Simple SummaryMorphological and ecological features are highly specialized among subterranean insect species. Studies of such features reveal the vast diversity of insect taxa and can also provide insight into the general mechanisms associated with species diversity. The Pterostichus macrogenys species group is an endemic subterranean Japanese carabid beetle lineage that shows marked regional differentiation. However, to date, its diversity has not been fully elucidated, partly due to the difficulty of sample collection. We examined 103 specimens from this species group, which were collected by fine-scale field sampling, and classified these into one new and eight known species. The results of this study revealed that some of these species have disjunct distributions, which have not been reported in this species group. More importantly, some species of this group coexisted in some localities; in most such cases, two species with different body sizes coexisted, implying a role of differential body size in promoting coexistence. In the remaining case, one large and two small species coexisted, and the two small species have male genitalia of different sizes; in this system, body and genital size differences appear to have different effects on coexistence, implying a species coexistence mechanism that has rarely been reported in insects.An endemic subterranean Japanese carabid beetle lineage, the Pterostichus macrogenys species group, was recently revealed to have marked regional differentiation. Studies of such features reveal insect species diversity and provide insight into the mechanisms driving species diversity. We examined specimens of this species group collected from the southern Tohoku District of Honshu, Japan, where its diversity has not yet been fully elucidated, using fine-scale field sampling and detailed comparative morphological analysis of male genitalia. In total, 103 specimens from 13 localities were classified into one new (P. monolineatus sp. n.) and eight known species. In four of the known species, we observed disjunct distributions, which have not previously been reported in this species group and may be more common than previously recognized. Species coexistence was observed at four sites, with two species of different body sizes coexisting at three sites and three species coexisting at the remaining site. The three coexisting species included one large and two small species, the latter of which have male genitalia of a different size. This newly discovered coexistence pattern implies separate effects of differential body and genital size in species coexistence, which has rarely been reported in insects.