ABSTRACTIn this paper, the applicability of the recently developed compact polarimetric decomposition and inversion algorithm to estimate soil moisture under low agricultural vegetation cover is investigated using simulated L-band compact polarimetric synthetic aperture radar (PolSAR) data. The surface scattering component is separated from the volume component of the vegetation through a model-based compact polarimetric decomposition (m-α) under the assumption of randomly orientated vegetation volume and reflection symmetry. The extracted surface scattering component is compared with two physics-based, low frequency surface scattering models such as extended Bragg (X-Bragg) and polarimetric two scale model (PTSM) in order to invert soil moisture for corresponding model- and data-derived surface scattering mechanism parameter αs. In addition to the parameter αs from m-α decomposition, the applicability of other scattering mechanism parameters, such as δ (relative phase) and χ (degree of circularity) from m-δ and m-χ decompositions are also investigated for their suitability to invert soil moisture. The algorithm is applied on a time series of simulated L-band compact polarimetric E-SAR data from the AgriSAR’2006 campaign over the Görmin test site in Northern Germany. The compact PolSAR-derived soil moisture is validated against in situ time-domain reflectometry (TDR) measurements. Including various growth stages of three different crop types, the estimated soil moisture values indicate an overall root mean square error (RMSE) of 9–12 and 9–15 vol.% using the X-Bragg model and the PTSM, respectively. The inversion rate for vegetation covered soils ranges from 5% to 40% including all phenological stages of the crops and different soil moisture conditions (range from 4 to 34 vol.%). The time series of soil moisture inversion results using compact polarimetry reveal that the developed algorithm is less sensitive to wet soils under growing agriculture crops due to less sensitivity of scattering mechanism parameters αs and χ for εs > 20. Thus, further developments and investigations are needed to invert soil moisture for compact PolSAR data with high inversion rates and consistently less RMSE (<5 vol.%) over the various crop growing season.