Peatland Soils Research Articles

Effects of burning on vegetation, soil physicochemistry and prokaryotic microbial communities in surface and subsurface peat

Prescribed burning is a common management strategy in peatlands that has the potential to affect soil physicochemistry, alter biogeochemical cycles and trigger changes in vegetation structure. How burning affects prokaryotic community composition across different soil profiles is not well understood. This study explored the effects of prescribed burning on the diversity of prokaryotic communities in peat soils. Soil samples were collected from Moor House Nature Reserve, UK, a long-term monitoring site initiated in 1954 subject to three burning treatments: Burning at short rotations every 10 years, burning at long rotations every 20 years and a non-burn control. Observed species richness for archaea was highest in the topsoil of the non-burn control plots and highest for bacteria in the topsoil of the non-burn control and plots under a long rotation regime. Community composition was significantly different between different burn treatments and soil depth. Archaeal community structure was shaped by NH4+ and pH in the topsoil; by Pb, moisture and Al in the 20–40 cm profile; and by total N, total C, Al, Ca, Fe and pH in the 40–60 cm profile. Bacterial community structure was shaped by NH4+, heather cover, pH and Mg in the topsoil; by Fe, K and Pb in the 20–40 cm profile; and by Al, Ca and Fe in the 40–60 cm profile. A co-occurrence network analysis revealed that the topsoil of the non-burn control plots had a more complex network structure with more positive links than those under a rotational burn, but a higher average connectivity with a higher number of negative links was observed in the long rotation 20–40 cm profile. The results provide a new insight into the response processes of soil prokaryotic communities to burning in peatland soils, providing valuable knowledge that can support the evaluation and management of ecosystem services in peatlands.

Prevalence and Diversity of Plant Parasitic Nematodes in Irish Peatlands

The prevalence of plant parasitic nematodes (PPN) in the Irish peatlands was investigated in five different peatland habitats—raised bog, cutover scrub/woodlands, fens and peat grasslands, which were further sub-categorised into fourteen different sub-habitats. Within the raised bog habitat were healthy bog hummock (HBH), healthy bog lawn (HBL), degraded bog hummock (DBH) and degraded bog lawn (DBL) and the fen habitats were fen peat (FP) and rich fen peat (R-FP). Cutover scrub or woodland habitat included cutover scrub rewetted (C-RW), cutover scrub non-rewetted (C-NRW), woodlands rewetted (W-RW) and woodlands non-rewetted (W-NRW). Grassland included wasted peat (WP), rough grazing (RG-I) and improved fen peat grassland (IFPG-RW and IFPG-NRW). Soil samples from peatlands were all collected between July and December 2023 when the temperature ranged from 12 to 20 °C. One half of each sample was used for molecular nematode analysis and the other half for morphological identification of nematodes. For the morphological identification, a specific nematode extraction protocol was optimised for peatland soils, and the extracted nematodes were fixed onto slides to be studied under a high-power light microscope. Subsequently, the other part of the soil was processed to isolate total DNA, from which the 18S rRNA gene was sequenced for the identification of nematode taxa. The extracted DNA was also used for randomly amplified polymorphic DNA (RAPD) fingerprinting analysis to determine banding patterns that could classify different bog habitats based on PPN random primers. Compared to that in the climax habitats (HBH, HBL, DBH, DBL, FP, R-FP), PPN prevalence was recorded as being higher in grasslands (WP, RG-I, IFPG-RW and IFPG-NRW) and scrub/woodland ecosystems (C-RW, C-NRW, W-RW, W-NRW). The results indicate that nematode populations are different across the various bog habitats. Emerging and current quarantine PPN belonging to the families Pratylenchidae, Meloidogynidae, Anguinidae and Heteroderidae were noted to be above the threshold limits mentioned under EPPO guidelines, in grassland and wooded peatland habitats. Future actions for PPN management may need to be considered, along with the likelihood that these PPN might impact future paludiculture and other crops and trees growing in nearby agricultural lands.

Higher Stability of Soil Organic Matter near the Permafrost Table in a Peatland of Northeast China

Understanding the stability of soil organic matter (SOM) is essential for making accurate predictions regarding carbon release rates. However, there is limited information on the role of chemical composition of dissolved organic matter (DOM) in SOM stability. To address this gap, the peatland soil profile in the discontinuous frozen soil region of Northeast China was selected as the focus of this research, and a comprehensive analysis was conducted on the differences between the molecular composition of DOM and the stability of SOM. The results indicate a significant carbon accumulation phenomenon near the permafrost table. Through analyses using TG-50, δ13C, and δ15N, it was determined that SOM near the permafrost table exhibits high stability, whereas SOM within the permafrost layer demonstrates poor stability. Investigations utilizing UV-vis, 3D-EEM, FT-IR, and 1H-NMR technologies revealed that DOM near the permafrost table is of high quality and highly aromatic. Furthermore, compared to near the permafrost table, humic acid materials in the permafrost layer decreased by 17%, while protein materials increased by 17%. These findings offer a novel perspective on the understanding of SOM stability in peatland soil profiles within discontinuous permafrost regions.

Miscanthus litter additions induce a successional change in the soil micro-food web with apparent decreases in soil nitrogen

The rapid loss of soil carbon (C) from cultivated peatland soils is leading to the use of high lignin, C-rich litter amendments as a potential solution to slow C losses. These chemically recalcitrant litter inputs are expected to cause microbial nitrogen (N) immobilization as a result of changes in the soil micro-food web, but whether bioavailable N is altered by litter as it is decomposed by the micro-food web remains unclear. We monitored changes in the soil nematode, fungal, and bacterial communities over time and across space (the rhizosphere and bulk soil) after field-applying different types of ligneous litter from miscanthus, ash, willow, or larch to a cultivated peatland soil. We found that miscanthus grass (C:N = 118) induced succession from fast-growing nematodes (cp-1) to slower-growing, cp-3 and cp-4 nematodes and this corresponded to reduced N availability. This lower soil N was likely due to relatively higher microbial biomass we observed with miscanthus, combined with a decrease in fast-growing bacterivores, limiting N mineralization from nematode grazing. We did not observe strong effects on the soil micro-food web or microbial biomass N for the other woody litters that had much higher C:N. This indicates that the changes in nematode community composition following ligneous litter inputs and subsequent impacts on soil N depend on litter type but are independent of litter C:N. Miscanthus amendments also corresponded to the lowest lettuce yield of all the amendments and thus caution is raised when using miscanthus straw as a widely-applied litter. Our results provide a useful reference to predict the effect of litter amendments on cultivated peatland soils through soil micro-food web dynamics, and bioavailable N for the crop.

Soil water repellency and its importance for the climate-smart sustainable management of fen peatland soils in Central Poland

The paper aims to assess potential soil water repellency (SWR) in the surface layers of long-term agricultural fen soils. Furthermore, we attempt to enhance our understanding of the links between selected soil properties (e.g., secondary transformation, total organic carbon (TOC) content) and SWR in differently used (grasslands and arable lands) fen soils in the temperate climate zone. The study was conducted in the Grójec Valley, Central Poland. The soil samples for laboratory analyses were collected in June 2022 from 64 sampling points – 56 grassland and 8 arable sites. We found that secondary soil transformation (mursh forming process) was significantly positively correlated with SWR – determined by MED (molarity of ethanol droplet) and WDPT (water drop penetration time) methods (r = 0.42 and r = 0.40, p < 0.05) only in the organic samples (i.e., mursh). The significant positive correlation between SWR and TOC content (r = 0.73 (MED) and r = 0.74 (WDPT), p < 0.05) indicates that, as well as organic matter depletion, there was a decrease in the water repellency of the studied soils. Our results indicate that study fen sites should be rewetted, and that the implementation of the paludiculture must take place in the near future. At a minimum, further arable cultivation of organic soils should be avoided, as they are the most vulnerable to secondary transformation and exhibit high SWR values. Furthermore, in the case of crop production on post-organic soils, it is recommended that the conservation tillage method is applied to prevent further depletion of soil organic matter content.

Low nitrous oxide fluxes from mineral affected peatland soils in Iceland

Nitrous oxide (N2O) is a potent greenhouse gas, and soil is one of its most substantial sources. Emissions are influenced by both biotic and abiotic processes, as well as the physiochemical properties of the medium. Organic soils fully drained in boreal climates are a potentially significant source of nitrous oxide. Lower, drainage levels and nutrient availability have been shown to reduce N2O emissions. Predicting N2O emissions from agriculturally managed peatlands is challenging. In situ measurements are crucial for addressing these difficulties. This study presents three years of in situ field measurements of nitrous oxide fluxes and soil hydrological status in peatland soils under different agricultural management regimes: cultivated drained (CD), uncultivated drained (UCD), and wet (W) in Western Iceland. Fluxes were quantified by analysing a time-concentration series obtained from permanent chambers and subsequently evaluated using gas chromatography in the laboratory. The minimum potential N2O consumption rate (mean ± 95 % Cl) was estimated as 0.76 ± 0.38, 0.56 ± 0.18 and 0.56 ± 0.14 mg N2O-N m⁻² day⁻¹ for CD, UCD, and W sites, respectively. Yearly accumulated emissions were estimated as 2.24 ± 1.47, 1.26 ± 0.64 and 0.26 ± 0.44 kg N2O-N ha−1 yr−1 for CD, UCD, and W sites, respectively. The relatively low emission rates observed at drained sites can be explained by the stable water content, and by limited availability of soil phosphorus, which hampers N2O production and potentially leads to more active N2O consumption. Both the stable water content and low phosphorus availability is explained by mineral inputs to the peatlands, acting through decreased soil unsaturated hydraulic conductivity and increased phosphorus retention. The effects of mineral content offer potential mitigation option to decrease N2O emissions. This study highlights the complexity of N2O emissions from peatland soils and emphasizes the significance of site-specific factors in managing greenhouse gas emissions. Further studies investigating the underlying processes behind N2O fluxes in the peatland and andic soils are recommended.

Aquatic processing enhances the loss of aged carbon from drained and burned peatlands.

Water-logged peatlands store tremendous amounts of soil carbon (C) globally, accumulating C over millennia. As peatlands become disturbed by human activity, these long-term C stores are getting destabilized and ultimately released as greenhouse gases that may exacerbate climate change. Oxidation of the dissolved organic carbon (DOC) mobilized from disturbed soils to streams and canals may be one avenue for the transfer of previously stored, millennia-aged C to the atmosphere. However, it remains unknown whether aged peat-derived DOC undergoes oxidation to carbon dioxide (CO2) following disturbance. Here, we use a new approach to measure the radiocarbon content of CO2 produced from the oxidation of DOC in canals overlying peatland soils that have undergone widespread disturbance in Indonesia. This work shows for the first time that aged DOC mobilized from drained and burned peatland soils is susceptible to oxidation by both microbial respiration and photomineralization over aquatic travel times for DOC. The bulk radiocarbon age of CO2 produced during canal oxidation ranged from modern to ~1300 years before present. These ages for CO2 were most strongly influenced by canal water depth, which was proportional to the water table level where DOC is mobilized from disturbed soils to canals. Canal microbes preferentially respired older or younger organic C pools to CO2, and this may have been facilitated by the use of a small particulate organic C pool over the dissolved pool. Given that high densities of canals are generally associated with lower water tables and higher fire risk, our findings suggest that peatland areas with high canal density may be a hotspot for the loss of aged C on the landscape. Taken together, the results of this study show how and why aquatic processing of organic C on the landscape can enhance the transfer of long-term peat C stores to the atmosphere following disturbance.

Borg extrachromosomal elements of methane-oxidizing archaea have conserved and expressed genetic repertoires

Borgs are huge extrachromosomal elements (ECE) of anaerobic methane-consuming “Candidatus Methanoperedens” archaea. Here, we used nanopore sequencing to validate published complete genomes curated from short reads and to reconstruct new genomes. 13 complete and four near-complete linear genomes share 40 genes that define a largely syntenous genome backbone. We use these conserved genes to identify new Borgs from peatland soil and to delineate Borg phylogeny, revealing two major clades. Remarkably, Borg genes encoding nanowire-like electron-transferring cytochromes and cell surface proteins are more highly expressed than those of host Methanoperedens, indicating that Borgs augment the Methanoperedens activity in situ. We reconstructed the first complete 4.00 Mbp genome for a Methanoperedens that is inferred to be a Borg host and predicted its methylation motifs, which differ from pervasive TC and CC methylation motifs of the Borgs. Thus, methylation may enable Methanoperedens to distinguish their genomes from those of Borgs. Very high Borg to Methanoperedens ratios and structural predictions suggest that Borgs may be capable of encapsulation. The findings clearly define Borgs as a distinct class of ECE with shared genomic signatures, establish their diversification from a common ancestor with genetic inheritance, and raise the possibility of periodic existence outside of host cells.

Quantifying Dissolved Organic Compound Efflux from Drained Peatlands in Hemiboreal Latvia

This study evaluated the impact of different land use types on groundwater dissolved organic carbon (DOC) concentrations and annual DOC efflux from drained peatlands to catchment runoff, providing insights into the mechanisms of carbon stock changes in peatland soils. We measured groundwater chemical properties and various environmental variables, and calculated daily runoff and evapotranspiration for 2021 to estimate monthly and annual DOC efflux and analyzed main affecting factors in different peatland land use types. The highest DOC concentrations in groundwater were found in Scots pine forests and active peat extraction sites, with values of 113.7 mg L−1 and 109.7 mg L−1, respectively, and the lowest in silver birch forests and croplands, at 51.9 mg L−1 and 18.6 mg L−1, respectively. There were statistically significant correlations, including a strong negative correlation between DOC concentrations and several groundwater chemical properties, such as pH, electrical conductivity (EC), Ca, Mg, and K concentrations. The concentrations of DOC in the groundwater of drained peatland showed significant variation between different land use types. The highest annual DOC efflux was observed in active peat extraction sites, at 513.1 kg ha−1 y−1, while the lowest was in grasslands, at 61.9 kg ha−1 y−1, where Ca and Mg concentrations, as well as EC, were the highest. Continuous monitoring of these concentration patterns is essential.

Dry and wet periods determine stem and soil greenhouse gas fluxes in a northern drained peatland forest

Greenhouse gas (GHG) fluxes from peatland soils are relatively well studied, whereas tree stem fluxes have received far less attention. Simultaneous year-long measurements of soil and tree stem GHG fluxes in northern peatland forests are scarce, as previous studies have primarily focused on the growing season. We determined the seasonal dynamics of tree stem and soil CH4, N2O and CO2 fluxes in a hemiboreal drained peatland forest. Gas samples for flux calculations were manually collected from chambers at different heights on Downy Birch (Betula pubescens) and Norway Spruce (Picea abies) trees (November 2020–December 2021) and analysed using gas chromatography. Environmental parameters were measured simultaneously with fluxes and xylem sap flow was recorded during the growing season. Birch stems played a greater role in the annual GHG dynamics than spruce stems. Birch stems were net annual CH4, N2O and CO2 sources, while spruce stems constituted a CH4 and CO2 source but a N2O sink. Soil was a net CO2 and N2O source, but a sink of CH4. Temporal dynamics of stem CH4 and N2O fluxes were driven by isolated emissions' peaks that contributed significantly to net annual fluxes. Stem CO2 efflux followed a seasonal trend coinciding with tree growth phenology. Stem CH4 dynamics were significantly affected by the changes between wetter and drier periods, while N2O was more influenced by short-term changes in soil hydrologic conditions. We showed that CH4 emitted from tree stems during the wetter period can offset nearly half of the soil sink capacity. We presented for the first time the relationship between tree stem GHG fluxes and sap flow in a peatland forest. The net CH4 flux was likely an aggregate of soil-derived and stem-produced CH4. A dominating soil source was more evident for stem N2O fluxes.

Iron additions accelerate carbon loss from drained soil but promote carbon accumulation in waterlogged soil of Zoige plateau peatland

Iron (Fe), the fourth abundant element in soil, commonly exists as ferrous (Fe(II)) and ferric (Fe(Ⅲ)) forms, playing a crucial role carbon cycling. However, the effect of Fe(II) and Fe(Ⅲ) on soil organic carbon (SOC) remains unclear, especially in carbon-rich peatland soils. Therefore, this study added Fe (Ⅱ) and Fe (Ⅲ) into the drained and waterlogged soils sampled from the Zoige plateau peatland to conduct a 95-day incubation experiment to reveal the role of Fe forms in driving carbon cycling. The dynamics of carbon compositions (phenolics, dissolved organic carbon (DOC), SOC, Fe-bound SOC (Fe–SOC)) and enzyme activity (phenol oxidase and β-glucosidase) were tested along with incubation time. Moreover, soil functional groups and bacteria were determined over the incubation period. The results demonstrated that Fe(II) and Fe(Ⅲ) addition in the drained soil decreased phenolics, DOC and SOC but increased Fe–SOC, soil organic functional groups (i.e., aromatic hydroxyl), and chemical bonds (i.e., C–O bonds); the reduced DOC and phenolics by the increased Fe(III)/Fe(II) ratio (extracted by 0.5 M HCl solution) was the primary reason for SOC loss. In waterlogged soil, Fe(II) and Fe(Ⅲ) addition increased carbon compositions and soil functional groups; the increased DOC and phenolics by the reduced pH was the possible reason for SOC accumulation. It can be known that the wide existence of Fe(II) and Fe(Ⅲ) in peatland may accelerate carbon loss from drained soil but prevent carbon loss from waterlogged soil and enhance SOC stability.

Moisture and temperature effects on the radiocarbon signature of respired carbon dioxide to assess stability of soil carbon in the Tibetan Plateau

Abstract. Microbial release of CO2 from soils to the atmosphere reflects how environmental conditions affect the stability of soil organic matter (SOM), especially in massive organic-rich ecosystems like the peatlands and grasslands of the Qinghai–Tibetan Plateau (QTP). Radiocarbon (14C) is an important tracer of the global carbon cycle and can be used to understand SOM dynamics through the estimation of time lags between carbon fixation and respiration, often assessed with metrics such as age and transit time. In this study, we incubated peatland and grassland soils at four temperature (5, 10, 15 and 20 °C) and two water-filled pore space (WFPS) levels (60 % and 95 %) and measured the 14C signature of bulk soil and heterotrophic respired CO2. We compared the relation between the Δ14C of the bulk soil and the Δ14CO2 of respired carbon as a function of temperature and WFPS for the two soils. To better interpret our results, we used a mathematical model to analyse how the calculated number of pools, decomposition rates of carbon (k), transfer (α) and partitioning (γ) coefficients affect the Δ14C bulk and Δ14CO2 relation, with their respective mean age and mean transit time. From our incubations, we found that 14C values in bulk and CO2 from peatland were significantly more depleted (old) than from grassland soil. Our results showed that changes in temperature did not affect the Δ14C values of heterotrophic respired CO2 in either soil. However, changes in WFPS had a small effect on the 14CO2 in grassland soils and a significant influence in peatland soils, where higher WFPS levels led to more depleted Δ14CO2. In our models, the correspondence between Δ14C, age and transit time highly depended on the internal dynamics of the soil (k, α, γ and number of pools) as well as on model structure. We observed large differences between slow and fast cycling systems, where low values of decomposition rates modified the Δ14C values in a non-linear pattern due to the incorporation of modern carbon (14C bomb) in the soil. We concluded that the stability of carbon in the peatland and grassland soils of the QTP depends strongly on the direction of change in moisture and how it affects the rates of SOM decomposition, while temperature regulates the number of fluxes. Current land cover modification (desiccation) in Zoigê peatlands and climate change occurring on the QTP might largely increase CO2 fluxes along with the release of old carbon to the atmosphere potentially shifting carbon sinks into sources.

Peatland warming influences the abundance and distribution of branched tetraether lipids: Implications for temperature reconstruction

Branched glycerol dialkyl glycerol tetraethers (brGDGTs) are bacterial membrane lipids whose distribution in peatland soils serves as an important proxy for past climate changes due to strong linear correlations with temperature in modern environments. However, commonly used brGDGT-based temperature models are characterized by high uncertainty (ca. 4 °C) and these calibrations can show implausible correlations when applied at an ecosystem level. This lack of accuracy is often attributed to our limited understanding of the exact mechanisms behind the relationship between brGDGTs and temperature and the potential effect of temperature-independent factors on brGDGT distribution. Here, we examine the abundance and distribution of brGDGTs in a boreal peatland after four years of in-situ warming (+0, +2.25, +4.5, +6.75 and +9 °C). We observed that with warming, concentrations of total brGDGTs increased. Furthermore, we determined a shift in brGDGT distribution in the surface aerobic layers of the acrotelm (0–30 cm depth), whereas no detectable change was observed at deeper anaerobic depths (>40 cm), possibly due to limited microbial activity. The response of brGDGTs to warming was also reflected by a strong increase in the methylation index of 5-methyl brGDGTs (MBT′5Me), classically used as a temperature proxy. Further, the relationship between the MBT′5Me index and soil temperature differed between 0–10, 10–20 and 20–30 cm depth, highlighting depth-specific response of brGDGTs to warming, which should be considered in paleoenvironmental and paleoecological studies. As the bacterial community composition was generally unaltered, the rapid changes in brGDGT distribution argue for a physiological adaptation of the microorganisms producing these lipids. Finally, soil temperature and water table depth were better predictors of brGDGT concentration and distribution, highlighting the potential for these drivers to impact brGDGT-based proxies. To summarize, our results provide insights on the response of brGDGT source microorganisms to soil warming and underscore brGDGTs as viable temperature proxies for better understanding of climatic perturbation in peatlands.

Precipitation fuels dissolved greenhouse gas (CO2, CH4, N2O) dynamics in a peatland-dominated headwater stream: results from a continuous monitoring setup

Stream ecosystems are actively involved in the biogeochemical cycling of carbon (C) and nitrogen (N) from terrestrial and aquatic sources. Streams hydrologically connected to peatland soils are suggested to receive significant quantities of particulate, dissolved, and gaseous C and N species, which directly enhance losses of greenhouse gases (GHGs), i.e., carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O), and fuel in-stream GHG production. However, riverine GHG concentrations and emissions are highly dynamic due to temporally and spatially variable hydrological, meteorological, and biogeochemical conditions. In this study, we present a complete GHG monitoring system in a peatland stream, which can continuously measure dissolved GHG concentrations and allows to infer gaseous fluxes between the stream and the atmosphere and discuss the results from March 31 to August 25 at variable hydrological conditions during a cool spring and warm summer period. Stream water was continuously pumped into a water-air equilibration chamber, with the equilibrated and actively dried gas phase being measured with two GHG analyzers for CO2 and N2O and CH4 based on Off-Axis Integrated Cavity Output Spectroscopy (OA-ICOS) and Non-Dispersive Infra-Red (NDIR) spectroscopy, respectively. GHG measurements were performed continuously with only shorter measurement interruptions, mostly following a regular maintenance program. The results showed strong dynamics of GHGs with hourly mean concentrations up to 9959.1, 1478.6, and 9.9 parts per million (ppm) and emissions up to 313.89, 1.17, and 0.40 mg C or N m−2h−1 for CO2, CH4, and N2O, respectively. Significantly higher GHG concentrations and emissions were observed shortly after intense precipitation events at increasing stream water levels, contributing 59% to the total GHG budget of 762.2 g m−2 CO2-equivalents (CO2-eq). The GHG data indicated a constantly strong terrestrial signal from peatland pore waters, with high concentrations of dissolved GHGs being flushed into the stream water after precipitation. During drier periods, CO2 and CH4 dynamics were strongly influenced by in-stream metabolism. Continuous and high-frequency GHG data are needed to assess short- and long-term dynamics in stream ecosystems and for improved source partitioning between in-situ and ex-situ production.

Long‐term soil organic carbon changes after cropland conversion to grazed grassland in Southern Sweden

AbstractThere is growing awareness of the potential value of agricultural land for climate change mitigation. In Sweden, cropland areas have decreased by approximately 30% over recent decades, creating opportunities for these former croplands to be managed for climate change mitigation by increasing soil organic carbon (SOC) stocks. One potential land‐use change is conversion of cropland to grazed grasslands, but the long‐term effect of such change in management is not well understood and likely varies with soil type and site‐specific conditions. Through sampling of mineral and peatland soils within a 75‐year chronosequence of land converted from crop production to grazed grassland, we assessed how time since conversion, catenary position, and soil depth affected SOC storage. The SOC stocks calculated at an equivalent soil or ash mass increased through time since conversion in mineral soils at all topographic positions, at a rate of ~0.65% year−1. Soils at low topographic positions gained the most carbon. Peat SOC stock gains after conversion were large, but only marginally significant and only when calculated at an equivalent ash mass. We conclude that the conversion of mineral soil to grazed grassland promotes SOC accumulation at our sites, but climate change mitigation potential would need to be evaluated through a full greenhouse gas balance.

Climate warming and elevated CO2 alter peatland soil carbon sources and stability

Peatlands are an important carbon (C) reservoir storing one-third of global soil organic carbon (SOC), but little is known about the fate of these C stocks under climate change. Here, we examine the impact of warming and elevated atmospheric CO2 concentration (eCO2) on the molecular composition of SOC to infer SOC sources (microbe-, plant- and fire-derived) and stability in a boreal peatland. We show that while warming alone decreased plant- and microbe-derived SOC due to enhanced decomposition, warming combined with eCO2 increased plant-derived SOC compounds. We further observed increasing root-derived inputs (suberin) and declining leaf/needle-derived inputs (cutin) into SOC under warming and eCO2. The decline in SOC compounds with warming and gains from new root-derived C under eCO2, suggest that warming and eCO2 may shift peatland C budget towards pools with faster turnover. Together, our results indicate that climate change may increase inputs and enhance decomposition of SOC potentially destabilising C storage in peatlands.

Hot spots and hot moments of greenhouse gas emissions in agricultural peatlands

AbstractDrained agricultural peatlands occupy only 1% of agricultural land but are estimated to be responsible for approximately one third of global cropland greenhouse gas emissions. However, recent studies show that greenhouse gases fluxes from agricultural peatlands can vary by orders of magnitude over time. The relationship between these hot moments (individual fluxes with disproportionate impact on annual budgets) of greenhouse gas emissions and individual chamber locations (i.e. hot spots with disproportionate observations of hot moments) is poorly understood, but may help elucidate patterns and drivers of high greenhouse gas emissions from agricultural peatland soils. We used continuous chamber-based flux measurements across three land uses (corn, alfalfa, and pasture) to quantify the spatiotemporal patterns of soil greenhouse gas emissions from temperate agricultural peatlands in the Sacramento-San Joaquin Delta of California. We found that the location of hot spots of emissions varied over time and were not consistent across annual timescales. Hot moments of nitrous oxide (N2O) and carbon dioxide (CO2) fluxes were more evenly distributed across space than methane (CH4). In the corn system, hot moments of CH4 flux were often isolated to a single location but locations were not consistent across years. Spatiotemporal variability in soil moisture, soil oxygen, and temperature helped explain patterns in N2O fluxes in the annual corn agroecosystem but were less informative for perennial alfalfa N2O fluxes or CH4 fluxes across ecosystems, potentially due to insufficient spatiotemporal resolution of the associated drivers. Overall, our results do not support the concept of persistent hot spots of soil CO2, CH4, and N2O emissions in these drained agricultural peatlands. Hot moments of high flux events generally varied in space and time and thus required high sample densities. Our results highlight the importance of constraining hot moments and their controls to better quantify ecosystem greenhouse gas budgets.

Microbial carbohydrate-active enzymes influence soil carbon by regulating the of plant- and fungal-derived biomass decomposition in plateau peat wetlands under differing water conditions.

Peatlands are important carbon sinks and water sources in terrestrial ecosystems. It is important to explore their microbial-driven water-carbon synergistic mechanisms to understand the driving mechanisms of carbon processes in peatlands. Based on macrogenomic sequencing techniques, located on the peatland of the eastern margin of the Tibetan Plateau with similar stand and different water conditions, we taken soil properties, microbiome abundance, CAZyme abundance and enzyme gene pathways as the object of study, investigated the characterization of soil microbial carbohydrate-active enzymes (CAZymes) under different water gradients in peatland. According to the results, these three phyla (Chloroflexi, Gemmatimonadetes, and Verrucomicrobia) differed significantly between water gradients. Under dried wetlands, the abundance of CAZymes involved in hemicellulose and glucan degradation increased by 3.0 × 10-5 and 3.0 × 10-6, respectively. In contrast, the abundance of CAZymes involved in chitin degradation decreased by 1.1 × 10-5 (p < 0.05). It highlights that regulating plant- and fungus-derived carbon metabolism processes by soil microorganisms in highland peatlands is a crucial mechanism for their response to water changes. Most plant-derived carbon fractions are regulated by soil enzymes (endo-beta 1,4-xylanase, alpha-L-arabinofuranosidase, and alpha-L-fucosidase) containing CAZymes functional genes. Additional findings in this enzyme gene pathway indicate that water changes that affect soil carbon fractions indirectly influence the three enzyme gene metabolic pathways related to plant carbon sources (the glycolysis/gluconeogenesis, other glycan degradation and amino sugar, and nucleotide sugar metabolism). Overall, this study highlights the significance of microbial CAZymes in highland peatland soil carbon processes and indicates that microbial conversion of plant and fungal biomass carbon is more sensitive to water changes.

Assessing N2O Emissions from Tropical Crop Cultivation in Mineral and Peatland Soils: A Review

&lt;p&gt;Nitrous oxide (N&lt;sub&gt;2&lt;/sub&gt;O) emissions from agricultural activities contribute significantly to global warming. Understanding the factors influencing N&lt;sub&gt;2&lt;/sub&gt;O emissions is crucial for developing effective mitigation strategies. This review assesses N&lt;sub&gt;2&lt;/sub&gt;O emissions from various crops cultivated in tropical mineral and peatland soils, providing insights into the impact of land use, fertilization practices and rainfall on N&lt;sub&gt;2&lt;/sub&gt;O fluxes. Field measurements of N&lt;sub&gt;2&lt;/sub&gt;O fluxes were conducted in agricultural fields growing corn, peanuts, and cassava in Bogor Regency, West Java Province, as well as in peatland areas with Acacia plantations and natural primary forests in Bengkalis Regency, Riau Province. The study assesses the total N&lt;sub&gt;2&lt;/sub&gt;O fluxes for each crop and land type, revealing significant variations in N&lt;sub&gt;2&lt;/sub&gt;O emissions among different crops and land uses. Peatland areas exhibit higher emissions compared to mineral soils, emphasizing the need for targeted mitigation measures in these ecosystems. The findings highlight the importance of considering the type and age of land use when evaluating N&lt;sub&gt;2&lt;/sub&gt;O emissions. Land management practices, such as fertilizer use and soil disturbance, emerge as critical factors affecting N&lt;sub&gt;2&lt;/sub&gt;O emissions. Improper fertilizer application and excessive soil disturbance can lead to increased N&lt;sub&gt;2&lt;/sub&gt;O emissions, underscoring the necessity for careful N fertilizer management and conservation tillage techniques.&lt;/p&gt;

Responses of soil microbes and enzymes to long-term warming incubation in different depths of permafrost peatland soil

Soil microbes and enzymes mediate soil carbon–climate feedback, and their responses to increasing temperature partly affect soil carbon stability subjected to the effects of climate change. We performed a 50-month incubation experiment to determine the effect of long-term warming on soil microbes and enzymes involved in carbon cycling along permafrost peatland profile (0–150 cm) and investigated their response to water flooding in the active soil layer. Soil bacteria, fungi, and most enzymes were observed to be sensitive to changes in temperature and water in the permafrost peatland. Bacterial and fungal abundance decreased in the active layer soil but increased in the deepest permafrost layer under warming. The highest decrease in the ratio of soil bacteria to fungi was observed in the deepest permafrost layer under warming. These results indicated that long-term warming promotes recalcitrant carbon loss in permafrost because fungi are more efficient in decomposing high-molecular-weight compounds. Soil microbial catabolic activity measured using Biolog Ecoplates indicated a greater degree of average well color development at 15 °C than at 5 °C. The highest levels of microbial catabolic activity, functional diversity, and carbon substrate utilization were found in the permafrost boundary layer (60–80 cm). Soil polyphenol oxidase that degrades recalcitrant carbon was more sensitive to increases in temperature than β-glucosidase, N-acetyl-β-glucosaminidase, and acid phosphatase, which degrade labile carbon. Increasing temperature and water flooding exerted a synergistic effect on the bacterial and fungal abundance and β-glucosidase, acid phosphatase, and RubisCO activity in the topsoil. Structural equation modeling analysis indicated that soil enzyme activity significantly correlated with ratio of soil bacteria to fungi and microbial catabolic activity. Our results provide valuable insights into the linkage response of soil microorganisms, enzymes to climate change and their feedback to permafrost carbon loss.