Natural biomaterials often show ordered nanowire structures (ONWS) which display unique structural color or superior mechanical performance. Meanwhile, plenty of modern nanodevices with ONWS have flourished with activities focused on both basic and applied research. Manipulating synthetic nanowire (NW) from a disordered state to a hierarchically ordered structure via various assembly strategies brings about intriguing and exotic chemical/physical properties. In the past decades, many methods have been developed to assemble NWs and fabricate organized architectures, such as Langmuir-Blodgett interfacial assembly, spin-coating assembly, fluid-flow-induced assembly, and ice-template assembly. Nevertheless, for practical applications, large-scale and high-efficiency assembly strategies toward precise controlled architectures are largely limited by the lack understanding of assembly mechanisms. Especially, the manipulation principles and driving forces behind the state-of-art assembly strategies are still unclear. Besides, the lesser research attention on dynamic kinetics also impedes the revelation of the NW self-assembly mechanism. With the emergence of advanced in situ techniques, such as synchrotron-based X-ray techniques and in situ transmission electron microscopy (TEM), the dynamic monitoring of NW behavior in many practical environments becomes possible. In addition, the alignment direction and the stacking manner of NW film are of significance to the final performance. There is a lack of connection between the properties of one-dimensional nanoscale building blocks and the functionalities of the macro-assembly structures. To this end, dynamic monitoring is highly desired, which enables the precision modulation of NW assembly structure, leading to the discovery or prediction of new structures, novel properties, and performance optimization.In this Account, we aim to uncover the underlying kinetics of NW assembly or local reaction and mass transportation processes, as well as to build a solid connection from individual NWs to NW assembly structures with enhanced properties and eventually to macroscopic materials application. We first review the recent progress in state-of-art NW assembly strategies for diverse aligned structures according to the manipulation principle and the driving forces. To systematically review the NW self-assembly strategies, we categorize these strategies into three states: NWs on the liquid interface via surface tension, NW assembly in liquid via solution-shearing flow field, and NW assembly at the solid interval via physical repulsive force. Then, we introduce the existing advanced characterization techniques, including synchrotron-based X-ray scattering and in situ TEM, to dynamically monitor the intermediate states of the NW assembly and transport processes. The comprehensive understanding of this thermodynamic and kinetic mechanism facilitates the rational design, large scale, and high-efficiency fabrication of NW assemblies, thus promoting their applications in tailored optical-electrical electronics, smart electrochromic devices, electrocatalysis, structural materials, and chiral photonic crystals.