Simple SummaryWe performed post-mortem investigations of 121 Common Eiders (Somateria mollissima), which were incidentally caught in fishing gear from 2017 to 2019 in Denmark. The aim of the study was to obtain an overview of health issues and pathogens occurring in the population of these birds. The European population of the Common Eider is endangered, but the reasons for the decline of the population have not yet been determined. In times of accelerating species loss, it is important to determine factors that impact population numbers of declining species. The post-mortem investigations included biometric measurements and determination of age, sex and nutritional status, as well as parasitological, bacteriological and virological investigations. The majority of Common Eiders had a good or moderate nutritional status. Most animals were infected with intestinal parasites, and we commonly found inflammation in organs like the liver, kidneys, intestine and the oesophagus. In three animals, a pathogenic bacterium caused inflammatory lesions in several organs. We did not find signs for epizootic diseases or pathologies, which would explain the declining species numbers. The Common Eider (Somateria mollissima) inhabits the entire northern hemisphere. In northern Europe, the flyway population reaches from the southern Wadden Sea to the northern Baltic coast. The European population is classified as endangered due to declines in Common Eider numbers across Europe since 1990. In this study, we assessed 121 carcasses of Common Eiders, captured incidentally in gillnets in the Western Baltic between 2017 and 2019. The most common findings were parasitic infections of the intestine by acanthocephalans in 95 animals, which correlated with enteritis in 50% of the cases. Parasites were identified as Profilicollis botulus in 25 selected animals. Additionally, oesophageal pustules, erosions, and ulcerations, presumably of traumatic origin, were frequently observed. Nephritis and hepatitis were frequent, but could not be attributed to specific causes. Lung oedema, fractures and subcutaneous haemorrhages likely resulted from entangling and drowning. Two Common Eiders had mycobacterial infections and in one of these, Mycobacterium avium subspecies (ssp.) avium was identified. This study gives an overview of morphological changes and infectious diseases from one location of the European flyway population. It contributes to future health studies on Common Eiders in the Baltic and Wadden Seas by providing baseline information to compare with other areas or circumstances.
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