years of field warming on soil carbon stocks. Finally, we incubated open cores filled with newly thawed permafrost soil for 2years in the active layer of the same plots. After field incubation, we measured basal respiration rates of recovered thawed permafrost cores in the lab. Warming significantly reduced litter mass loss by 26% after 1year incubation, but differences in litter mass loss among treatments disappeared after 2years incubation. Warming also reduced litter nitrogen mineralization and decreased the litter carbon to nitrogen ratio. Active layer soil carbon stocks were reduced 15% by warming, while soil dissolved nitrogen was reduced by half in warmed plots. Warming had a positive legacy effect on carbon turnover rates in thawed permafrost cores, with 10% higher respiration rates measured in cores from warmed plots. These results demonstrate that warming may have contrasting effects on above- and belowground tundra carbon turnover, possibly governed by microbial resource availability.

Geomorphological and cryostratigraphical analyses of the Zackenberg Valley, NE Greenland and significance of Holocene alluvial fans

In High Arctic northern Greenland, future responses to climatic changes are poorly understood on a landscape scale. Here, we present a study of the geomorphology and cryostratigraphy in the Zackenberg Valley in NE Greenland (74°N) containing a geomorphological map and a simplified geocryological map, combined with analyses of 13 permafrost cores and two exposures. Cores from a solifluction sheet, alluvial fans, and an emerged delta were studied with regards to cryostructures, ice and total carbon contents, grain size distribution, and pore water electrical conductivity; and the samples were AMS 14C dated. The near-surface permafrost on slopes and alluvial fans is ice rich, as opposed to the ice-poor epigenetic permafrost in the emerged delta. Ground ice and carbon distribution are closely linked to sediment transport processes, which largely depend on lithology and topography. Holocene alluvial fans on the lowermost hillslopes, covering 12% of the study area, represent paleoenvironmental archives. During the contrasting climates of the Holocene, the alluvial fans continued to aggrade – through the warmer early Holocene Optimum, the colder late Holocene, and the following climate warming – and by 0.45mma−1, on average. This is caused by three factors: sedimentation, ground ice aggradation, and vegetation growth and is reflected by AMS 14C dating and continuously alternating cryostructures. Highly variable sedimentation rates in space and time at the alluvial fans have been detected. This is also reflected by alternating lenticular and microlenticular cryostructures indicating syngenetic permafrost aggradation during sedimentation with suspended and organic-matrix cryostructures indicating quasi-syngenetic permafrost aggradation in response to vegetation growth in periods with reduced or no sedimentation. Over time, this causes organic matter to become buried, indicating that alluvial fans represent effective carbon sinks that have previously been overlooked.

The development of permafrost bacterial communities under submarine conditions

Submarine permafrost is more vulnerable to thawing than permafrost on land. Besides increased heat transfer from the ocean water, the penetration of salt lowers the freezing temperature and accelerates permafrost degradation. Microbial communities in thawing permafrost are expected to be stimulated by warming but how they develop under submarine conditions is completely unknown. We used the unique records of two submarine permafrost cores from the Laptev Sea on the East Siberian Arctic Shelf, inundated about 540 and 2500 years ago, to trace how bacterial communities develop depending on duration of the marine influence and pore water chemistry. Combined with geochemical analysis, we quantified total cell numbers and bacterial gene copies, and determined the community structure of bacteria using deep sequencing of the bacterial 16S rRNA gene. We show that submarine permafrost is an extreme habitat for microbial life deep below the seafloor with changing thermal and chemical conditions. Pore water chemistry revealed different pore water units reflecting the degree of marine influence and stages of permafrost thaw. Millennia after inundation by sea water, bacteria stratify into communities in permafrost, marine-affected permafrost, and seabed sediments. In contrast to pore water chemistry, the development of bacterial community structure, diversity and abundance in submarine permafrost appears site-specific, showing that both sedimentation and permafrost thaw histories strongly affect bacteria. Finally, highest microbial abundance was observed in the ice-bonded seawater unaffected but warmed permafrost of the longer inundated core, suggesting that permafrost bacterial communities exposed to submarine conditions start to proliferate millennia after warming.

Cryostratigraphy and the sublimation unconformity in permafrost from an ultraxerous environment, University Valley, McMurdo Dry Valleys of Antarctica.

The cryostratigraphy of permafrost in ultraxerous environments is poorly known. In this study, icy permafrost cores from University Valley (McMurdo Dry Valleys, Antarctica) were analyzed for sediment properties, ground-ice content, types and distribution of cryostructures and presence of unconformities. No active layer exists in the valley, but the ice table, a sublimation unconformity, ranges from 0 to 60 cm depth. The sediments are characterized as a medium sand, which classifies them as low to non-frost susceptible. CT scan images of the icy permafrost cores revealed composite cryostructures that included the structureless, porous visible, suspended and crustal types. These cryostructures were observed irrespective of ground-ice origin (vapour deposited and freezing of snow meltwater), suggesting that the type and distribution of cryostructures could not be used as a proxy to infer the mode of emplacement of ground ice. Volumetric ice content derived from the CT scan images underestimated measured volumetric ice content, but approached measured excess ice content. A paleo-sublimation unconformity could not be detected from a change in cryostructures, but could be inferred from an increase in ice content at the maximum predicted ice table depth. This study highlights some of the unique ground ice processes and cryostructures in ultraxerous environments.

Potential microbial contamination during sampling of permafrost soil assessed by tracers

Drilling and handling of permanently frozen soil cores without microbial contamination is of concern because contamination e.g. from the active layer above may lead to incorrect interpretation of results in experiments investigating potential and actual microbial activity in these low microbial biomass environments. Here, we present an example of how microbial contamination from active layer soil affected analysis of the potentially active microbial community in permafrost soil. We also present the development and use of two tracers: (1) fluorescent plastic microspheres and (2) Pseudomonas putida genetically tagged with Green Fluorescent Protein production to mimic potential microbial contamination of two permafrost cores. A protocol with special emphasis on avoiding microbial contamination was developed and employed to examine how far microbial contamination can penetrate into permafrost cores. The quantity of tracer elements decreased with depth into the permafrost cores, but the tracers were detected as far as 17 mm from the surface of the cores. The results emphasize that caution should be taken to avoid microbial contamination of permafrost cores and that the application of tracers represents a useful tool to assess penetration of potential microbial contamination into permafrost cores.

Distribution and origin of ground ice in University Valley, McMurdo Dry Valleys, Antarctica

AbstractGround ice is one of the most important and dynamic geologic components of permafrost; however, few studies have investigated the distribution and origin of ground ice in the McMurdo Dry Valleys of Antarctica. In this study, ice-bearing permafrost cores were collected from 18 sites in University Valley, a small hanging glacial valley in the Quartermain Mountains. Ground ice was found to be ubiquitous in the upper 2 m of permafrost soils, with excess ice contents reaching 93%, but ground ice conditions were not homogeneous. Ground ice content was variable within polygons and along the valley floor, decreasing in the centres of polygons and increasing in the shoulders of polygons towards the mouth of the valley. Ground ice also had different origins: vapour deposition, freezing of partially evaporated snow meltwater and buried glacier ice. The variability in the distribution and origin of ground ice can be attributed to ground surface temperature and moisture conditions, which separate the valley into distinct zones. Ground ice of vapour-deposition origin was predominantly situated in perennially cryotic zones, whereas ground ice formed by the freezing of evaporated snow meltwater was predominantly found in seasonally non-cryotic zones.

Microbial lipid signatures and substrate potential of organic matter in permafrost deposits: Implications for future greenhouse gas production

AbstractA terrestrial permafrost core from Buor Khaya in northern Siberia comprising deposits of Late Pleistocene to Early Holocene age has been investigated to characterize living and past microbial communities with respect to modern and paleoclimate environmental conditions and to evaluate the potential of the organic matter (OM) for greenhouse gas generation. Microbial life markers—intact phospholipids and phospholipid fatty acids—are found throughout the entire core and indicate the presence of living microorganisms also in older permafrost deposits. Biomarkers for past microbial communities (branched and isoprenoid glycerol dialkyl glycerol tetraether as well as archaeol) reveal links between increased past microbial activity and intervals of high OM accumulation accompanied by increased OM quality presumably caused by local periods of moister and warmer environmental conditions. Concentrations of acetate as an excellent substrate for methanogenesis are used to assess the OM quality with respect to microbial degradability for greenhouse gas production. For this purpose two acetate pools are determined: the pore water acetate and OM bound acetate. Both depth profiles reveal similarities to the OM content and quality indicating a link between the amount of the stored OM and the potential to provide substrates for microbial greenhouse gas production. The data suggest that OM stored in the permafrost deposits is not much different in terms of OM quality than the fresh surface organic material. Considering the expected increase of permafrost thaw due to climate warming, this implies a potentially strong impact on greenhouse gas generation from permafrost areas in future with positive feedback on climate variation.

Bacterial production in subarctic peatland lakes enriched by thawing permafrost

Abstract. Peatlands extend over vast areas of the northern landscape. Within some of these areas, lakes and ponds are changing in size as a result of permafrost thawing and erosion, resulting in mobilization of the carbon-rich peatland soils. Our aims in the present study were to characterize the particle, carbon and nutrient regime of a set of thermokarst (thaw) lakes and their adjacent peatland permafrost soils in a rapidly degrading landscape in subarctic Québec, Canada, and by way of fluorescence microscopy, flow cytometry, production measurements and an in situ enrichment experiment, determine the bacterial characteristics of these waters relative to other thaw lakes and rock-basin lakes in the region. The soil active layer in a degrading palsa (peatland permafrost mound) adjacent to one of the lakes contained an elevated carbon content (51 % of dry weight), high C : N ratios (17 : 1 by mass), and large stocks of other elements including N (3 % of dry weight), Fe (0.6 %), S (0.5 %), Ca (0.5 %) and P (0.05 %). Two permafrost cores were obtained to a depth of 2.77 m in the palsa, and computerized tomography scans of the cores confirmed that they contained high concentrations (> 80 %) of ice. Upon thawing, the cores released nitrate and dissolved organic carbon (from all core depths sampled), and soluble reactive phosphorus (from bottom depths), at concentrations well above those in the adjacent lake waters. The active layer soil showed a range of particle sizes with a peak at 229 µm, and this was similar to the distribution of particles in the upper permafrost cores. The particle spectrum for the lake water overlapped with those for the soil, but extended to larger (surface water) or finer (bottom water) particles. On average, more than 50 % of the bacterial cells and bacterial production was associated with particles > 3 µm. This relatively low contribution of free-living cells (operationally defined as the < 1 µm fraction) to bacterial production was a general feature of all of the northern lakes sampled, including other thaw lakes and shallow rock-basin lakes (average ± SE of 25 ± 6 %). However, a distinguishing feature of the peatland thaw lakes was significantly higher bacterial specific growth rates, which averaged 4 to 7 times higher values than in the other lake types. The in situ enrichment experiment showed no difference between organic carbon or phosphorus enrichment treatments at day 5 relative to the control, however there was an apparent increase in bacterial growth rates between days 1 and 5 in the soil and the carbon plus phosphorus enrichments. Collectively these results indicate that particles, nutrients and carbon are released by degrading permafrost peatland soils into their associated thermokarst lakes, creating favorable conditions for production by particle-based as well as free-living aquatic bacterial communities. The reduced bacterial concentrations despite high cellular growth rates imply that there is control of their population size by loss-related factors such as grazing and viral lysis.

Evidence of multiple thermokarst lake generations from an 11 800‐year‐old permafrost core on the northern Seward Peninsula, Alaska

Permafrost degradation influences the morphology, biogeochemical cycling and hydrology of Arctic landscapes over a range of time scales. To reconstruct temporal patterns of early to late Holocene permafrost and thermokarst dynamics, site‐specific palaeo‐records are needed. Here we present a multi‐proxy study of a 350‐cm‐long permafrost core from a drained lake basin on the northern Seward Peninsula, Alaska, revealing Lateglacial to Holocene thermokarst lake dynamics in a central location of Beringia. Use of radiocarbon dating, micropalaeontology (ostracods and testaceans), sedimentology (grain‐size analyses, magnetic susceptibility, tephra analyses), geochemistry (total nitrogen and carbon, total organic carbon, δ13Corg) and stable water isotopes (δ18O, δD, d excess) of ground ice allowed the reconstruction of several distinct thermokarst lake phases. These include a pre‐lacustrine environment at the base of the core characterized by the Devil Mountain Maar tephra (22 800±280 cal. a BP, Unit A), which has vertically subsided in places due to subsequent development of a deep thermokarst lake that initiated around 11 800 cal. a BP (Unit B). At about 9000 cal. a BP this lake transitioned from a stable depositional environment to a very dynamic lake system (Unit C) characterized by fluctuating lake levels, potentially intermediate wetland development, and expansion and erosion of shore deposits. Complete drainage of this lake occurred at 1060 cal. a BP, including post‐drainage sediment freezing from the top down to 154 cm and gradual accumulation of terrestrial peat (Unit D), as well as uniform upward talik refreezing. This core‐based reconstruction of multiple thermokarst lake generations since 11 800 cal. a BP improves our understanding of the temporal scales of thermokarst lake development from initiation to drainage, demonstrates complex landscape evolution in the ice‐rich permafrost regions of Central Beringia during the Lateglacial and Holocene, and enhances our understanding of biogeochemical cycles in thermokarst‐affected regions of the Arctic.

Characterization of the prokaryotic diversity through a stratigraphic permafrost core profile from the Qinghai-Tibet Plateau

Permafrost on the Qinghai-Tibet Plateau is one of the most sensitive regions to climate warming, thus characterizing its microbial diversity and community composition may be important for understanding their potential responses to climate changes. Here, we investigated the prokaryotic diversity in a 10-m-long permafrost core from the Qinghai-Tibet Plateau by restriction fragment length polymorphism analysis targeting the 16S rRNA gene. We detected 191 and 17 bacterial and archaeal phylotypes representing 14 and 2 distinct phyla, respectively. Proteobacteria was the dominant bacterial phylum, while archaeal communities were characterized by a preponderance of Thaumarchaeota. Some of prokaryotic phylotypes were closely related to characterized species involved in carbon and nitrogen cycles, including nitrogen fixation, methane oxidation and nitrification. However, the majority of the phylotypes were only distantly related to known taxa at order or species level, suggesting the potential of novel diversity. Additionally, both bacterial α diversity and community composition changed significantly with sampling depth, where these communities mainly distributed according to core horizons. Arthrobacter-related phylotypes presented at high relative abundance in two active layer soils, while the deeper permafrost soils were dominated by Psychrobacter-related clones. Changes in bacterial community composition were correlated with most measured soil variables, such as carbon and nitrogen contents, pH, and conductivity.

A rock-physics investigation of unconsolidated saline permafrost: P-wave properties from laboratory ultrasonic measurements

Saline permafrost is sensitive to thermal disturbances and is prone to subsidence, which renders it a major source of geohazard in Arctic coastal environments. Seismic methods could be used to map and monitor saline permafrost at scales of geotechnical interests because of the ice-content dependencies of seismic properties. We have developed a comprehensive study of the ultrasonic P-wave properties (i.e., velocity and attenuation) of synthetic saline permafrost samples for a range of salinities and temperatures, and measurements conducted on a fine-grained permafrost core obtained from Barrow, Alaska. The resulting data consist of P-wave properties presented as functions of temperature and salinity. Notable observations include the following: P-wave velocities showed marked reductions in the presence of dissolved salts and complex variations resulting from the water-to-ice phase transitions; strong P-wave attenuation was present in the temperature intervals in which the samples were partially frozen. When presented as functions of ice saturation, the data sets lead us to two key findings: (1) neither a purely cementing nor a purely pore-filling model of the pore-scale distributions of ice could adequately fit the observed velocity data and (2) although the velocities increase monotonically with increasing ice saturations, P-wave attenuation reaches a maximum at intermediate ice saturations—contrary to the ordinary expectation of decreasing attenuation with increasing velocities. The observed ice-content dependencies of P-wave properties, along with the implications on the probable pore-scale distributions of ice, provide a valuable basis for rock-physics modeling, which in turn could facilitate seismic characterizations of saline permafrost.

Relative Roles of Deterministic and Stochastic Processes in Driving the Vertical Distribution of Bacterial Communities in a Permafrost Core from the Qinghai-Tibet Plateau, China.

Understanding the processes that influence the structure of biotic communities is one of the major ecological topics, and both stochastic and deterministic processes are expected to be at work simultaneously in most communities. Here, we investigated the vertical distribution patterns of bacterial communities in a 10-m-long soil core taken within permafrost of the Qinghai-Tibet Plateau. To get a better understanding of the forces that govern these patterns, we examined the diversity and structure of bacterial communities, and the change in community composition along the vertical distance (spatial turnover) from both taxonomic and phylogenetic perspectives. Measures of taxonomic and phylogenetic beta diversity revealed that bacterial community composition changed continuously along the soil core, and showed a vertical distance-decay relationship. Multiple stepwise regression analysis suggested that bacterial alpha diversity and phylogenetic structure were strongly correlated with soil conductivity and pH but weakly correlated with depth. There was evidence that deterministic and stochastic processes collectively drived bacterial vertically-structured pattern. Bacterial communities in five soil horizons (two originated from the active layer and three from permafrost) of the permafrost core were phylogenetically random, indicator of stochastic processes. However, we found a stronger effect of deterministic processes related to soil pH, conductivity, and organic carbon content that were structuring the bacterial communities. We therefore conclude that the vertical distribution of bacterial communities was governed primarily by deterministic ecological selection, although stochastic processes were also at work. Furthermore, the strong impact of environmental conditions (for example, soil physicochemical parameters and seasonal freeze-thaw cycles) on these communities underlines the sensitivity of permafrost microorganisms to climate change and potentially subsequent permafrost thaw.

Long‐term anoxia and release of ancient, labile carbon upon thaw of Pleistocene permafrost

AbstractThe fate of permafrost carbon upon thaw will drive feedbacks to climate warming. Here we consider the character and context of dissolved organic carbon (DOC) in yedoma permafrost cores from up to 20 m depth in central Alaska. We observed high DOC concentrations (4 to 129 mM) and consistent low molecular weight organic acid concentrations in three cores. We estimate a DOC production rate of 12 µmol DOC m−2 yr−1 based on model ages of up to ~200 kyr derived from uranium isotopes. Acetate C accounted for 24 ± 1% of DOC in all samples. This proportion suggests long‐term anaerobiosis and is likely to influence thaw outcomes due to biolability of acetate upon release in many environments. The combination of uranium isotopes, ammonium concentrations, and calcium concentrations explained 86% of the variation in thaw water DOC concentrations, suggesting that DOC production may be related to both reducing conditions and mineral dissolution over time.

Effect of Terrain Characteristics on Soil Organic Carbon and Total Nitrogen Stocks in Soils of Herschel Island, Western Canadian Arctic

Permafrost landscapes experience different disturbances and store large amounts of organic matter, which may become a source of greenhouse gases upon permafrost degradation. We analysed the influence of terrain and geomorphic disturbances (e.g. soil creep, active-layer detachment, gullying, thaw slumping, accumulation of fluvial deposits) on soil organic carbon (SOC) and total nitrogen (TN) storage using 11 permafrost cores from Herschel Island, western Canadian Arctic. Our results indicate a strong correlation between SOC storage and the topographic wetness index. Undisturbed sites stored the majority of SOC and TN in the upper 70 cm of soil. Sites characterised by mass wasting showed significant SOC depletion and soil compaction, whereas sites characterised by the accumulation of peat and fluvial deposits store SOC and TN along the whole core. We upscaled SOC and TN to estimate total stocks using the ecological units determined from vegetation composition, slope angle and the geomorphic disturbance regime. The ecological units were delineated with a supervised classification based on RapidEye multispectral satellite imagery and slope angle. Mean SOC and TN storage for the uppermost 1 m of soil on Herschel Island are 34.8 kg C m-2 and 3.4 kg N m-2, respectively. Copyright © 2015 John Wiley & Sons, Ltd.

Late Pleistocene and Holocene Vegetation History as Inferred From Palynological Investigations of the El’gygytgyn Lake Crater Permafrost Deposits

The results of the investigation of three permafrost cores from 3.6 Myr old Lake Elgygytgyn impact crater are presented here. Paleobotanical reconstructions are based on palinological studies and involve mostly late glacial time and Holocene. Our results are more detailed in comparison to the data based on lake sediments studies due to very low sedimentation rate in Lake Elgygytgyn. The age models rely on radiocarbon dates and also on correlations between our results with previously published data.

Functional characterization of bacteria isolated from ancient arctic soil exposes diverse resistance mechanisms to modern antibiotics.

Using functional metagenomics to study the resistomes of bacterial communities isolated from different layers of the Canadian high Arctic permafrost, we show that microbial communities harbored diverse resistance mechanisms at least 5,000 years ago. Among bacteria sampled from the ancient layers of a permafrost core, we isolated eight genes conferring clinical levels of resistance against aminoglycoside, β-lactam and tetracycline antibiotics that are naturally produced by microorganisms. Among these resistance genes, four also conferred resistance against amikacin, a modern semi-synthetic antibiotic that does not naturally occur in microorganisms. In bacteria sampled from the overlaying active layer, we isolated ten different genes conferring resistance to all six antibiotics tested in this study, including aminoglycoside, β-lactam and tetracycline variants that are naturally produced by microorganisms as well as semi-synthetic variants produced in the laboratory. On average, we found that resistance genes found in permafrost bacteria conferred lower levels of resistance against clinically relevant antibiotics than resistance genes sampled from the active layer. Our results demonstrate that antibiotic resistance genes were functionally diverse prior to the anthropogenic use of antibiotics, contributing to the evolution of natural reservoirs of resistance genes.