The formation of arrested charnockite is an excellent example of structurally controlled channellised fluid flow along specific sites accompanied by selective elemental mobility and mineralogical changes. The present paper recognises and focuses study on three types of arrested charnockite formation from Palghat region, namely, shear-controlled, foliation parallel and boudin-neck types, and address their spatio-temporal relations to regional-scale charnoenderbite. The shear-controlled and foliation parallel types post-date deformation and migmatisation. The boudin-neck type, on the contrary, is coeval with partial melting and followed the path of cooling and decreasing water activity in the gneiss. K-feldspar veining around plagioclase and quartz, symplectitic intergrowth of biotite+quartz after orthopyroxene and K-feldspar, and fluid inclusion data suggests the presence of alkalic supercritical brine and low-density CO 2-rich fluid during charnockite formation. Charnockite domains developed following the breakdown of hornblende, biotite and quartz are characterised by a more or less pronounced depletion of Fe, Ca, Mg and Ti and trace elements Y and Zr, compared to their counterpart gneiss. REE spectra indicate a subtle depletion in the HREE near the centre of the charnockite domain. Although close-pair samples of gneiss–charnockite are isochemical, on a scale of a few millimetres, bi-directional element movement, related to the formation of new mineral was noted. It is postulated that arrested charnockite formation developed in situ on local scale within the granitic domains of the hornblende-biotite gneiss, in the presence of CO 2-rich fluids and alkalic supercritical saline brine. This process post-dated the time of regional granulite (charnoenderbite) and large regional scale retrogression and migmatisation.