This study mainly focuses on the microstructure evolution of QP980 steel during resistance spot welding and its influence on the mechanical performance of resistance spot welds which is a critical influencing factor on the quality of body-in-white at the service condition. It is observed that the thermomechanically engineered microstructure of QP980 steel changes to form metastable phases such as martensite in the fusion zone and the heat affected zone due to rapid cooling induced by the thermal cycle of the welding. A finite element modeling of the welding process was used to predict the weldment heat distribution, thermal history and microstructure evolution in different welding zones. The modeled thermal history of the weldments shows that the peak temperature in the four-pulse resistance spot welding is delayed because of pulsed welding conditions and holding times between the welding pulses. This heat management approach in pulsed welding prevents void formation. The modeled thermal history and rapid heating, and cooling conditions are discussed here to predict the microstructure evolution and transformation in the fusion and reheated zones. The modeled results were helpful in the prediction of the microstructure at different weld zones. Then the strategic links between the microstructure and mechanical performance of the welded alloy are discussed thoroughly. The microhardness profile of the weld is discussed from a microstructural point of view to disclose the physical metallurgy of the welds. Softening phenomena were not observed in the sub-critical heat affected zone.