The folding of acidified staphylococcal nuclease, upon neutralization, was studied in a stopped-flow spectrofluorometer by measuring the increase in tryptophanyl fluorescence during renaturation. At 25 °C and 0.1 ionic strength, the fluorescence change may be described by two first-order rate processes with half-times of 55 and 350 msec. No significant change in either rate was effected on varying the initial pH from 3.2 to 3.8 (corresponding to 0 to 50% levels of folding) or the initial ionic strength from 0.001 to 0.1. In contrast, the over-all rate of folding is dependent upon temperature. The half-time of the slower rate process decreases from 600 msec at 13 °C to 150 msec at 38 °C; the half-time of the faster rate process does not change significantly over this temperature range. These results suggest that the two processes may correspond to a sequence involving nucleation of ordered structure followed by the formation of hydrophobic interactions. Possible structural correlates of these processes are discussed with respect to the crystallographic model of this protein.
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