Exponential Growth Phase Research Articles

Detecção de estresse nutricional em cana-de-açúcar por espectroscopia de reflectância VIS-NIR-SWIR

ABSTRACT: This study applied spectroradiometry techniques with hyperspectral data to identify the correlations between sugarcane leaf reflectance and the contents of Nitrogen (N), phosphorus (P), Potassium (K), Sulfur (S), Calcium (Ca) and Magnesium (Mg). During the harvests 2019/20 and 2020/21, sugarcane was introduced to nutritional stress by the application of limestone doses. Liming was applied in a fractional way and, at the end of five years, the amounts corresponded to 0, 9, 15 and 21 t ha-1 of dolomitic limestone. The leaf hyperspectral reflectance data and the state of nutrients in the exponential growth phase of the culture were registered. The wavelengths correlated with N, P, K, S, Ca and Mg were identified using the Spearman’s correlation analysis. The test of similarity (ANOSIM) and the Principal Component Analysis (PCA) were applied to evaluate data variability, as well as the Partial Least Squares Regression (PLSR) for the prediction of the nutritional contents. The order of the degree of correlation in the region of visible was: P > K > N > Ca > S > Mg and for the region of the near infrared: P > K > Ca > N > S > Mg. P presented peaks with high correlations in the wavelengths 706-717 nm (-0.78) and 522-543 nm (-0.76). The values of the PLSR registered the best spectral responses in the region of VIS and red-edge, regions that are more sensitive to the deficiency of sulfur, potassium and phosphorus.

Algae as an alternative to the methods of production and use of conventional biomass (review article)

Algae have been present in the water treatments technologies, food for animals makingprocesses or even for diet supplements production for many years now. Recent years, however, have brought a number of ideas and discoveries for a wider use of these autotrophs. Their use is related to the broadly understood environmental protection and many threads of combating climate change. Currently, one of the most common ways of using algae is the production of liquid biofuels of the 3 rd and 4 th generation and unconventional biomass generation. Biofuels obtained from algae, in addition to lower amounts of harmful substances contained in them, are often characterized by a negative emission balance. It is related to the fact that those organisms, being in an exponential growth phase, assimilate the carbon dioxideneeded for photosynthesis. The production of energy substances from algae and microalgae in the teeth of draining fossil fuel deposits and their destructive impact on the environment. That sooth combined with the ease and low cost of culture, condition they become a real alternative to existing energy sources. Unique properties of algae linked with the fact that they are among the best, known biological energy converters opens the way to a number of opportunities to use them in other economic sectors. Certainly, the technological revolution in the energy market in addition to the requirement to create the most efficient reactors, in-depth research on the properties of fuels and the producers themselves still needs to be regulated by law. Algae can be grown in polluted waters, and the energy raw materials produced from them are able to reach (without emission logistic costs) a negative balance of 𝐶𝑂2 emissions. This phenomenon and the fact that apart from fuels and biogas, they can be used for purposes such as carbon sequestration, creating energy biomass, medicines and dietary supplements, as well as food for animals, for example, the most reasonable choice would be to create advanced regulations regarding the closed- circuit policy in the energy sector, based precisely on biologically active organisms. This work focuses on gathering and presenting basic information regarding current technologies related to algae, their potential uses in the energy sector, and the long-term prospects for their development. It also takes into account the issues associated with the holistic nature of energy harvesting methods such as the one discussed. Key words: algae, bioeconomy, biofuels, biorefinery

Sustainable utilization of dairy waste paneer whey by Pediococcus pentosaceus NCDC 273 for lactic acid production

The current study was performed to test the ability of the Pediococcus pentosaceus NCDC 273 strain for rapid utilization of lactose from paneer whey. We optimized the lactose utilization by monitoring the constitutive expression of the β-gal gene using real-time RT-PCR and also quantified lactic acid production using high-performance liquid chromatography (HPLC). Screening of β-gal gene for lactose utilization efficiency in P. pentosaceus NCDC 273 strain efficiency showed a significant (P < 0.0001) expression of the β-gal gene in the supplemented paneer whey medium (SPWM; lactose rich) compared to commercially available Deman-Rogosa-Sharpe (MRS; d-glucose rich) broth medium. In addition, with the growth of P. pentosaceus NCDC 273 in SPWM, the expression of the β-gal gene was found significantly (P < 0.001) higher at 6h of fermentation during the exponential growth phase and declining no significantly at stationary phase. After 48 h of incubation, HPLC data revealed a high lactose conversion rate (42.12%) to lactic acid production (14.50 ± 0.48 g L−1). Moreover, pediocin PA-1 activity in fermented SPWM showed almost contamination-free lactic acid production. Hence, our results showed the sustainable utilization of dairy waste paneer whey for lactic acid production by P. pentosaceus NCDC 273 at a lower disposal cost.

Identification of novel genes involved in the biofilm formation process of Avian Pathogenic Escherichia coli (APEC).

Avian pathogenic Escherichia coli (APEC) is the etiological agent of avian colibacillosis, a leading cause of economic loss to the poultry industry worldwide. APEC causes disease using a diverse repertoire of virulence factors and has the ability to form biofilms, which contributes to the survival and persistence of APEC in harsh environments. The objective of this study was to identify genes most widespread and important in APEC that contribute to APEC biofilm formation. Using the characterized APEC O18 as the template strain, a total of 15,660 mutants were randomly generated using signature tagged mutagenesis and evaluated for decreased biofilm formation ability using the crystal violet assay. Biofilm deficient mutants were sequenced, and a total of 547 putative biofilm formation genes were identified. Thirty of these genes were analyzed by PCR for prevalence among 109 APEC isolates and 104 avian fecal E. coli (AFEC) isolates, resulting in nine genes with significantly greater prevalence in APEC than AFEC. The expression of these genes was evaluated in the wild-type APEC O18 strain using quantitative real-time PCR (qPCR) in both the exponential growth phase and the mature biofilm phase. To investigate the role of these genes in biofilm formation, isogenic mutants were constructed and evaluated for their biofilm production and planktonic growth abilities. Four of the mutants (rfaY, rfaI, and two uncharacterized genes) displayed significantly decreased biofilm formation, and of those four, one (rfaI) displayed significantly decreased growth compared to the wild type. Overall, this study identified novel genes that may be important in APEC and its biofilm formation. The data generated from this study will benefit further investigation into the mechanisms of APEC biofilm formation.

Reconstructing the Temporal Origin and the Transmission Dynamics of the HIV Subtype B Epidemic in St. Petersburg, Russia.

The HIV/AIDS epidemic in Russia is among the fastest growing in the world. HIV epidemic burden is non-uniform in different Russian regions and diverse key populations. An explosive epidemic has been documented among people who inject drugs (PWID) starting from the mid-1990s, whereas presently, the majority of new infections are linked to sexual transmission. Nationwide, HIV sub-subtype A6 (previously called AFSU) predominates, with the increasing presence of other subtypes, namely subtype B and CRF063_02A. This study explores HIV subtype B sequences from St. Petersburg, collected from 2006 to 2020, in order to phylogenetically investigate and characterize transmission clusters, focusing on their evolutionary dynamics and potential for further growth, along with a socio-demographic analysis of the available metadata. In total, 54% (107/198) of analyzed subtype B sequences were found grouped in 17 clusters, with four transmission clusters with the number of sequences above 10. Using Bayesian MCMC inference, tMRCA of HIV-1 subtype B was estimated to be around 1986 (95% HPD 1984-1991), whereas the estimated temporal origin for the four large clusters was found to be more recent, between 2001 and 2005. The results of our study imply a complex pattern of the epidemic spread of HIV subtype B in St. Petersburg, Russia, still in the exponential growth phase, and in connection to the men who have sex with men (MSM) transmission, providing a useful insight needed for the design of public health priorities and interventions.

Deletion of the ATP20 gene in Ustilago maydis produces an unstable dimer of F1FO-ATP synthase associated with a decrease in mitochondrial ATP synthesis and a high H2O2 production

The F1FO-ATP synthase uses the energy stored in the electrochemical proton gradient to synthesize ATP. This complex is found in the inner mitochondrial membrane as a monomer and dimer. The dimer shows higher ATPase activity than the monomer and is essential for cristae folding. The monomer-monomer interface is constituted by subunits a, i/j, e, g, and k. The role of the subunit g in a strict respiratory organism is unknown. A gene knockout was generated in Ustilago maydis to study the role of subunit g on mitochondrial metabolism and cristae architecture. Deletion of the ATP20 gene, encoding the g subunit, did not affect cell growth or glucose consumption, but biomass production was lower in the mutant strain (gΔ strain). Ultrastructure observations showed that mitochondrial size and cristae shape were similar in wild-type and gΔ strains. The mitochondrial membrane potential in both strains had a similar magnitude, but oxygen consumption was higher in the WT strain. ATP synthesis was 20 % lower in the gΔ strain. Additionally, the mutant strain expressed the alternative oxidase in the early stages of growth (exponential phase), probably as a response to ROS stress. Dimer from mutant strain was unstable to digitonin solubilization, avoiding its isolation and kinetic characterization. The isolated monomeric state activated by n-dodecyl-β-D-maltopyranoside showed similar kinetic constants to the monomer from the WT strain. A decrease in mitochondrial ATP synthesis and the presence of the AOX during the exponential growth phase suggests that deletion of the g gene induces ROS stress.

The effectiveness of biofilm formation of daily cultures of clinically significant strains of opportunistic bacteria

Background. The formation of biofilm structures by microorganisms living in the hospital environment is a serious medical problem. To conduct correct experimental studies, it is necessary to know the speed and efficiency of biofilm formation by clinically significant species of opportunistic bacteria. Aim: to study the kinetics of plankton culture growth and the rate of biofilm formation by clinically significant pathogens of infections associated with medical care to substantiate the methodology of further research. Materials and methods. The strains from the working collection of the Laboratory for Microbiome and Microecology of the Scientific Сentre for Family Health and Human Reproduction Problems were used. Experiments were carried out with conditionally pathogenic microorganisms of the Enterobacteriaceae family and non-fermenting gram-negative bacteria. The optical density was measured, the total microbial number of the cell suspension was determined, and the morphological structure of the biofilm was evaluated using a light microscope on sterile cover glasses for thespecies Pseudomonas aeruginosa, Klebsiella pneumoniae and Serratia marcescens. Results. The duration of the lag phase of the kinetic curve of cell growth varied in isolates of S. marcescens, P. aeruginosa and K. pneumoniae from 1 to 4 and 6 hours of cultivation, respectively. Despite this, the exponential growth phase was the same for all tested isolates and amounted to 4 hours. Thus, isolates of clinically significant species entered the stationary growth phase after 5–10 hours of cultivation and were characterized as fast-growing. On abiotic surfaces, after 8 hours of incubation of the tested cultures, the initial stages of the formation of biofilm structures were observed, after 20 hours the formed multilayer biofilm was visualized, after 24 hours succession occurred, new single cells were attached to the place of the detached structures. Conclusion. The data obtained on the duration of the main stages of growth kinetics compared with the visualization of the formation of biofilm structures on abiotic surfaces should be taken into account when studying the effects of disinfectants, antiseptics and antibacterial drugs on planktonic cells and biofilm associations of clinically significant opportunistic microorganisms.

First study of Micromonospora echinospora isolation from a rocky site of Eastern Algeria and first report of its potential use in cementitious materials biohealing

In recent years, bio-healing based on microbial induced carbonate precipitation in cracks has been widely exploited to improve concrete properties and thus increase its durability. In this context, the present study aims to explore the possibility of using nine bacterial isolates as biohealing agent of cementitious materials; these bacteria (coded B1 to B8) were obtained from the three different rocky sites, i.e., 795 L1 (limestone rock site), 795 L2 (ordinary soil site), and 812 (clayey site); situated in Oulad Rahmoun (Constantine-Algeria). The primary identification showed that eight isolates belonged to a Bacillus genus, and one isolate B8 developed particularly morphological characterized by branched and septate hyphae. The isolates B4 and B8 were selected for their ability to produce calcium carbonate in precipitate calcium (PC) liquid and solid media after five days of incubation. The addition of urea in PC liquid media accelerated the formation of calcite which appeared after 3 days of incubation. The growth curve of both selected isolates on LB liquid medium showed that B8 was characterized by a long exponential growth phase (up to 72 hours) compared to B4 which had an exponential phase up to 48 hours, which could explain the largest amount of calcite precipitate observed in the case of B8 cultivated in PC liquid medium. Results of the bio-healing experiment carried on cementitious batches showed that a beginning of a slight repair of the cracks from the 11th day was only observed in the case of the bacterium B8 but the bio-healing capacity was absent in the control. This bio-healing agent was identified as Micromonospora echinospora (NCBI-NO139612), according to N-Blast of 16S-DNA sequence. In conclusion, the present study is the first to isolate M. echinospora species from rocky sites; and to describe it as an efficient bacterial agent in concrete bio-healing applications.

Metabolite Profile of the Micromycete Lecanicillium gracile Isolated from Plaster and Limestone.

Lecanicillium gracile is a recently described micromycete species isolated from mineral-based building materials (plaster and limestone) in interiors of cultural heritage sites in Russia. In this work, the composition of L. gracile metabolites, as well as of the culture liquid, have been characterized. The results suggest that L. gracile is a promising candidate for the search for novel biologically active compounds. During the exponential growth phase, the diversity of metabolites in the mycelium was low; the metabolome profile demonstrated predominant accumulation of monosaccharides and polyols. In the stationary phase, the metabolite diversity in the L. gracile mycelium was high; apparently, at this stage biosynthesis dominated over energy-producing processes. L. gracile synthesized extracellular polymer compounds and shifted medium рН to the alkaline range. When fungi are developing on rock substrates, their extracellular polymer matrix not only serves to facilitate the formation of biofilms with other microorganisms of lithobiont communities, but also, at alkaline pH values, it promotes the formation of secondary calcite on calcium-containing substrates, such as limestone and marble. That is, L. gracile possesses certain biochemical traits that facilitate its long-term growth on rock substrates and reflect the specific character of interactions between the fungus and the substrate materials.

First insight into H3K4me3 modification in the rapid growth of Alexandrium pacificum (dinoflagellates)

BackgroundAlexandrium pacificum is a dinoflagellate species notorious for its rapid growth resulting in large-scale blooms. This study aimed to investigate the molecular mechanisms of A. pacificum under laboratory-simulated rapid growth conditions from the perspective of H3K4me3 modification regulation.Methods and resultsWestern blot was used to detect the modification abundance of H3K4me3 in A. pacificum cultured under different conditions, including high light (HL), high nitrogen (HN), and f/2 medium (control, CT), in the rapid growth exponential phase. The results showed that the modification abundance of H3K4me3 under HL or HN was greater than that under CT. Chromatin immunoprecipitation-sequencing was used to explore the acting genes of H3K4me3 under different conditions for the first time. Nitrogen metabolism and endocytosis were significantly associated with H3K4me3 regulation under HL. Furthermore, H3K4me3 was also significantly associated with the vitamin metabolism pathway under HN.ConclusionsThese findings demonstrate that H3K4me3 plays a potentially important role in the regulation of the rapid growth of A. pacificum. Such knowledge of a histone modification regulatory network in this dinoflagellate, lays a necessary foundation for future research in related fields.

Pseudomonas veronii strain 7–41 degrading medium-chain n-alkanes and polycyclic aromatic hydrocarbons

Pollution of the environment by crude oil and oil products (represented by various types of compounds, mainly aliphatic, mono- and polyaromatic hydrocarbons) poses a global problem. The strain Pseudomonas veronii 7–41 can grow on medium-chain n-alkanes (C8–C12) and polycyclic aromatic hydrocarbons such as naphthalene. We performed a genetic analysis and physiological/biochemical characterization of strain 7–41 cultivated in a mineral medium with decane, naphthalene or a mixture of the hydrocarbons. The genes responsible for the degradation of alkanes and PAHs are on the IncP-7 conjugative plasmid and are organized into the alk and nah operons typical of pseudomonads. A natural plasmid carrying functional operons for the degradation of two different classes of hydrocarbons was first described. In monosubstrate systems, 28.4% and 68.8% of decane and naphthalene, respectively, were biodegraded by the late stationary growth phase. In a bisubstrate system, these parameters were 25.4% and 20.8% by the end of the exponential growth phase. Then the biodegradation stopped, and the bacterial culture started dying due to the accumulation of salicylate (naphthalene-degradation metabolite), which is toxic in high concentrations. The activity of the salicylate oxidation enzymes was below the detection limit. These results indicate that the presence of decane and a high concentration of salicylate lead to impairment of hydrocarbon degradation by the strain.

Deletion of the cheZ gene results in the loss of swimming ability and the decrease of adhesion ability to Caco-2 cells in Escherichia coli Nissle 1917.

The aim of this study was to elucidate the biological functions of the motility regulatory protein CheZ in the probiotic strain Escherichia coli Nissle 1917. A cheZ gene deletion strain Nissle 1917ΔcheZ was constructed using the CRISPR/Cas9 two-plasmid system, and the corresponding complemented strain Nissle 1917ΔcheZ/pBR322-cheZ was established. Combined studies of growth kinetics testing, motility assays, swarming motility assays, and bacterial adherence assays were performed to study the motility regulatory protein CheZ-mediated functions in the prototype Nissle 1917 strain, its isogenic cheZ mutant, and the corresponding complemented strain. The growth rate of the cheZ mutant strain was lower than that of the wild-type strain in the exponential growth phase. The motility of the cheZ mutant strain was significantly lower than that of the wild-type strain. And the adhesion ability of ΔcheZ mutant to the Caco-2 cells was significantly lower than that of the wild-type strain and complemented strain. In conclusion, the results presented in our study suggested that the deletion of the cheZ gene in E. coli Nissle 1917 led to a significant reduction of its swimming ability and a subsequent marked decrease of adhesion to the Caco-2 cells.

Sustainable development goals: a bibliometric analysis of literature reviews.

The research in sustainable development goals (SDG) increases year by year since its approval in 2015. Typically, after a phase of exponential growth, the number of publications increases at lower rates, suggesting a consolidation process in which literature reviews become a relevant and high-evidence type of document. In this context, the aim of this study was to perform an unprecedented bibliometric analysis of literature reviews on SDG to assess the evolution and consolidation of the scientific research. Article reviews on SDG from 2015 to 2022 were retrieved from Web of Science core collection and a descriptive bibliometric analysis was performed by growth rate, research area, source, citation, and region. Mapping and cluster analysis using keyword co-occurrence, co-authorship, and bibliographic coupling were also applied. The result revealed that SDG is a fast-growing field, with a trend in the diversification of research areas. Most of the review documents were categorized in general aspects of sustainability. Technology (SDG 9) and economic growth (SDG 8) were spotted as hidden key research areas. This result is contrary to previous bibliometric studies on SDG, demonstrating the rapid evolution and change in the field. In addition, literature reviews on reduced inequalities (SDG 10), gender equality (SDG 5); oceans, seas, and marine environments (SDG 14); and peace, justice, and strong institutions (SDG 16) were revealed as research gaps. Thus, the results demonstrated that the research on SDG cannot yet be considered a consolidated area of research, as it leaves many SDG unexplored. Future research has been proposed accordingly.

Growth kinetics and purifying performance of A. Platensis in stirring-free culture based on brewery effluent's supernatant.

Due to costs of setting up and operating electrical stirring systems to keep algae in suspension andexposed to light,cultivation of monospecific algae is poorly expanded in developing countries. However, some algal species, such as Arthrospira platensis, are equipped with gaseous vesicles that allow them to stay afloat and increase their exposure to light. In this study, we investigated in an unstirred outdoor environment, its growth kinetic and purifying performance in abrewery effluent-based media. Batch cultures were carried out in three experimental treatments and evolution of physicochemical and growth parameters were monitored. Then its contribution to depollution was determined. Results show that optimal conditions for producing A. platensis include the culture tank transparency, the effluent dilution (i.e. 10%), and the culture media amendment with sodium bicarbonate and sodium nitrate. The average productivity recorded reached 0.55 g DW·L-1·d-1 during the exponential growth phase, while preserving culture from contamination. COD and total nitrogen concentrations were reduced to 32.5 and 64.91%. Such results open up prospects for low-cost production of certain algae, in transparent and relatively high barrels, thus breaking the classic barriers related to shallow basin depth and mechanical agitation traditionally considered as critical to the success of algal production.

Ecophysiological characterization of a nitrite-oxidizing bacterial culture from a freshwater aquaculture pond

Nitrite is harmful to aquatic animals in freshwater pond aquaculture environments. Nitrite is oxidized to nitrate mainly by nitrite-oxidizing bacteria (NOB). NOB may be promising in the control of nitrite concentration in aquaculture water. To better understand the role of NOB in the nitrogen cycling process of freshwater aquaculture ponds, we describe the characterization of NOB by using a culture derived from a freshwater aquaculture pond. Analysis by 16S rRNA sequence alignment showed that the NOB in the culture belong to the genus Nitrospira, whose generation time and nitrite–oxidizing rate were 9.87 h and 4.63 (± 0.07) pg NO2 −–N cell−1·h−1 in the exponential growth phase, respectively. The oxidation of nitrite could be inhibited completely when the concentration of dissolved oxygen was 1.0 ± 0.5 mg/L.−1 The NOB could oxidize nitrite into nitrate at 29.84‰ salinity. However, the nitrification rate decreased significantly with an increase in salinity concentration ranging from 5.72‰ to 29.84‰. The optimal temperature range was 25–37 °C for the growth of NOB, and activity significantly decreased when the temperature was below 20 °C or reached 40 °C. In this study, the initial pH 6 ± 0.1–8 ± 0.1 was not observed to affect the nitrification activity of the NOB culture. Illumination of 410 ± 10 nm can completely inhibit NOB nitrification, and 520 ± 10 nm illumination partially inhibits NOB, whereas 660 ± 10 nm illumination has no effect. These findings indicate that the degree of photoinhibition in NOB increases with decreasing wavelength.

RNA Interference of Phenoloxidases of the Fall Armyworm, Spodoptera frugiperda, Enhance Susceptibility to Bacillus thuringiensis Protein Vip3Aa19.

Phenoloxidase (PO) is an important enzyme in the cellular immune system and is involved in defense against a wide range of pathogens, including Bacillus thuringiensis. Vip3Aa19 is secreted and expressed by Bacillus thuringiensis (Bt) at the middle exponential growth phase and is a kind of protein with efficient insecticidal activity against Spodoptera frugiperda. However, immune responses of the target insects have been regarded as a hindrance to Bt pathogenicity. This paper reports two phenoloxidase (PO) genes (SfPAE and SfPO2) identified from the hemocyte transcriptome data of the fall armyworm, Spodoptera frugiperda. qRT-PCR validation results showed that the expression levels of two PO genes were significantly upregulated after Vip3Aa19 (LC50 = 4.98 µg/g) toxin treatment compared with those of S. frugiperda fed an insecticide-free artificial diet. Meanwhile, two PO genes were expressed from the egg to adult stages even without an immune challenge. We noticed that at all developmental stages investigated in the S. frugiperda, SfPAE was generally expressed at a higher level than SfPO2. However, after Vip3Aa19 treatment, the SfPO2 gene mRNA expression level was significantly elevated in response to the toxin challenge. An injection of a specific double-stranded RNA (dsRNA) against POs could suppress its expression. The third instar larvae of S. frugiperda treated with dsRNA were much more susceptible to Vip3Aa19 toxin than the control larvae were. Notably, the mortality rate was nearly 90% after a dsPO2 injection. These results proved that SfPO2 was more important for the survival of S. frugiperda. Finally, RNA interference and then PO activity detection revealed that PO genes mainly existed in the hemolymph and played an important role in immune defense against Bt toxin.

Bacterial Metabolites and Particle Size Determine Cerium Oxide Nanomaterial Biotransformation.

Soil is a major receptor of manufactured nanomaterials (NMs) following unintentional releases or intentional uses. Ceria NMs have been shown to undergo biotransformation in plant and soil organisms with a partial Ce(IV) reduction into Ce(III), but the influence of environmentally widespread soil bacteria is poorly understood. We used high-energy resolution fluorescence-detected X-ray absorption spectroscopy (HERFD-XAS) with an unprecedented detection limit to assess Ce speciation in a model soil bacterium (Pseudomonas brassicacearum) exposed to CeO2 NMs of different sizes and shapes. The findings revealed that the CeO2 NM's size drives the biotransformation process. No biotransformation was observed for the 31 nm CeO2 NMs, contrary to 7 and 4 nm CeO2 NMs, with a Ce reduction of 64 ± 14% and 70 ± 15%, respectively. This major reduction appeared quickly, from the early exponential bacterial growth phase. Environmentally relevant organic acid metabolites secreted by Pseudomonas, especially in the rhizosphere, were investigated. The 2-keto-gluconic and citric acid metabolites alone were able to induce a significant reduction in 4 nm CeO2 NMs. The high biotransformation measured for <7 nm NMs would affect the fate of Ce in the soil and biota.

Photosynthetic Carbon Uptake Correlates with Cell Protein Content during Lipid Accumulation in the Microalga Chlorella vulgaris NIES 227

Large-scale microalgae cultivation for biofuel production is currently limited by the possibility of maintaining high microalgae yield and high lipid content, concomitantly. In this study, the physiological changes of Chlorella vulgaris NIES 227 during lipid accumulation under nutrient limitation was monitored in parallel with the photosynthetic capacity of the microalgae to fix carbon from the proxy of oxygen productivity. In the exponential growth phase, as the biomass composition did not vary significantly (approx. 53.6 ± 7.8% protein, 6.64 ± 3.73% total lipids, and 26.0 ± 9.2% total carbohydrates of the total biomass dry-weight), the growth capacity of the microalgae was preserved (with net O2 productivity remaining above (4.44 ± 0.93) × 10−7 g O2·µmol PAR−1). Under nutrient limitation, protein content decreased (minimum of approx. 18.6 ± 6.0%), and lipid content increased (lipid content up to 56.0 ± 0.8%). The physiological change of the microalgae was associated with a loss of photosynthetic activity, down to a minimum (1.27 ± 0.26) × 10−7 g O2·µmol PAR−1. The decrease in photosynthetic O2 productivity was evidenced to correlate to the cell internal-protein content (R2 = 0.632, p = 2.04 × 10−6, N = 25). This approach could serve to develop productivity models, with the aim of optimizing industrial processes.

Green Extracellular Synthesis of Silver Nanoparticles by Pseudomonas alloputida, Their Growth and Biofilm-Formation Inhibitory Activities and Synergic Behavior with Three Classical Antibiotics.

Bacterial resistance to antibiotics is on the rise and hinders the fight against bacterial infections, which are expected to cause millions of deaths by 2050. New antibiotics are difficult to find, so alternatives are needed. One could be metal-based drugs, such as silver nanoparticles (AgNPs). In general, chemical methods for AgNPs' production are potentially toxic, and the physical ones expensive, while green approaches are not. In this paper, we present the green synthesis of AgNPs using two Pseudomonas alloputida B003 UAM culture broths, sampled from their exponential and stationary growth phases. AgNPs were physicochemically characterized by transmission electron microscopy (TEM), total reflection X-ray fluorescence (TXRF), infrared spectroscopy (FTIR), dynamic light scattering (DLS), and X-ray diffraction (XRD), showing differential characteristics depending on the synthesis method used. Antibacterial activity was tested in three assays, and we compared the growth and biofilm-formation inhibition of six test bacteria: Bacillus subtilis, Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa, Staphylococcus aureus, and Staphylococcus epidermidis. We also monitored nanoparticles' synergic behavior through the growth inhibition of E. coli and S. aureus by three classical antibiotics: ampicillin, nalidixic acid, and streptomycin. The results indicate that very good AgNP activity was obtained with particularly low MICs for the three tested strains of P. aeruginosa. A good synergistic effect on streptomycin activity was observed for all the nanoparticles. For ampicillin, a synergic effect was detected only against S. aureus. ROS production was found to be related to the AgNPs' antibacterial activity.

Thallusin Quantification in Marine Bacteria and Algae Cultures.

Thallusin, a highly biologically active, phytohormone-like and bacterial compound-inducing morphogenesis of the green tide-forming macroalga Ulva (Chlorophyta), was determined in bacteria and algae cultures. A sensitive and selective method was developed for quantification based on ultra-high-performance liquid chromatography coupled with electrospray ionization and a high-resolution mass spectrometer. Upon C18 solid phase extraction of the water samples, thallusin was derivatized with iodomethane to inhibit the formation of Fe−thallusin complexes interfering with the chromatographic separation. The concentration of thallusin was quantified during the relevant phases of the bacterial growth of Maribacter spp., ranging from 0.16 ± 0.01 amol cell−1 (at the peak of the exponential growth phase) to 0.86 ± 0.13 amol cell−1 (late stationary phase), indicating its accumulation in the growth medium. Finally, we directly determined the concentration of thallusin in algal culture to validate our approach for monitoring applications. Detection and quantification limits of 2.5 and 7.4 pmol L−1, respectively, were reached, which allow for quantifying ecologically relevant thallusin concentrations. Our approach will enable the surveying of thallusin in culture and in nature and will thus contribute to the chemical monitoring of aquaculture.