Handball is a sport with a high risk of injury, The prevalence of injury is only obtainable through a thorough and comprehensive analysis. One of the most commonly used test batteries for interpreting the characteristics of an injury is the Functional Movement Screen (FMSTM). It makes possible to possible to identify movement limitations and asymmetries which are believed to impact injury risk in sports. The aim of this study is to use the FMSTM to determine whether an eight-week training protocol can predict and prevent injuries in handball. The study sample comprised the fifteen members of the Borac handball club youth team. The initial measurement showed that most players (80%) had an overall score in the test battery ranging from 15 to 20 points. In addition, three players were found to have asymmetry. Only one of the three players had an overall score in the FMSTM of ≤14. The participants scored the lowest in the initial measurement for Rotary Stability, followed by Deep Squat and Hurdle Step Left. They scored the highest in the Shoulder Mobility. After the implementation of the exercise protocol for improving body mobility and stability, the final measurements showed that all the participants had an overall score in the FMSTM of >14. The value of eta squared showed that training in between the two measurements had a significant impact. At the time of testing and protocol implementation no players sustained any injuries during matches or in training. This study confirmed that the FMSTM can be used to predict injuries in sports.