In this work, hydrogenated SiGe thin films epitaxially grown on crystalline Si (c-Si) at 175 °C are annealed at 800 °C in a low vacuum system. The influence of H from the thin film and residual O atoms in the vacuum system on the structural changes of SiGe is presented. Multilayers consisting of c-Si/SiGe/void/Ge/SiOx/SiGeOx are obtained by taking advantage of the hydrogen present in the epitaxial SiGe layer. Various annealing conditions are applied to study the evolution of SiGe layers. The surface morphology, crystallinity, composition and micro structure of the multilayer stack formed during the annealing process are investigated in detail. A discussion based on the diffusion of H and O atoms is presented to account for this extraordinary process.