Labile Pool Research Articles

The labile zinc pool in plant cells.

Zinc is the most abundant and important transition metal in plants; however, the dynamic aspects of zinc homeostasis in plant cells are poorly understood. In this study we explored the pool of labile exchangeable zinc complexes in plant cells, and the potential influence of changes in intracellular zinc availability on cellular physiology. Work was performed on cultivated cell extracts of Arabidopsis thaliana (L.) Heynh. and Thellungiella salsuginea (Pall.) O.E. Schulz grown under control (3.48 µM Zn2+), 10-fold Zn excess or Zn starvation conditions. The free and labile Zn contents in the extracts were then determined by fluorimetric titration. We observed for the first time that plant cells contain micromolar concentrations of labile zinc complexes that account for a low percentage of the total zinc content. Labile zinc is mainly protein bound. Zn starvation inhibits cell proliferation and leads to the disappearance of the labile zinc pool, whereas Zn excess drastically increases the labile zinc pool. Free Zn2+ is buffered at picomolar concentrations in the intracellular milieu, and the increase in free Zn2+ concentrations to low nanomolar values clearly modulates enzyme activity by direct reversible binding. Such increases in free Zn2+ can be achieved by the substantial influx of additional zinc or by the oxidation of zinc-binding thiols. The observed features of the labile zinc pool in plant cells suggest it has a role in intracellular zinc trafficking and zinc signalling.

Soil Organic Fractions in Cultivated and Uncultivated Soils of Costal Area in Bangladesh

Assessment of soil organic matter fractions can be instrumental in understanding the causes of limited nitrogen supply, and thus soil fertility restoration. A study was conducted in cultivated and uncultivated saline soil, in order to assay soil organic carbon (SOC), its particle-size fractions and their influence on cultivation and soil fertility at Sundarbans costal area in Bangladesh. Soil samples were taken from the 0 - 15 and 15 - 30 cm depths from four cultivated fields and from four nearby sites in a native mangrove forest as references. Soil samples were physically fractionated into sand (2000-50 μm), silt (50-2 μm) and clay ( silt > sand. The SOC pool and N in the clay-sized fraction were correlated to soil fertility indicators. More N was stored in the silt + clay size fractions, a generally more stable pool, than in the more labile sand-sized pool. The SOC pool in sand size fractions was far below in cultivated soils than in a reference uncultivated soil. Thus, the sand-sized pool emerged as the most likely cause of limited N supply in cultivated soils.

Synergistic and Antagonistic Interactions of Calcium with Other Nutrients in Soil and Plants

Interaction between nutrients in crop plants occurs when the supply of one nutrient affects the absorption and utilization of other nutrients. Nutrient interactions may be positive (synergistic) or negative (antagonistic) and also possible to have no interactions. Interaction of calcium with other macro and micro nutrient hinders the nutrient availability to crop plants by forming different complexes and precipitates. Calcium is divalent ion which competes for the adsorption site of the soil and other labile pool nutrient gets affected. Increase in soil pH due to calcium carbonate content in soil which also restricts the micro nutrient availability.

Digital mapping of soil carbon fractions with machine learning

Our understanding of the spatial distribution of soil carbon (C) pools across diverse land uses, soils, and climatic gradients at regional scale is still limited. Research in digital soil mapping and modeling that investigates the interplay between (i) soil C pools and environmental factors (“deterministic trend model”) and (ii) stochastic, spatially dependent variations in soil C fractions (“stochastic model”) is just emerging. This evoked our motivation to investigate soil C pools in the State of Florida covering about 150,000 km2. Our specific objectives were to (i) compare different soil C pool models that quantify stochastic and/or deterministic components, (ii) assess the prediction performance of soil C models, and (iii) identify environmental factors that impart most control on labile and recalcitrant pools and soil total C (TC). We used soil data (0–20 cm) from a research collected at 1014 georeferenced sites including measured bulk density, recalcitrant carbon (RC), labile (hot-water extractable) carbon (HC) and TC. A comprehensive set of 327 geospatial soil-environmental variables was acquired. The Boruta method was employed to identify “all-relevant” soil-environmental predictors. We employed eight methods - Classification and Regression Tree (CaRT), Bagged Regression Tree (BaRT), Boosted Regression Tree (BoRT), Random Forest (RF), Support Vector Machine (SVM), Partial Least Square Regression (PLSR), Regression Kriging (RK), and Ordinary Kriging (OK) – to predict soil C fractions and TC. Overall, 36, 20 and 25 predictors stood out as “all-relevant” to estimate TC, RC and HC, respectively. We predicted a mean of 5.29 ± 3.58 kg TC m−2 in the top 20 cm with the best model. The prediction performance assessed by the Ratio of Prediction Error to Inter-quartile Range for TC stocks was as follows: RF > SVM > BoRT > BaRT > PLSR > RK > CART > OK. The best models explained 71.6%, 71.7% and 30.5% of the total variation for TC, RC and HC, respectively. Biotic and hydro-pedological factors explained most of the variation in soil C pools and TC; lithologic and climatic factors showed some relationships to soil C pools and TC, whereas topographic factors faded from soil C models.

Bovine eggs release zinc in response to parthenogenetic and sperm-induced egg activation

Upon fertilization or parthenogenesis, zinc is released into the extracellular space through a series of exocytic events termed zinc sparks, which are tightly coordinated with intracellular calcium transients. The zinc spark reduces the total amount of intracellular zinc, and this reduction is necessary and sufficient to induce egg activation even in the absence of calcium transients. In addition, this zinc release contributes to the block to polyspermy through modification of the zona pellucida. The zinc spark has been documented in all organisms examined to date including the mouse, two species of nonhuman primates, and human. Here we determined whether zinc sparks occur in the bovine, an important model of gamete development in mono-ovulatory mammalian species. We obtained metaphase II-arrested (MII) bovine eggs following in vitro maturation. Total zinc, assessed in single cells using X-Ray Fluorescence Microscopy, was significantly more abundant in the bovine egg compared to iron and copper. Studies with intracellular fluorescent probes revealed that labile zinc pools are localized to discrete cytoplasmic punctae enriched at the cortex. To determine whether zinc undergoes dynamic fluxes during egg activation, we parthenogenetically activated bovine eggs using two approaches: ionomycin or bovine phospholipase C zeta (bPlcζ). Both these methods induced zinc sparks coordinately with intracellular calcium transients. The zinc spark was also observed in bovine eggs following intracytoplasmic sperm injection. These results establish that zinc is the most abundant transition metal in the bovine egg, and zinc flux during egg activation - induced by chemical activation or sperm - is a highly conserved event across mammalian species.

Effects of fertiliser on phosphorus pools in soils with contrasting organic matter content: A fractionation and path analysis study

With the intensification of agricultural production in many European countries, more marginal soils with elevated organic matter (OM) content are being brought into cultivation. However, little is known about the transformations in the constituent phosphorus (P) pools of organic soils receiving applications of P fertiliser. Soil P fractions were measured before and after receiving fertiliser in a controlled experiment to determine the change in the soil pools and path analysis was used to evaluate the relationships between P pools. In this study, P deficient soils ranging in OM content from 8 to 76%, were placed in large pots, planted with ryegrass and subjected to P fertiliser applications ranging from 10 to 145 kg ha−1, and monitored over an eight-month study period. High OM soils had a diminished ability to build-up the labile pool from freshly applied P, with relatively low increases up to 200% of the initial value, compared to mineral soils in which the labile pool increased to >2500% of the initial concentration. Additionally, organic soils had higher P uptakes in the grass yield than mineral soils, indicating a higher availability of added P in the soil solution than mineral soils due to their limited sorption ability. In general, there was a reduction in the organic P pool over applications from 0 to 55 kg ha−1, which was indicative of partial mineralization, but was followed by an accumulation of added P over applications from 55 to 145 kg P ha−1. The residual P pools did not build-up with P additions, but data indicated the occurrence of mineralization in most of the soils with decreases of around 40% of the initial concentrations. Organic and residual pools therefore displayed potential to supply P to more labile P pools across all soils of this study. Path analysis indicated that applied P was the only source of labile P in the soil with the highest OM content, leaving it dependent on continuous P applications to supply P for productivity, whereas in the rest of the soils there were interrelations between the non-labile and labile pools. Low pH strongly immobilised the applied P and should be corrected before the initiation of any fertilisation program, even in soils deficient in plant available P. The results demonstrated that P added as fertiliser to organic soils does not accumulate as in mineral soils, which may leave them susceptible to P losses in surface runoff. Therefore, organic soils under agricultural production located in high status catchments should receive low P applications and only during periods with low probability of precipitation to minimise the possibility of P exports to receiving waters.

Spatial variability of organic matter properties determines methane fluxes in a tropical forested peatland.

Tropical peatland ecosystems are a significant component of the global carbon cycle and feature a range of distinct vegetation types, but the extent of links between contrasting plant species, peat biogeochemistry and greenhouse gas fluxes remains unclear. Here we assessed how vegetation affects small scale variation of tropical peatland carbon dynamics by quantifying in situ greenhouse gas emissions over 1 month using the closed chamber technique, and peat organic matter properties using Rock-Eval 6 pyrolysis within the rooting zones of canopy palms and broadleaved evergreen trees. Mean methane fluxes ranged from 0.56 to 1.2 mg m−2 h−1 and were significantly greater closer to plant stems. In addition, pH, ranging from 3.95 to 4.16, was significantly greater closer to stems. A three pool model of organic matter thermal stability (labile, intermediate and passive pools) indicated a large labile pool in surface peat (35–42%), with equivalent carbon stocks of 2236–3065 g m−2. Methane fluxes were driven by overall substrate availability rather than any specific carbon pool. No peat properties correlated with carbon dioxide fluxes, suggesting a significant role for root respiration, aerobic decomposition and/or methane oxidation. These results demonstrate how vegetation type and inputs, and peat organic matter properties are important determinants of small scale spatial variation of methane fluxes in tropical peatlands that are affected by climate and land use change.

Effect of a novel Ca-Si composite mineral on Cd bioavailability, transport and accumulation in paddy soil-rice system

Ubiquitous cadmium (Cd) contamination in mine impacted paddy soil has been jeopardizing regional rice quality, which represents a dominant pathway of Cd exposure in populations depending on a rice diet. Two major aspects of mitigation, soil liming and Si fertilization, were integrated and investigated with a Ca-Si-rich composite mineral (CS) derived from feldspar and carbonate. With the CS amendment, bioavailable Cd in rice rhizosphere was reduced by 92–100% from tillering to maturation stage, paralleled by a marked increase in Cd bound to Fe/Mn oxides and carbonate. As indicated by XRD analysis, the much reduced labile pool of Cd in the CS-amended soil could be mainly attributed to Cd (co)precipitation (Cd(OH)2, Cd2(OH)3Cl, CH6Br3CdN) and surface complexation on more negatively charged oxides at elevated soil pH with CS addition. EDX line scan illustrated much more intensified Si deposition along root cross-section in the CS treatment, which resulted in 1.5–2.1-fold higher Cd sequestration in the CS-amended root than control. As a direct result, the root-to-shoots Cd translocation was reduced significantly by 42–51%, while a slightly less significant decrease in brown rice Cd was obtained with the CS treatment relative to control. The CS amendment showed differing effects on brown rice mineral accumulation, with 1.2–1.5-fold increase in brown rice Zn and simultaneously reduced Fe, Mn, Mg and Cu in brown rice. Our results call the readers' attention to the potential impact of soil ameliorator on grain mineral uptake, and we suggest that proper fortification with mineral fertilizers should be supplemented to assist sustainable rice production with improved mineral nutrition.

Carbon and Nitrogen Pools in Deep Soil Horizons at Different Landscape Positions

Core Ideas Total C and total N were greater at shoulder position for alfalfa than in the other two land uses. No observed differences for total C among land uses at backslope and footslope positions. Labile pools of C and N showed differences with land use and topographic positions. In general, labile C and N pools followed alfalfa > black walnut plantation > corn–soybean. Labile and bulk pools of carbon and nitrogen (C and N) play different functional roles in soil organic matter dynamics and nutrient cycling. The objectives of this study were to evaluate the (i) effects of land use [corn (Zea mays L.)–soybean [Glycine max (L.) Merr.], alfalfa (Medicago sativa L.), and black walnut (Juglans nigra L.) plantation] and (ii) vertical distribution of labile [potassium permanganate oxidizable carbon (POXC), water extractable organic carbon (WEOC), water extractable nitrogen (WEN)] and bulk [total carbon (TC), total nitrogen (TN)] pools of C and N in soil to a depth of 105 cm at different topographic positions within a watershed. Alfalfa had 10.02 to 14.86 Mg ha−1 greater TC than corn–soybean and black walnut plantation on the shoulder position in the surface horizon (0–15 cm), whereas the subsurface horizon (15–105 cm) showed no significant differences for TC measured at all topographic positions. Soil POXC was significantly higher in alfalfa than corn–soybean in the surface layer of 0 to 15 cm by 1748.6, 1904.03, and 2878.67 kg ha−1 at the shoulder, backslope, and footslope positions, respectively. However, no differences were observed for POXC at the shoulder position when all subsurface layers were combined at 15‐ to 105‐cm depth. In general, the labile pools of C and N showed differences with land use and topographic positions and followed alfalfa > black walnut plantation > corn–soybean. The study results suggest that for accurate assessment of land use on C and N gains and/or losses both bulk and labile pools should be measured including the entire root zone depth. Topographic differences should be accounted for assessing C and N pools at the watershed scale.

CHANGES IN C : N : Р RATIOS IN PLANT BIOMASS, SOIL AND SOIL MICROBIAL BIOMASS DUE TO THE WARMING AND DESSICATION EFFECT OF FLARING

Climate warming results in significant changes in the structure and functioning of terrestrial ecosystems. The ecosystems situated near oil-well gas flares may be used as model ones for studying warming effect on soil and vegetation. By contrast to regular manipulation experiments where ecopysiological factors are modified or controlled artificially, we used anthropogenically affected condi-tions caused by the gas flaring. Our research was aimed to assess the warming and desiccation effect on the stoichiometric ratios of the principle nutrients (C : N : P) in pine phytomass, soil and soil microbial biomass. Soil organic matter (SOM) and dying microbial biomass were found to be exposed to the increased rate of mineralization under conditions of the abiotic stress. In addition, the de-crease of relative С content in sustainable SOM pools occured along with the increase of C content in the most labile water-soluble pools. Accelerated SOM mineralization decreasing C : N with respect to phosphorus ratio in soil and soil microbial biomass was sufficiently intensified by the decrease in C : N : P in pine needles. Thus, studying changes in stoichiometric ratios of biophylic ele-ments as affected by abiotic factors seems to be prospective and promising methodological approach for predicting terrestrial ecosystem transformations under global climate changes.

In situ measurements of micronutrient dynamics in open seawater show that complex dissociation rates may limit diatom growth

In this first in situ study of the dynamic availability of phytoplankton micronutrients, a SeaExplorer glider was combined with Diffusive Gradients in Thin Films and deployed in the Mediterranean Sea. On the basis of their labile metal complex pools, we discovered that Fe and Co can be potentially limiting and Cu co-limiting to diatom growth, contrary to the generally accepted view that phosphorus (phosphate) is the growth limiting element in the Mediterranean Sea. For flagellates and picoplankton, phosphorus remains the main element limiting growth. Our in situ measurements showed that organic complexes of Fe and Cu (>98% of total dissolved concentration), dissociate slower than inorganic complexes of Co, Cd and Ni (>99% of total dissolved concentration being free ions and inorganic complexes). This strengthens the potential growth limiting effect of Fe and Cu versus phosphate, which is present as a free ion and, thus, directly available for plankton.

Labile and stable pools of organic matter in soil amended with sewage sludge biochar

ABSTRACTOne of the main advantages of using biochar for agricultural purposes is its ability to store carbon (C) in soil for a long-term. Studies of labile and stable fractions of soil organic matter (SOM) may be a good indicator of the dynamics of biochar in soils. This study evaluated the effects of applying sewage sludge biochar (SSB) in combination with mineral fertilizer on fractions of SOM. To conduct this evaluation, 15 Mg ha−1 of SSB combined or not with mineral fertilizer (NPK) was applied to the soil in two cropping seasons. Apart from total organic C (TOC), the labile and stable fractions of SOM were also determined. The combined use of SSB and NPK resulted in higher TOC, a 22% to 40% increase compared to the control and to the NPK treatments, respectively. The SSB produced at a lower temperature increased the labile fractions of SOM, especially the microbial biomass C, showing its capacity to supply nutrients in the short-term. The stable pools of SOM are increased after adding SSB produced at a higher temperature. It was concluded that pyrolysis temperature is a key-factor that determines the potential of SSB to accumulate C in labile and stable fractions of SOM.

Mobility of Ni, Co, and Mn in ultramafic mining soils of New Caledonia, assessed by kinetic EDTA extractions.

The aim of this study was to determine the mobilization capability of Ni, Co, and Mn contained in New Caledonian ultramafic soils. Two series of soils were sampled: bare-surface mining soils in a Ni-mining context (n = 10), and forest soils, either in the vicinity of mine-working areas (n = 3) or far away from any known mining activity (n = 2). We focused on the < 100μm soil fraction, because of its sensitivity to wind erosion, and its possible dissemination toward urbanized areas. In order to assess maximum potential metal mobility, EDTA kinetic extractions were performed over 24h. Extraction curves were modeled as the sum of two first-order reactions. The first EDTA extracted pool corresponds to "quickly" released metals, while the second pool corresponds to "slowly" released metals. The remaining fraction is the EDTA non-extractable pool. Extractable Ni, Co, and Mn were always low in relation to total concentrations (< 5% for Ni, and 5-35% for Co and Mn). The extraction rate of the less labile pool was significantly higher for forest soils than for mining soils, whatever the metal. Despite the greater extractability potential in forest surface soils, mining soils represent a bigger environmental risk, because of their high metal content and, above all, because of their predisposition to surface runoff and eolian deflation.

Equilibrating stable Cd isotopes with acidic soils

ABSTRACT Cadmium (Cd) in the soil solution is in dynamic equilibrium with the reservoir of bioavailable Cd attached to the solid phase, i.e. the labile pool (CdE). Traditionally, CdE is estimated using the radioisotope 109Cd, which has severely restricted access to estimates of CdE. Using stable isotope dilution and isotope ratio measurement by inductive coupled plasma-quadrupole mass spectroscopy (ICP-QMS) would increase access to estimates of CdE; however, detail remains scant about the optimal conditions for equilibration and measurement. We report optimal conditions for spiking with 110Cd, batch equilibration and ICP-QMS measurement of the ratio of 110Cd to 111Cd using results for six acidic soils with total Cd concentrations of 0.19–6.4 mg Cd kg−1, suspended in three background electrolytes (10 mM CaCl2, 1 M NH4NO3, and 1 M NH4Cl). Our optimised procedure produces robust estimates of CdE. Application of this approach will greatly increase access to estimates of CdE and to the investigation of its role in Cd uptake by plants.

A new ferrous diflunisal complex and its effects on biopools of labile iron

Drugs bearing metal-coordinating moieties can alter biological metal distribution. In this work, a complex between iron(II) and diflunisal was prepared in the solid state, exhibiting the following composition: [Fe(diflunisal)2(H2O)2], (Fe(dif)2). The ability of diflunisal to alter labile pools of both plasmatic and cellular iron was investigated in this work. We found out that diflunisal does not increase the levels of redox-active iron in plasma of iron overloaded patients. However, diflunisal efficiently carries iron into HeLa or HepG2 cells, inducing an iron-catalyzed oxidative stress.

Desert leaf litter decay: Coupling of microbial respiration, water-soluble fractions and photodegradation.

The mechanisms of plant litter decay in drylands are poorly understood, limiting the accuracy of nutrient-cycling models for these systems. We monitored the decay of 12 leaf litter types on the soil surface of the Sonoran Desert for 34months and assessed what traits predicted mass loss and how exposure to different wavebands of sunlight influenced mass loss. Mass loss varied considerably among litter types, ranging from 42%-96% after 34months in full sunlight. Traditional indices of litter quality (e.g., initial C:N or lignin:N ratios) failed to predict differences in mass loss among litter types. The strongest predictor of mass loss was the microbial respiration rate of initial litter, which explained 45%-54% of the variation in loss among litter types. Microbial respiration rates were not correlated with traditional indices of litter quality, but were positively correlated with the water-soluble fraction in litter and concentrations of dissolved organic C in this fraction. Traditional indices of litter quality failed to predict decay likely because they did a poor job of predicting microbial degradability of litter, not because microbial degradation was a minor driver of decay. In all radiation-exposure treatments, water-soluble fractions and respiration rates increased through decay and were several times higher after 34months than initially. Hence, labile pools and microbial degradability of litter increased through decay in contrast to traditional views that labile pools decline and constrain microbes. Litter exposed to UV or UV through blue radiation wavelengths, lost on average 1.3 times or 1.5 times more mass, respectively, than litter not exposed to these wavebands. The magnitude of this photodegradation was greater in litter types that had higher initial concentrations of hemicellulose and cellulose per unit surface area. Litter exposed to full sun had higher water-soluble fractions and usually had higher respiration rates, illustrating that sunlight accelerated microbial degradation by increasing labile pools. The processes driving litter decay appeared to differ appreciably from mesic systems and involved strong couplings between abiotic and biotic drivers.

Significance of manganese fertilization in wheat-based cropping systems of Indo-Gangetic Plain (IGP)

Manganese (Mn) is an essential micronutrient, having critical role in plant nutrition. The Mn is component of several enzymes involved in photosynthesis and other physiological processes. The intensive cultivation of rice-wheat (RW) followed since long times, along with induction of rice in non-rice growing areas, especially in north-western Indo Gangetic Plain (NW-IGP) had led to emergence of Mn deficiency, particularly in wheat crops in RW rotation. Higher leaching losses of soil Mn under submerged rice induces Mn deficiency in the subsequent wheat crops. This paper critically assesses the literature on role of Mn on crop growth, distribution of soil Mn and its dynamics, effect of different soil characteristics on soil Mn availability under different cropping systems prevalent in IGP. Soil ionic composition, moisture status, organic matter status, soil pH, cation exchange capacity are some of the soil parameters dictating Mn dynamics in soil. Higher availability of soil Mn was reported under acidic condition, which decreasedwith increase in soil pH. Literature suggests positive effects of nitrate and phosphates on soil Mn dynamics and crop yields, whereas bicarbonate and chloride application have negative effects. Plant available Mn or DTPA-Mn varied under different cropping systems showing lower availability under RW system. Fractionation studies showed that labile pools of Mn contribute very less towards total soil Mn, leaving large proportion of soil Mn non-labile in nature, thus unavailable for plant uptake. The release of Mn from soil adsorption sites varied under different cropping systems, modifying Mn supply capacity of soil. Maximum release of Mn was found under frequently irrigated sugarcanesugarcanecropping system. Such information are essentially required for developing efficient Mn fertilization scheduling to improve the yield and quality of crops in IGPs.

Responses of Labile Organic Nitrogen Fractions and Enzyme Activities in eroded Mollisols After 8-year Manure Amendment

Soil erosion will cause a degradation in soil nitrogen supplying capacity (SNSC) and manure amendment is an effective way to restored eroded soils. Both labile fractions of soil organic N (SON) and N transformation enzymes are indicators for SNSC, but the effect of manure amendments on labile SON fractions and the relationship between labile SON fractions and enzyme activities remains unclear. In this study, five degrees of erosion were simulated in Mollisols (removal of 0, 5, 10, 20 and 30 cm of topsoil) to analyse the changes in labile SON fractions and nitrogen transformation enzyme activities after 8-year manure amendment. We found that soil total N (TN), labile SON fractions and enzyme activities all increased after manure amendments. The largest labile SON fraction was particle organic nitrogen (POM-N) and the second was light fraction organic nitrogen (LFOM-N), which accounted >60% for TN in total. Correlation analysis showed that both urease and protease activities were significantly correlated with POM-N, LFOM-N, microbial biomass N and dissolvable organic N, indicating that both urease and protease activities can be used to predict labile SON pools and enzyme activities worked similarly in indicating SNSC with labile SON fractions. Altogether, 8-year manure amendment could recover SNSC of lightly eroded Mollisols to natural levels, i.e. erosion depths at 5 cm and 10 cm; however, it is not able to recover SNSC in Mollisols suffering severe erosion.

Glyceraldehyde-3-phosphate dehydrogenase is a chaperone that allocates labile heme in cells

Cellular heme is thought to be distributed between a pool of sequestered heme that is tightly bound within hemeproteins and a labile heme pool required for signaling and transfer into proteins. A heme chaperone that can hold and allocate labile heme within cells has long been proposed but never been identified. Here, we show that the glycolytic protein glyceraldehyde-3-phosphate dehydrogenase (GAPDH) fulfills this role by acting as an essential repository and allocator of bioavailable heme to downstream protein targets. We identified a conserved histidine in GAPDH that is needed for its robust heme binding both in vitro and in mammalian cells. Substitution of this histidine, and the consequent decreases in GAPDH heme binding, antagonized heme delivery to both cytosolic and nuclear hemeprotein targets, including inducible nitric-oxide synthase (iNOS) in murine macrophages and the nuclear transcription factor Hap1 in yeast, even though this GAPDH variant caused cellular levels of labile heme to rise dramatically. We conclude that by virtue of its heme-binding property, GAPDH binds and chaperones labile heme to create a heme pool that is bioavailable to downstream proteins. Our finding solves a fundamental question in cell biology and provides a new foundation for exploring heme homeostasis in health and disease.

The Effect of Atmospheric Acid Processing on the Global Deposition of Bioavailable Phosphorus From Dust

AbstractThe role of dust as a source of bioavailable phosphorus (Bio‐P) is quantified using a new parameterization for apatite dissolution in combination with global soil data maps and a global aerosol transport model. Mineral dust provides 31.2 Gg‐P/year of Bio‐P to the oceans, with 14.3 Gg‐P/year from labile P present in the dust, and an additional 16.9 Gg‐P/year from acid dissolution of apatite in the atmosphere, representing an increase of 120%. The North Atlantic, northwest Pacific, and Mediterranean Sea are identified as important sites of Bio‐P deposition from mineral dust. The acid dissolution process increases the fraction of total‐P that is bioavailable from ~10% globally from the labile pool to 18% in the Atlantic Ocean, 42% in the Pacific Ocean, and 20% in the Indian Ocean, with an ocean global mean value of 22%. Strong seasonal variations, especially in the North Pacific, northwest Atlantic, and Indian Ocean, are driven by large‐scale meteorology and pollution sources from industrial and biomass‐burning regions. Globally constant values of total‐P content and bioavailable fraction used previously do not capture the simulated variability. We find particular sensitivity to the representation of particle‐to‐particle variability of apatite, which supplies Bio‐P through acid‐dissolution, and calcium carbonate, which helps to buffer the dissolution process. A modest 10% external mixing results in an increase of Bio‐P deposition by 18%. The total Bio‐P calculated here (31.2 Gg‐P/year) represents a minimum compared to previous estimates due to the relatively low total‐P in the global soil map used.