Individual Cellulose Research Articles

Individual cotton cellulose nanofibers: pretreatment and fibrillation technique

We report a method to fibrillate raw dried cotton fibers into individual cellulose nanofibers (CNFs) by chemical purification (removal of non-cellulosic components) and pretreatment by a high-speed blender (breaking down the fiber structures) combined with high-pressure homogenization (nanofibrillation). The resultant CNFs were found to have a width of approximately 10–30 nm and high aspect ratios. The high light transmittance of the CNF/acrylic resin composite indicated that our treatment successfully disintegrated the raw cotton fibers into uniform CNFs. The cotton CNFs were found to have the advantages of high crystallinity and thermal stability.

Multiscale deconstruction of molecular architecture in corn stover.

Lignocellulosic composite in corn stover is a candidate biofuel feedstock of substantial abundance and sustainability. Its utilization is hampered by resistance of constituent cellulose fibrils to deconstruction. Here we use multi-scale studies of pretreated corn stover to elucidate the molecular mechanism of deconstruction and investigate the basis of recalcitrance. Dilute acid pretreatment has modest impact on fibrillar bundles at 0.1 micron length scales while leading to significant disorientation of individual fibrils. It disintegrates many fibrils into monomeric cellulose chains or small side-by-side aggregates. Residual crystalline fibrils lose amorphous surface material, change twist and where still cross-linked, coil around one another. Yields from enzymatic digestion are largely due to hydrolysis of individual cellulose chains and fragments generated during pretreatments. Fibrils that remain intact after pretreatment display substantial resistance to enzymatic digestion. Optimization of yield will require strategies that maximize generation of fragments and minimize preservation of intact cellulosic fibrils.

Cel48A from Thermobifida fusca: Structure and site directed mutagenesis of key residues

Lignocellulosic biomass is a potential source of sustainable transportation fuels, but efficient enzymatic saccharification of cellulose is a key challenge in its utilization. Cellulases from the glycoside hydrolase (GH) family 48 constitute an important component of bacterial biomass degrading systems and structures of three enzymes from this family have been previously published. We report a new crystal structure of TfCel48A, a reducing end directed exocellulase from Thermobifida fusca, which shows that this enzyme shares important structural features with the other members of the GH48 family. The active site tunnel entrance of the known GH48 exocellulases is enriched in aromatic residues, which are known to interact well with anhydroglucose units of cellulose. We carried out site-directed mutagenesis studies of these aromatic residues (Y97, F195, Y213, and W313) along with two non-aromatic residues (N212 and S311) also located around the tunnel entrance and a W315 residue inside the active site tunnel. Only the aromatic residues located around the tunnel entrance appear to be important for the ability of TfCel48A to access individual cellulose chains on bacterial cellulose (BC), a crystalline substrate. Both Trp residues were found to be important for the processivity of TfCel48A on BC and phosphoric acid swollen cellulose (PASC), but only W313 appears to play a role in the ability of the enzyme to access individual cellulose chains in BC. When acting on BC, reduced processivity was found to correlate with reduced enzyme activity. The reverse, however, is true when PASC is the substrate. Presumably, higher density of available cellulose chain ends and the amorphous nature of PASC explain the increased initial activity of mutants with lower processivity.

Increased enzyme binding to substrate is not necessary for more efficient cellulose hydrolysis

Substrate binding is typically one of the rate-limiting steps preceding enzyme catalytic action during homogeneous reactions. However, interfacial-based enzyme catalysis on insoluble crystalline substrates, like cellulose, has additional bottlenecks of individual biopolymer chain decrystallization from the substrate interface followed by its processive depolymerization to soluble sugars. This additional decrystallization step has ramifications on the role of enzyme-substrate binding and its relationship to overall catalytic efficiency. We found that altering the crystalline structure of cellulose from its native allomorph I(β) to III(I) results in 40-50% lower binding partition coefficient for fungal cellulases, but surprisingly, it enhanced hydrolytic activity on the latter allomorph. We developed a comprehensive kinetic model for processive cellulases acting on insoluble substrates to explain this anomalous finding. Our model predicts that a reduction in the effective binding affinity to the substrate coupled with an increase in the decrystallization procession rate of individual cellulose chains from the substrate surface into the enzyme active site can reproduce our anomalous experimental findings.

Crystal Structure and Computational Characterization of the Lytic Polysaccharide Monooxygenase GH61D from the Basidiomycota Fungus Phanerochaete chrysosporium

Carbohydrate structures are modified and degraded in the biosphere by a myriad of mostly hydrolytic enzymes. Recently, lytic polysaccharide mono-oxygenases (LPMOs) were discovered as a new class of enzymes for cleavage of recalcitrant polysaccharides that instead employ an oxidative mechanism. LPMOs employ copper as the catalytic metal and are dependent on oxygen and reducing agents for activity. LPMOs are found in many fungi and bacteria, but to date no basidiomycete LPMO has been structurally characterized. Here we present the three-dimensional crystal structure of the basidiomycete Phanerochaete chrysosporium GH61D LPMO, and, for the first time, measure the product distribution of LPMO action on a lignocellulosic substrate. The structure reveals a copper-bound active site common to LPMOs, a collection of aromatic and polar residues near the binding surface that may be responsible for regio-selectivity, and substantial differences in loop structures near the binding face compared with other LPMO structures. The activity assays indicate that this LPMO primarily produces aldonic acids. Last, molecular simulations reveal conformational changes, including the binding of several regions to the cellulose surface, leading to alignment of three tyrosine residues on the binding face of the enzyme with individual cellulose chains, similar to what has been observed for family 1 carbohydrate-binding modules. A calculated potential energy surface for surface translation indicates that P. chrysosporium GH61D exhibits energy wells whose spacing seems adapted to the spacing of cellobiose units along a cellulose chain.

Small-angle scattering study of structural changes in the microfibril network of nanocellulose during enzymatic hydrolysis

The hydrolysis of nanofibrillated cellulose (NFC), consisting of individual cellulose fibrils, was followed using small-angle scattering techniques in order to reveal changes in the substrate structure caused by cellulose degrading enzymes. In particular, the nanoscale structure of the network of cellulose fibrils was characterized with the combination of small-angle neutron scattering and small-angle x-ray scattering. In the nanocellulose with higher xylan content, the interfibrillar distance was shown to remain unchanged during enzymatic degradation, whereas the distance increased in the nanocellulose with lower xylan content. The limiting effect of xylan on the hydrolysis and a faster hydrolysis of the more thoroughly fibrillated segments of the NFC network could be observed. Despite the extensive fibrillation of the raw material, however, the hydrolysis was eventually limited by the aggregated and heterogeneous structure of the substrate.

Crystalline cellulose elastic modulus predicted by atomistic models of uniform deformation and nanoscale indentation

The elastic modulus of cellulose Iβ in the axial and transverse directions was obtained from atomistic simulations using both the standard uniform deformation approach and a complementary approach based on nanoscale indentation. This allowed comparisons between the methods and closer connectivity to experimental measurement techniques. A reactive force field was used that explicitly describes hydrogen bond, coulombic and van der Waals interactions, allowing each contribution to the inter- and intra-molecular forces to be analyzed as a function of crystallographic direction. The uniform deformation studies showed that the forces dominating elastic behavior differed in the axial and transverse directions because of the relationship between the direction of the applied strain and the hydrogen bonding planes. Simulations of nanoscale indentation were then introduced to model the interaction between a hemispherical indenter with the \((1\bar{1}0)\) surface of a cellulose Iβ rod. The role of indenter size, loading force and indentation speed on the transverse elastic modulus was studied and, for optimized parameters, the results found to be in good agreement with experimentally-measured transverse elastic modulus for individual cellulose crystals.

Novel Method for Controlled Wetting of Materials in the Environmental Scanning Electron Microscope

Environmental scanning electron microscopy has been extensively used for studying the wetting properties of different materials. For some types of investigation, however, the traditional ways of conducting in situ dynamic wetting experiments do not offer sufficient control over the wetting process. Here, we present a novel method for controlled wetting of materials in the environmental scanning electron microscope (ESEM). It offers improved control of the point of interaction between the water and the specimen and renders it more accessible for imaging. It also enables the study of water transport through a material by direct imaging. The method is based on the use of a piezo-driven nanomanipulator to bring a specimen in contact with a water reservoir in the ESEM chamber. The water reservoir is established by local condensation on a Peltier-cooled surface. A fixture was designed to make the experimental setup compatible with the standard Peltier cooling stage of the microscope. The developed technique was successfully applied to individual cellulose fibers, and the absorption and transport of water by individual cellulose fibers were imaged.

Role of mesoporosity in cellulose fibers for paper-based fast electrochemical energy storage

Paper, a low-cost and flexible substrate made from cellulose fiber, is explored in this study as a platform for fast electrochemical energy storage devices. Conductivity and Li-storage capabilities are introduced to the paper by functionalization with carbon nanotubes (CNTs) and V2O5, respectively. The Li-storage paper cathodes present a remarkably high rate performance due to the high conductivity of CNTs, short Li+ diffusion length in V2O5 nanocrystals, and more importantly the hierarchical porosity in paper for Li+ transport. The specific capacity of V2O5 is as high as 410 mA h g−1 at 1 C rate, and retains 116 mA h g−1 at a high rate of 100 C in the voltage range of 4.0–2.1 V. To understand the role of mesoporosity in individual cellulose fibers, we created a control structure by intentionally blocking the mesopores in paper with a 20 nm Al2O3 coating applied via atomic layer deposition (ALD). We found that the V2O5 capacity decreases by about 30% at high rates of 5–100 C after blocking, which serves to be the first confirmative evidence of the critical role of mesoporosity in paper fibers for high-rate electrochemical devices.

Fungal cellulases and complexed cellulosomal enzymes exhibit synergistic mechanisms in cellulose deconstruction

Nature has evolved multiple enzymatic strategies for the degradation of plant cell wall polysaccharides, which are central to carbon flux in the biosphere and an integral part of renewable biofuels production. Many biomass-degrading organisms secrete synergistic cocktails of individual enzymes with one or several catalytic domains per enzyme, whereas a few bacteria synthesize large multi-enzyme complexes, termed cellulosomes, which contain multiple catalytic units per complex. Both enzyme systems employ similar catalytic chemistries; however, the physical mechanisms by which these enzyme systems degrade polysaccharides are still unclear. Here we examine a prominent example of each type, namely a free-enzyme cocktail expressed by the fungus Hypocrea jecorina and a cellulosome preparation secreted from the anaerobic bacterium Clostridium thermocellum. We observe striking differences in cellulose saccharification exhibited by these systems at the same protein loading. Free enzymes are more active on pretreated biomass and in contrast cellulosomes are much more active on purified cellulose. When combined, these systems display dramatic synergistic enzyme activity on cellulose. To gain further insights, we imaged free enzyme- and cellulosome-digested cellulose and biomass by transmission electron microscopy, which revealed evidence for different mechanisms of cellulose deconstruction by free enzymes and cellulosomes. Specifically, the free enzymes employ an ablative, fibril-sharpening mechanism, whereas cellulosomes physically separate individual cellulose microfibrils from larger particles resulting in enhanced access to cellulose surfaces. Interestingly, when the two enzyme systems are combined, we observe changes to the substrate that suggests mechanisms of synergistic deconstruction. Insight into the different mechanisms underlying these two polysaccharide deconstruction paradigms will eventually enable new strategies for enzyme engineering to overcome biomass recalcitrance.

Properties of silicon-containing carbon fiber materials prepared using cellulose

Silicon-containing carbon fiber sorbents, which exhibited sufficiently high sorption activity and increased stability to the action of oxygen at high temperatures, as compared with that of an analogous material based on individual cellulose, were prepared by the carbonization and the subsequent activation of cellulose compositions with polycarbosilane.

Ferrocene-Decorated Nanocrystalline Cellulose with Charge Carrier Mobility

Ferrocene-decorated cellulose nanowhiskers were prepared by the grafting of ethynylferrocene onto azide functionalized cotton-derived cellulose nanowhiskers using azide-alkyne cycloaddition. Successful surface modification and retention of the crystalline morphology of the nanocrystals was confirmed by elemental analysis, inductively coupled plasma-atomic emission spectroscopy, X-ray photoelectron spectroscopy, and X-ray diffraction. The coverage with ferrocenyl is high (approximately 1.14 × 10(-3) mol g(-1) or 4.6 × 10(13) mol cm(-2) corresponding to a specific area of 61 Å(2) per ferrocene). Cyclic voltammetry measurements of films formed by deposition of ferrocene-decorated nanowhiskers showed that this small spacing of redox centers along the nanowhisker surface allowed conduction hopping of electrons. The apparent diffusion coefficient for electron (or hole) hopping via Fe(III/II) surface sites is estimated as Dapp = 10(-19) m(2)s(-1) via impedance methods, a value significantly less than nonsolvated ferrocene polymers, which would be expected as the 1,2,3-triazole ring forms a rigid linker tethering the ferrocene to the nanowhisker surface. In part, this is believed to be also due to "bottleneck" diffusion of charges across contact points where individual cellulose nanowhiskers contact each other. However, the charge-communication across the nanocrystal surface opens up the potential for use of cellulose nanocrystals as a charge percolation template for the preparation of conducting films via covalent surface modification (with applications similar to those using adsorbed conducting polymers), for use in bioelectrochemical devices to gently transfer and remove electrons without the need for a solution-soluble redox mediator, or for the fabrication of three-dimensional self-assembled conducting networks.

A Molecular View of Cellulase-Catalyzed Hydrolysis of Cellulose: A Single Molecule Approach

The efficient conversion of biomass to biofuels such as ethanol would meet a large portion of energy requirements in the near future. A crucial step in this process is the enzyme-catalyzed hydrolysis of cellulose to glucose that is then converted into fuel by fermentation. The hydrolysis is complex - it entails the cooperative (synergistic) action of multiple enzymes known collectively as cellulases: endoglucanase, exoglucanase and beta-glucosidase on both insoluble and soluble substrates. In contrast to homogeneous solution-phase catalysis, the overall efficiency of this heterogeneous catalysis process depends on factors in addition to the catalytic rates of the cellulases, including: cellulase absorption, desorption and diffusion rates on the insoluble cellulose substrate, endoglucanase-catalyzed conversion of cellulose from its crystalline to amorphous forms, and the processivity of exoglucanase-catalyzed hydrolysis of individual cellulose strands. To date, due in large part to limitations of the analysis methods used for its study, this heterogeneous reaction is poorly understood. Here we use single-molecule imaging to directly elucidate molecular-level details of cellulase activity that cannot be readily inferred from ensemble averages reported by conventional, bulk analyses.In our research, the activities of exo- and endoglucanases on cellulose microfibrils are investigated at the single-molecule level. Total internal reflection fluorescence microscopy (TIRFM) is used to monitor the activity of individual fluorescently-labeled cellulases interacting with insoluble cellulose substrates. Using wide field imaging, we are able to simultaneously record the motion of multiple, individual cellulases with nanometer spatial resolution. Time-resolved localization microscopy provides insights on: (i) binding and diffusion of enzyme to ‘active’ sites on cellulose; (ii) lifetime of enzyme activity for hydrolysis; (iii) enzyme processivity; and (iv) the nature of synergy between cellulase enzymes.

Zeta Potential Time Dependence Reveals the Swelling Dynamics of Wood Cellulose Nanofibrils

In this paper, we present the swelling dynamics of individual wood cellulose nanofibrils (CNFs) following solvent substitution into various organic solvents and drying, by employing the time dependence of the zeta potential (ζ). We succeeded in smoothly redispersing the coaggregating CNFs dried in solvents, including acetone, acetonitrile, DMSO, ethanol, and t-butanol into water. ζ-t plots of the redispersed CNFs measured in a 1 mM KCl solution indicated different values of Δζ (volume fraction of hydration capacity), corresponding to the dielectric constant of the substituted solvents. Differential scanning calorimetry confirmed that the redispersed CNFs swell to different degrees, corresponding to Δζ. This swelling behavior is characterized by expansion of hemicelluloses, the amorphous polysaccharides located on the CNF surface, with a different degree of aggregation during drying. The specific swelling ratio, radius, and diameter of the CNFs in water were calculated using the values of ζ(0) and ζ(∞) by introducing surface chemical analysis. The calculated diameters of the CNFs at t = 0 coincided well with the median diameters measured directly by transmission electron microscope. Swellability of hemicelluloses exponentially increased with the decrease in dielectric constant of solvent during drying. The analysis method combining zeta potential time dependence and a surface chemical approach proved useful for specifically evaluating the swelling dynamics of polymers on a bulk surface.

Transfer matrix approach to the hydrogen-bonding in cellulose Iα fibrils describes the recalcitrance to thermal deconstruction

Cellulosic biomass has the potential to serve as a major renewable energy source. However, its strong recalcitrance to degradation hampers its large-scale use in biofuel production. To overcome this problem, a detailed understanding of the origins of the recalcitrance is required. One main biophysical phenomenon leading to the recalcitrance is the high structural ordering of natural cellulose fibrils, that arises largely from an extensive hydrogen-bond network between and within cellulose polymers. Here, we present a lattice-based model of cellulose I(α), one of the two major natural forms, at the resolution of explicit hydrogen bonds. The partition function and thermodynamic properties are evaluated using the transfer matrix method. Two competing hydrogen-bond patterns are found. This plasticity of the hydrogen-bond network leads to an entropic contribution stabilizing the crystalline fibril at intermediate temperatures. At these temperatures, an enhanced probability of bonding between the individual cellulose chains gives rise to increased resistance of the entire cellulose fibril to degradation, before the final disassembly temperature is reached. The results are consistent with the available crystallographic and IR spectroscopic experiments on the thermostability of cellulose I(α).

The behaviour of cationic NanoFibrillar Cellulose in aqueous media

This paper deals, with cationically modified NanoFibrillar Cellulose (cat NFC), obtained by reacting a dissolving pulp with 2,3-epoxypropyl trimethylammonium chloride (EPTMAC). The cat NFC was thoroughly characterized in terms of morphology and physical properties. The dimensions of individual cellulose nanofibrils were determined by atomic force microscopy (AFM) imaging in water and in air. Fibrils as thin as 0.8–1.2 nm were observed in water. The fibril diameter changed upon drying and the average size was further quantified by image analysis. The experiments showed the importance of characterizing nanocellulosic materials in situ before drying. The fibril size in air was confirmed by cryogenic transmission electron microscopy (cryo-TEM), and it was found to be 2.6–3.0 nm. Smooth ultrathin films of cationic NFC were prepared by spincoating on silica substrates. The effect of electrolyte concentration and pH on swelling of the cationic NFC film was studied using a quartz crystal microbalance with dissipation. The results showed that at pH = 8 the cat NFC film was insensitive to electrolyte changes while at pH = 4.5, the water content of the film decreased with increasing ionic strength. The electrophoretic mobility measurements showed a cationic zeta potential for the cat NFC that decreased at increasing pH, verifying the swelling behaviour.

The impact of Trichoderma reesei Cel7A carbohydrate binding domain mutations on its binding to a cellulose surface: a molecular dynamics free energy study

A critical role of the Family 7 cellobiohydrolase (Cel7A) carbohydrate binding domain (CBD) is to bind to a cellulose surface and increase the enzyme concentration on the surface. Several residues of Trichoderma reesei Cel7A CBD, including Y5, N29, Y31, Y32 and Q34, contribute to cellulose binding, as revealed by early experimental studies. To investigate the interactions between these important residues and cellulose, we applied a thermodynamic integration method to calculate the cellulose-Cel7A CBD binding free energy changes caused by Y5A, N29A, Y31A, Y32A and Q34A mutations. The experimental binding trend was successfully predicted, proving the effectiveness of the complex model. For the two polar residue mutants N29A and Q34A, the changes in the electrostatics are comparable to those of van der Waals, while for three Y to A mutants, the free energy differences mainly come from van der Waals interactions. However, in both cases, the electrostatics dominates the interactions between individual residues and cellulose. The side chains of these residues are rigidified after the complex is formed. The binding free energy changes for the two mutants Y5W and Y31W were also determined, and for these the van der Waals interaction was strengthened but the electrostatics was weakened.

A Solvent-Free Coarse Grain Model for Crystalline and Amorphous Cellulose Fibrils.

Understanding biomass structure and dynamics on a range of time and length scales is important for the development of cellulosic biofuels. Here, to enable length and time scale extension, we develop a coarse grain (CG) model for molecular dynamics (MD) simulations of cellulose. For this purpose, we use distribution functions from fully atomistic MD simulations as target observables. A single bead per monomer level coarse graining is found to be sufficient to successfully reproduce structural features of crystalline cellulose. Without the use of constraints the CG crystalline fibril is found to remain stable over the maximum simulation length explored in this study (>1 μs). We also extend the CG representation to model fully amorphous cellulose fibrils. This is done by using an atomistic MD simulation of fully solvated individual cellulose chains as a target for developing the corresponding fully amorphous CG force field. Fibril structures with different degrees of crystallinity are obtained using force fields derived using a parameter coupling the crystalline and amorphous potentials. The method provides an accurate and constraint-free approach to derive CG models for cellulose with a wide range of crystallinity, suitable for incorporation into large-scale models of lignocellulosic biomass.

Wood cellulose nanofibrils prepared by TEMPO electro-mediated oxidation

A softwood bleached kraft pulp (SBKP) was subjected to electro-mediated oxidation in water with TEMPO or 4-acetamido-TEMPO without any chlorine-containing oxidant. Solid recovery ratios of water-insoluble fractions of the oxidized SBKPs were more than 80%, and C6-carboxylate contents increased up to approximately 1 mmol g−1 after oxidation for 48 h. Significant amounts of C6-aldehyde groups (0.17–0.38 mmol g−1) were also formed in the oxidized SBKPs. The degree of polymerization decreased from 2,200 to 520 and 1,400 by the oxidation for 48 h with TEMPO at pH 10 and 4-acetamido-TEMPO at pH 6.8, respectively. The original cellulose I crystal structure and crystallinity of SBKP were maintained after the oxidation, indicating that all C6-oxidized groups were selectively formed on crystalline cellulose microfibril surfaces. The oxidized SBKPs with carboxylate contents of more than 0.9 mmol g−1 were convertible to individual cellulose nanofibrils in yields of more than 80% by disintegration in water.

Preparation and characterization of TEMPO-oxidized cellulose nanofibril films with free carboxyl groups

A 2,2,6,6-tetramehylpiperidine-1-oxy radical (TEMPO)-oxidized wood cellulose with sodium carboxylate groups was completely converted to individual TEMPO-oxidized cellulose nanofibrils with free carboxyl groups (TOCN-COOH) dispersed in water at pH 4.6. Self-standing films prepared by casting and drying of the TOCN-COOH/water dispersion were flexible and highly transparent. Fourier transform infrared (FT-IR) spectra and sodium content determination confirmed that the sodium carboxylate groups of TOCN-COONa were almost completely converted to free carboxyl groups in TOCN-COOH. The TOCN-COOH and TOCN-COONa films had similar densities and tensile strengths, but the former had lower moisture content, higher Young's modulus and lower elongation values than those of the latter. The oxygen permeability of the TOCN-COOH films was 0.049mLμmm−2day−1kPa−1, which was clearly lower than that (15.5mLμmm−2day−1kPa−1) of poly(ethylene terephthalate) films.