Inhibition Of Plant Pathogens Research Articles

A Bjerkandera adust new strain as a potential biocontrol agent against wheat scab.

Bjerkandera adusta can decompose polycyclic aromatic hydrocarbons including cellulose and lignin, but its roles in inhibiting plant pathogens are unclear. Here, the confrontation culture and greenhouse pot experiments were employed to study the control effect of B. adusta M1 on Fusarium graminearum and wheat scab. The results showed that B. adusta M1 fermentation broth (FB) inhibited the growth of F. graminearum, with an inhibition rate of 52.7-89.17%. FB had a significant control effect (72.14 ± 1.42%) on wheat scab, which was slightly lower than that of the chemical fungicide carbendazim (77.34 ± 1.76%). The growth rate was significantly higher in B. adusta M1 than in F. graminearum, indicating a strong competitiveness by B. adusta M1. The images from a scanning electron microscope showed substantial deformations of the hyphae of F. graminearum being penetrated by the hyphae of B. adusta M1, indicating a strong mycoparasitism by B. adusta M1. In addition, FB increased the activity of catalase, peroxidase, and phenylalanine ammonia-lyase in wheat leaves related to disease resistance and decreased the malondialdehyde production and cell membrane permeability. We conclude that B. adusta M1 is a promising fungal agent to control the detriment of F. graminearum to cereal growth in the field.

Bio-based composite granules with simultaneous biocontrol and phosphorus fertilization roles: Outcomes from a lab-scale in vitro assessment.

The use of phosphate rocks as low-solubility phosphorus fertilizers has been promoted to reduce the environmental impacts of agriculture, but adequate nutrient uptake by plants depends on solubilization of the rock, driven by soil microorganisms. Here, investigation was made of the microbial solubilization of low-solubility phosphate rocks, together with simultaneous bioprotective action involving the biocontrol of microorganisms. The aim was to enhance function and value by delivering two effects using a single bio-based product, in accordance with the concept of a "bioreactor-in-a-granule" system. A composite structure was developed, based on a starch matrix, comprising a combination of Trichoderma asperelloides, as a biocontrol agent, and Aspergillus niger, as an acidulant. A significant increase of up to 150% in P solubilization was achieved, indicating the positive effect of the microorganism-composite interaction. In vitro assays showed that the ability of T. asperelloides to inhibit Fusarium oxysporum mycelial growth was maintained in the presence of A. niger. Moreover, the estimated cost of the composite granule (0.35 US$/kg of product on a dry basis) revealed competitive. The results indicated that the association of T. asperelloides and A. niger is an effective way to increase nutrient availability and to inhibit plant pathogens, opening up possibilities for the design of multifunctional bio-based fertilizer composites.

Investigating the Responses of Microbial Communities to Banana Fusarium Wilt in Suppressive and Conducive Soils Based on Soil Particle-Size Differentiation

The microbiota plays a primary role in inhibiting plant pathogens in the soils. However, the correlation between soil particles and local microbial communities has not been fully confirmed. In this study, we contrasted the different assemblages of microbial communities between suppressive and conducive soils via the differentiation of soil particle-size fractions (PSFs). We further extracted the direct and indirect interactive associations among the soil biotic and abiotic factors by using samples from two continuous banana cropping systems. Notable differences were shown in PSF composition, biological traits (microbial communities and enzyme patterns) and physiochemical parameters between suppressive and conducive soils among the different soil fractions. For example, compared with conducive soils, suppressive soils have higher nutrient contents, fungal abundance and diversity and enzyme activities, and the extent of these differences was explored for fractions of different sizes. Moreover, the microbial taxonomic composition strongly varied between disease-suppressive and disease-conducive soils. For instance, there were significant differences in the relative abundance among key microbiology communities, such as Actinobacteria, Firmicutes, Bacteroidetes, Proteobacteria and Ascomycota, especially for antagonistic microorganisms (i.e., Streptomyces, Pseudomonas, Trichoderma, etc.) across various soil fractions. In addition, structural equation modeling (SEM) showed that the complex associations among soil PSFs, physiochemical parameters and microbial communities were mediated by multiple pathways, which then drive the soil enzyme activities and may further influence the suppressiveness of the soil. These results demonstrate that the resident microbial communities in specific soil particles may play a crucial role in the development of soil suppressiveness against banana Fusarium wilt disease.

Mode of Attack of Microbiological Control Agents against Plant Pathogens for Sustainable Agriculture and Food Security

Plant diseases accounts for huge losses in agriculture. To ensure food security and sustainability, an agricultural yield must be improved to meet the growing world population. Due to growing awareness of the effect of pesticides and herbicides on human health and the environment, an alternative safe method of controlling phytopathogens has become a subject of intense research. Biological control of plant diseases is the use of living organisms to suppress or inhibit plant pathogens. Microbiological control agents (MBCAs) employ microorganisms to protect crops from destruction by phytopathogens through different modes of action. They may act by direct interaction with the pathogens through hyperparasitism. Indirect antagonistic interaction with the pathogen through induction of host resistance and priming is another mode of attack by MBCAs. Competition for nutrients and space is another important indirect mode of attack by which MBCAs suppress the growth of pathogens through nutrient deprivation. The MBCAs can also interact with the plant through secretion of antibiotics or antimicrobial secondary metabolites with inhibitory effect against the pathogens. A clear understanding of the mode of action of MBCAs is vital to achieving a successful biocontrol operation as well as improving the biocontrol process that is devoid of risks to humans and the environment. Such improvement could be achieved through the use of microbial consortia to enhance the stability and efficiency of the biocontrol process. Further studies on aspects of mass production and formulation to produce more effective, stable, safer and cost effective MBCAs are needed.

Aureobasidium pullulans S-2 reduced the disease incidence of tomato by influencing the postharvest microbiome during storage

Biological control of postharvest fruit diseases by antagonistic microorganisms is considered an effective alternative to chemical fungicides. The influence of microbial antagonists on the fruit-associated microbiome provides a new perspective for the in-depth study of the antagonistic mechanism. In this study, the biocontrol effect of A. pullulans S-2 against postharvest diseases of tomatoes was investigated. At the same time, the fungal and bacterial microbiota on tomato surfaces were investigated by high-throughput sequencing. The results showed that A. pullulans S-2 could inhibit the decay incidence, maintain fruit firmness and reduce weight loss of tomato. In addition, the treatment group could maintain higher titratable acidity, ascorbic acid and lycopene content than the control group. More dramatic changes in fungal diversity than in bacterial diversity were observed in the microbiota after the application of A. pullulans S-2. Aureobasidium was significantly enriched in the treatment group, while Cladosporium, Mycosphaerella, Alternaria and Penicillium decreased compared to the control group. Pantoea, Brevibacterium, Brachybacterium, Serratia, Glutamicibacter and Pseudomonas also showed significant differences between the two groups. This study shows that the application of A. pullulans S-2 leads to changes in the bacterial and fungal community that can inhibit plant pathogens and reduce the incidence of fruit diseases. It provides new insights into the dynamics of the surface microbiome of tomato after treatment with microbial antagonists.

Effect of Plant Systemic Resistance Elicited by Biological and Chemical Inducers on the Colonization of the Lettuce and Basil Leaf Apoplast by Salmonella enterica.

Mitigation strategies to prevent microbial contamination of crops are lacking. We tested the hypothesis that induction of plant systemic resistance by biological (induced systemic resistance [ISR]) and chemical (systemic acquired resistance [SAR]) elicitors reduces endophytic colonization of leaves by Salmonella enterica serovars Senftenberg and Typhimurium. S. Senftenberg had greater endophytic fitness than S. Typhimurium in basil and lettuce. The apoplastic population sizes of serovars Senftenberg and Typhimurium in basil and lettuce, respectively, were significantly reduced approximately 10- to 100-fold by root treatment with microbial inducers of systemic resistance compared to H2O treatment. Rhodotorula glutinis effected the lowest population increases of S. Typhimurium in lettuce and S. Senftenberg in basil leaves, respectively 120- and 60-fold lower than those seen with the H2O treatment over 10 days postinoculation. Trichoderma harzianum and Pichia guilliermondii did not have any significant effect on S. Senftenberg in the basil apoplast. The chemical elicitors acidobenzolar-S-methyl and dl-β-amino-butyric acid inhibited S. Typhimurium multiplication in the lettuce apoplast 10- and 2-fold, respectively, compared to H2O-treated plants. All ISR and SAR inducers applied to lettuce roots in this study increased leaf expression of the defense gene PR1, as did Salmonella apoplastic colonization in H2O-treated lettuce plants. Remarkably, both acidobenzolar-S-methyl upregulation and R. glutinis upregulation of PR1 were repressed by the presence of Salmonella in the leaves. However, enhanced PR1 expression was sustained longer and at greater levels upon elicitor treatment than by Salmonella induction alone. These results serve as a proof of concept that priming of plant immunity may provide an intrinsic hurdle against the endophytic establishment of enteric pathogens in leafy vegetables. IMPORTANCE Fruit and vegetables consumed raw have become an important vehicle of foodborne illness despite a continuous effort to improve their microbial safety. Salmonella enterica has caused numerous recalls and outbreaks of infection associated with contaminated leafy vegetables. Evidence is increasing that enteric pathogens can reach the leaf apoplast, where they confront plant innate immunity. Plants may be triggered for induction of their defense signaling pathways by exposure to chemical or microbial elicitors. This priming for recognition of microbes by plant defense pathways has been used to inhibit plant pathogens and limit disease. Given that current mitigation strategies are insufficient in preventing microbial contamination of produce and associated outbreaks, we investigated the effect of plant-induced resistance on S. enterica colonization of the lettuce and basil leaf apoplast in order to gain a proof of concept for the use of such an intrinsic approach to inhibit human pathogens in leafy vegetables.

Burkholderia perseverans sp. nov., a bacterium isolated from the Restinga ecosystem, is a producer of volatile and diffusible compounds that inhibit plant pathogens.

Gram-negative, aerobic, rod-shaped, non-spore-forming, motile bacteria, designated CBAS 719T, CBAS 732 and CBAS 720 were isolated from leaf litter samples, collected in Espírito Santo State, Brazil, in 2008. Sequences of the 16S rRNA, gyrB, lepA and recA genes showed that these strains grouped with Burkholderia plantarii LMG 9035T, Burkholderia gladioli LMG 2216T and Burkholderia glumae LMG 2196T in a clade of phytopathogenic Burkholderia species. Digital DNA-DNA hybridization experiments and ANI analyses demonstrated that strain CBAS 719T represents a novel species in this lineage that is very closely related with B. plantarii. The genome sequence of the type strain is 7.57 Mbp and its G + C content is 69.01mol%. The absence of growth on TSA medium supplemented with 3% (w/v) NaCl, citrate assimilation, β-galactosidase (PNPG) activity, and of lipase C14 activity differentiated strain CBAS 719T from B. plantarii LMG 9035T, its nearest phylogenetic neighbor. Its predominant fatty acid components were C16:0, C18:1 ω7c, cyclo-C17:0 and summed feature 3 (C16:1 ω7c and/or C15:0 iso 2-OH). Based on these genotypic and phenotypic characteristics, the strains CBAS 719T, CBAS 732 and CBAS 720 are classified in a novel Burkholderia species, for which the name Burkholderia perseverans sp. nov. is proposed. The type strain is CBAS 719T (= LMG 31557T = INN12T).

Bioformulations with Beneficial Microbial Consortia, a Bioactive Compound and Plant Biopolymers Modulate Sweet Basil Productivity, Photosynthetic Activity and Metabolites.

Increasing attention is being given to the development of innovative formulations to substitute the use of synthetic chemicals to improve agricultural production and resource use efficiency. Alternatives can include biological products containing beneficial microorganisms and bioactive metabolites able to inhibit plant pathogens, induce systemic resistance and promote plant growth. The efficacy of such bioformulations can be increased by the addition of polymers as adjuvants or carriers. Trichoderma afroharzianum T22, Azotobacter chroococcum 76A and 6-pentyl-α-pyrone (6PP; a Trichoderma secondary metabolite) were administrated singularly or in a consortium, with or without a carboxymethyl cellulose-based biopolymer (BP), and tested on sweet basil (Ocimum basilicum L.) grown in a protected greenhouse. The effect of the treatments on basil yield, photosynthetic activity and secondary metabolites production was assessed. Photosynthetic efficiency was augmented by the applications of the bioformulations. The applications to the rhizosphere with BP + 6PP and BP + T22 + 76A increased the total fresh weight of basil by 26.3% and 23.6%, respectively. Untargeted LC-MS qTOF analysis demonstrated that the plant metabolome was significantly modified by the treatments. Quantification of the profiles for the major phenolic acids indicated that the treatment with the T22 + 76A consortium increased rosmarinic acid content by 110%. The use of innovative bioformulations containing microbes, their metabolites and a biopolymer was found to modulate the cultivation of fresh basil by improving yield and quality, thus providing the opportunity to develop farming systems with minimal impact on the environmental footprint from the agricultural production process.

Potential of Bacillus velezensis as a probiotic in animal feed: a review.

Bacillus velezensis is a plant growth-promoting bacterium that can also inhibit plant pathogens. However, based on its properties, it is emerging as a probiotic in animal feed. This review focuses on the potential characteristics of B. velezensis for use as a probiotic in the animal feed industry. The review was conducted by collecting recently published articles from peer-reviewed journals. Google Scholar and PubMed were used as search engines to access published literature. Based on the information obtained, the data were divided into three groups to discuss the (i) probiotic characteristics of B. velezensis, (ii) probiotic potential for fish, and (iii) the future potential of this species to be developed as a probiotic for the animal feed industry. Different strains of B. velezensis isolated from different sources were found to have the ability to produce antimicrobial compounds and have a beneficial effect on the gut microbiota, with the potential to be a candidate probiotic in the animal feed industry. This review provides valuable information about the characteristics of B. velezensis, which can provide researchers with a better understanding of the use of this species in the animal feed industry.

Antagonistic Activity of Siderophore-Producing Bacteria from Black Rice Rhizosphere against Rice Blast Fungus Pyricularia oryzae

Rice blast caused by Pyricularia oryzae, which is a major threat to food security worldwide, markedly decreases the yield of rice. Some rhizobacteria called 'plant growth-promoting rhizobacteria' inhibit plant pathogens and improve plant growth by secreting iron-chelating siderophores. The decreased availability of iron adversely affects the survival of pathogens, especially fungal pathogens, in the rhizosphere. This study aimed to determine the morphological diversity of siderophore-producing bacteria, analyze the type of siderophores produced by the bacteria, and examine their growth-inhibitory activity against Pyricularia oryzae. The rhizobacteria were isolated from the rhizosphere of Sembada Hitam variety of black rice plants in Pakem, Sleman, Yogyakarta, Indonesia. In total, 12 distinct isolates were screened for the production of siderophores. It was found that 9 out of 12 bacteria produced siderophore and most of them were Gram positive bacteria. The best siderophore-producing isolates with different type of siderophore were used in further studies. The IS3 and IS14 isolates were found to be the best siderophore producer that produced hydroxamate and mixed type of hydroxamate-carboxylate type of siderophore, respectively. In the dual culture assay, IS14 showed a strong antagonistic effect against Pyricularia oryzae by the 81.17% inhibition.

Inhibitory Effect of Osthole from Cnidium monnieri (L.) Cusson on Fusarium oxysporum, a Common Fungal Pathogen of Potato.

Fusarium wilt of potato is one of the most common diseases of potato in China, and is becoming a serious threat in potato production. It has been reported that osthole from Cnidium monnieri (L.) Cusson can inhibit plant pathogens. Here, we test the anti-fungal activity of C. monnieri osthole against Fusarium oxysporum in potatoes. The results showed that at a concentration of 5 mg/mL, osthole was able to obviously inhibit mycelial growth of F. oxysporum. We found that osthole caused changes of mycelial morphology, notably hyphal swelling and darkening. Osthole significantly reduced the spore germination of Fusarium by 57.40%. In addition, osthole also inhibited the growth of other pathogens such as Fusarium moniliforme J. Sheld, Thanatephorus cucumeris Donk, and Alternaria alternata (Fr.) Keissl, but not Alternaria solani Jonesetgrout and Valsa mali Miyabe and G. Yamada. Our results suggest that osthole has considerable potential as an agent for the prevention and treatment of potato Fusarium wilt.

Trichoderma Strains – Antagonists of Plant Pathogenic Micromycetes

Species of the genus Trichoderma are known as the producers of many biologically active substances, in particular, enzymes that have found their practical application in many industries. In addition, the active Trichoderma strains are used as biological control agents of plant pathogenic micromycetes. Trichoderma strains are able to exhibit antagonistic properties against plant pathogens very effectively due to their peculiarities: high growth rate; synthesis of chitinolytic enzymes and secondary metabolites with antifungal activity. Thus, highly active Trichoderma strains has been successfully used to control plant pathogenic isolates of Fusarium, Alternaria, Botrytis, Sclerotinia, Verticillium, Pythium and other genera. The aim of the study was to evaluate the antagonistic activity of 100 Trichoderma strains against eight test-cultures of plant pathogenic micromycetes of different species and to select the most active strains for further studies of their physiological properties. Methods. Cultures of the studied fungi were grown on potato-dextrose agar. The antagonistic activity of fungi of the genus Trichoderma against fungal plant pathogens was carried out using the conventional method of dual culture. The percentages of growth inhibition of plant pathogens were calculated, and on the basis of these values the antagonistic activity of strains were concluded. Microsoft Excel and Origin 8.0 (OriginLab) packages were used for statistical data processing. Results. According to the results of a study of the antagonistic activity of Trichoderma strains against plant pathogenic micromycetes in general, it was shown that the strains have a high level of antifungal activity. Thus, the most numerous group (38%) of the total studied Trichoderma strains were “highly active” ones that inhibited the growth of plant pathogens from 70 to 80%. The second largest group (27%) was “moderately active” strains with 60–70% inhibition of plant pathogenic test cultures. The smallest (6%) but the most active group consisted of the “most active” strains with an average value of the inhibition more than 80%. Thus, almost three quarters (71%) of the studied Trichoderma strains showed a high level of antagonistic activity against plant pathogens with the inhibition more than 60%. In addition, only 17% of Trichoderma strains were “inactive” and 12% of them showed insufficient activity with growth inhibition of plant pathogens less than 50%. Notably, 35% of Trichoderma strains were active against all eight test cultures of plant pathogenic micromycetes. Conclusions. The studied Trichoderma strains have significant antagonistic potential both for individual strains of plant pathogenic micromycetes and for all studied plant pathogens. The involvement of a wide range of test cultures of plant pathogens, as well as significant amount (100) of Trichoderma strains allowed a more objective and systematic assessment of the antagonistic potential of fungi of this genus. Thus, our study of action of the wide range of Trichoderma strains against test cultures of different species showed that the fungi of the genus Trichoderma were effective antagonists of plant pathogenic fungi. The 38% of Trichoderma strains showed a high level of antifungal action and inhibited the growth of plant pathogens by 70% and more. Only 12% of strains showed less than 50% activity. In addition, 35% of Trichoderma strains were active against all eight tested plant pathogen test cultures. The significant amount of studied Trichoderma strains was highly active, and they can be used as a basis for further research to obtain effective biological control agents of plant pathogenic micromycetes.

Potential of Algae-Bacteria Synergistic Effects on Vegetable Production.

Modern agriculture has become heavily dependent on chemical fertilizers, which have caused environmental pollution and the loss of soil fertility and sustainability. Microalgae and plant growth-promoting bacteria (PGPB) have been identified as alternatives to chemical fertilizers for improving soil fertility. This is because of their biofertilizing properties, through the production of bioactive compounds (e.g., phytohormones, amino acids, and carotenoids) and their ability to inhibit plant pathogens. Although treatment based on a single species of microalgae or bacteria is commonly used in agriculture, there is growing experimental evidence suggesting that a symbiotic relationship between microalgae and bacteria synergistically affects each other’s physiological and metabolomic processes. Moreover, the co-culture/combination treatment of microalgae and bacteria is considered a promising approach in biotechnology for wastewater treatment and efficient biomass production, based on the advantage of the resulting synergistic effects. However, much remains unexplored regarding the microalgal–bacterial interactions for agricultural applications. In this review, we summarize the effects of microalgae and PGPB as biofertilizing agents on vegetable cultivation. Furthermore, we present the potential of the microalgae–PGPB co-culture/combination system for the environmentally compatible production of vegetables with improved quality.

Plant-produced bacteriocins inhibit plant pathogens and confer disease resistance in tomato

Bacteriocins are a diverse group of bacterial antimicrobial peptides (AMPs) that represent potential replacements for current antibiotics due to their novel modes of action. At present, production costs are a key constraint to the use of bacteriocins and other AMPs. Here, we report the production of bacteriocins in planta – a potentially scalable and cost-effective approach for AMP production. Nine bacteriocin genes with three different modes of action and minimal or no post-translational modifications were synthesized, cloned and used to transform Arabidopsis thaliana. To confirm bacteriocin functionality and the potential to use these plants as biofactories, Arabidopsis T3 crude leaf extracts were subjected to inhibition assays against the bacterial pathogens Clavibacter michiganensis subsp. michiganensis (Cmm) and Pseudomonas syringae pv. tomato DC3000 (Pst). Six and seven of nine extracts significantly inhibited Cmm and Pst, respectively. Three bacteriocin genes (plantaricin, enteriocin, and leucocin) were then selected for over-expression in tomato (Solanum lycopersicum). In vitro plant pathogen inhibition assays of T0, T1 and T2 transgenic tomato leaf extracts confirmed antimicrobial activity against both pathogens for all three generations of plants, indicating their potential use as stable biopesticide biofactories. Plantaricin and leucocin-expressing T2 tomato plants were resistant to Cmm, and leucocin-expressing T2 plants were resistant to Pst. This study highlights that plants can be used as biofactories for AMP production and that the expression of bacteriocins in planta may offer new opportunities for disease control in agriculture.

Synthesis of silver nanoparticles (AgNPs) by Fusarium concolor and inhibition of plant pathogens

ABSTRACT O uso de nanopartículas (NPs) na agricultura, representa uma importante inovação tecnológica, utilizada na produção de nanofertilizantes, nanocidas ou pesticidas encapsulados em nanopartículas para liberação controlada. As NPs de prata são reconhecidas por suas aplicações na agricultura, biotecnologia, medicina. Este trabalho teve como objetivo estudar a síntese de nanopartículas de prata por Fusarium concolor endofíticos obtidos de folhas e sementes de guaranazeiro e avaliar a atividade antifúngica das nanopartículas de prata no controle in vitro dos fitopatógenos Colletotrichum guaranicola, Colletotrichum spp. e Corynespora cassiicola. Quatro isolados de Fusarium concolor endofíticos foram utilizados para a produção de nanopartículas de prata. A caracterização das NPs foi realizada por espectroscopia de UV-Vis e microscopia eletrônica de varredura (MEV). Foram avaliados crescimento mycelial dos fitopatógenos na presença das AgNPs in vitro e foi observado evidenciando atividade antifúngica principalmente contra o fitopatógeno Colletotrichum guaranicola, sugerindo a possibilidade de utilização de nanopartículas de prata biossintetizadas manejo de fitopatógenos como uma alternativa no controle de doenças.

Screening of Marine Bioactive Antimicrobial Compounds for Plant Pathogens.

Plant diseases have been threatening food production. Controlling plant pathogens has become an important strategy to ensure food security. Although chemical control is an effective disease control strategy, its application is limited by many problems, such as environmental impact and pathogen resistance. In order to overcome these problems, it is necessary to develop more chemical reagents with new functional mechanisms. Due to their special living environment, marine organisms have produced a variety of bioactive compounds with novel structures, which have the potential to develop new fungicides. In the past two decades, screening marine bioactive compounds to inhibit plant pathogens has been a hot topic. In this review, we summarize the screening methods of marine active substances from plant pathogens, the identification of marine active substances from different sources, and the structure and antibacterial mechanism of marine active natural products. Finally, the application prospect of marine bioactive substances in plant disease control was prospected.

Plant Growth Promoting Rhizobacteria as Biological Control Agent in Rice

The use of agrochemical products to combat diseases in crops has adverse effects on the environment and human health. Plant growth promoting rhizobacterium (PGPR) has been increasingly proposed as an eco-friendly alternative in agriculture. PGPRs have beneficial effects not only in promoting plant growth but also have shown their potential as biological control agent, being able to inhibit plant pathogens. Here, we investigated the use of PGPR Paraburkholderia sp. strain SOS3 to provide disease protection in rice (Oryza sativa L.). The antagonistic activity of SOS3 against five fungal pathogens of rice was assessed by dual culture on plates and on rice seedlings. The results showed that on plate assay, SOS3 inhibits the growth of Curvularia lunata, Rhizoctonia solani, Pyricularia oryzae, Helminthosporium oryzae, and Fusarium moniliforme by 17.2%, 1.1%, 8.3%, 32.5%, and 35.4%, respectively. When inoculated on rice seeds, SOS3 promotes seed germination and significantly reduces disease symptoms in plants infected with R. solani. These results suggest that SOS3 has a great potential to be used in rice agriculture to combat the “Sheath Blight” disease.

Soybean Nodule-Associated Non-Rhizobial Bacteria Inhibit Plant Pathogens and Induce Growth Promotion in Tomato.

The root nodules are a unique environment formed on legume roots through a highly specific symbiotic relationship between leguminous plants and nodule-inducing bacteria. Previously, Rhizobia were presumed to be the only group of bacteria residing within nodules. However, recent studies discovered diverse groups of bacteria within the legume nodules. In this report soybean nodule-associated bacteria were studied in an effort to identify beneficial bacteria for plant disease control and growth promotion. Analysis of surface-sterilized single nodules showed bacterial diversity of the nodule microbiome. Five hundred non-rhizobial colonies from 10 nodules, 50 colonies per nodule, were tested individually against the tomato wilt causing bacterial pathogen Clavibacter michiganensis subsp. michiganensis (Cmm) for inhibition of pathogen growth. From the initial screening, 54 isolates were selected based on significant growth inhibition of Cmm. These isolates were further tested in vitro on another bacterial pathogen Pseudomonas syringae pv. tomato (Pst) and two fungal pathogens Rhizoctonia solani and Sclerotinia sclerotiorum. Bacterial metabolites were extracted from 15 selected isolates with ethanol and tested against pathogen Cmm and Pst. These isolates were identified by using MALDI-TOF mass spectrometry and 16S rRNA gene sequencing. Pseudomonas spp. were the dominant soybean nodule-associated non-rhizobial bacterial group. Several isolates imparted significant protection against pathogens and/or plant growth promotion on tomato seedlings. The most promising nodule-associated bacterial isolate that suppressed both Cmm and Pst in vitro and Pst in tomato seedlings was identified as a Proteus species. Isolation and identification of beneficial nodule-associated bacteria established the foundation for further exploration of potential nodule-associated bacteria for plant protection and growth promotion.

Harnessing microbial volatiles to replace pesticides and fertilizers.

Global agricultural systems are under increasing pressure to deliver sufficient, healthy food for a growing population. Seasonal inputs, including synthetic pesticides and fertilizers, are applied to crops to reduce losses by pathogens, and enhance crop biomass, although their production and application can also incur several economic and environmental penalties. New solutions are therefore urgently required to enhance crop yield whilst reducing dependence on these seasonal inputs. Volatile Organic Compounds (VOCs) produced by soil microorganisms may provide alternative, sustainable solutions, due to their ability to inhibit plant pathogens, induce plant resistance against pathogens and enhance plant growth promotion. This review will highlight recent advances in our understanding of the biological activities of microbial VOCs (mVOCs), providing perspectives on research required to develop them into viable alternatives to current unsustainable seasonal inputs. This can identify potential new avenues for mVOC research and stimulate discussion across the academic community and agri-business sector.

Genome Sequencing of Pantoea agglomerans C1 Provides Insights into Molecular and Genetic Mechanisms of Plant Growth-Promotion and Tolerance to Heavy Metals.

Distinctive strains of Pantoea are used as soil inoculants for their ability to promote plant growth. Pantoea agglomerans strain C1, previously isolated from the phyllosphere of lettuce, can produce indole-3-acetic acid (IAA), solubilize phosphate, and inhibit plant pathogens, such as Erwinia amylovora. In this paper, the complete genome sequence of strain C1 is reported. In addition, experimental evidence is provided on how the strain tolerates arsenate As (V) up to 100 mM, and on how secreted metabolites like IAA and siderophores act as biostimulants in tomato cuttings. The strain has a circular chromosome and two prophages for a total genome of 4,846,925-bp, with a DNA G+C content of 55.2%. Genes related to plant growth promotion and biocontrol activity, such as those associated with IAA and spermidine synthesis, solubilization of inorganic phosphate, acquisition of ferrous iron, and production of volatile organic compounds, siderophores and GABA, were found in the genome of strain C1. Genome analysis also provided better understanding of the mechanisms underlying strain resistance to multiple toxic heavy metals and transmission of these genes by horizontal gene transfer. Findings suggested that strain C1 exhibits high biotechnological potential as plant growth-promoting bacterium in heavy metal polluted soils.