Abstract Background and Objectives Recently, there has been a surge in non-invasive diagnosing methods leveraging the dipolar 12-lead ECG information using Convolutional Neural Networks (CNNs). However, the traditional ECG contains 12 projections of the cardiac dipole in a three-dimensional space can result in redundancy. Furthermore, in continuous monitoring systems such as Holter and wearables, not all 12 leads are consistently available. This study aims to quantify redundancy and determine the best lead configuration for improved classification results using a CNN. It evaluates the level of redundancy in ECG leads and its impact on CNN classification. Methods The degree of redundancy was quantified by means of lead entropies (H) as depicted in Figure 1.A. The standard 12-lead ECG was chosen as the baseline input. From it, various subsets of leads were selected (6, 3, 1 leads) with the objective of attaining maximal orthogonality between leads while minimizing redundancy (Figure 1.B). A 2D-CNN model was trained for multiclass classification: Hypertension (HYP), ST-T interval Changes (STTC), Conduction Disturbances (CD), Myocardial Infarction (MI) and Normal (NORM). The designed inputs were employed to evaluate how redundancy impacts the performance of the CNN (see Figure 1.C). Results Reducing redundancy in input leads led to notable improvements in model prediction for all pathological conditions in terms of Area Under the Curve (AUC). Reducing to 6 and 8 leads were the most suitable input for the CNN (Table 1) increasing by 1.18% in HYP, 0.23% in STTC, 0.52% in CD, and 0.33% in MI. However, a significant reduction in redundancy may result in the loss of essential clinical information for classification, as observed in scenarios involving only 3 or 1 leads. Conclusions When diagnosing pathologies with systems featuring fewer leads, its combinations should aim for maximum orthogonality to reduce redundancy while preserving unique information. By strategically selecting a set of leads with reduced input redundancy, the effectiveness of the standard 12-lead ECG can be improved, thereby enhancing the utility of such continuous monitoring systems for automated diagnosis and also decreasing training and prediction times.