Objective This study aimed to evaluate microbial contamination of contact lenses (CL) and their accessories among asymptomatic lens users and identify behavioral risk factors that might exacerbate the said contamination. Methodology Ninety-five asymptomatic soft CL users were recruited. In total, 380 samples were collected from the inner surface of lenses, the base of lens cases, the tip of the multipurpose solution bottle, and the solution itself. All swabs with samples were inoculated onto Columbia 5% sheep blood agar, MacConkey agar, Pseudomonas agar with cetrimide, and Sabouraud dextrose agar. Blood agar, MacConkey agar, and Pseudomonas agar with cetrimide were incubated at 37 °C for 24-48 hours. Fungal growth was investigated on Sabouraud dextrose agar, incubated at 25 °C, and examined daily for three weeks. Microscopic examination, culture-based methods, and biochemical tests were used to identify isolated microorganisms. A self-administered questionnaire on compliance with care and hygiene procedures was completed by each participant. Results The overall microbial contamination of tested samples was 38.7%. The most frequently contaminated items were lens cases (59, 62.1%), followed by bottles (44, 46.3%) and lenses (35, 36.8%). Meanwhile, the lowest incidence of contamination was seen in lens multipurpose solutions (9, 9.5%). The predominant microorganisms recovered were Coagulase-negative Staphylococci (CoNS) (94, 64%) and Gram-positive rods (29, 19.7%). Other identified potential pathogens were Staphylococcus aureus(11, 7.5%), Pseudomonas aeruginosa(5, 3.4%), Escherichia coli(1, 0.7%), andCandida albicans(2, 1.4%). The questionnaire revealed that contact lens users aged 18 to 20 showed a lack of compliance with proper hygienic care for contact lens maintenance. Risk factors such as male gender, smoking, showering, or swimming while wearing CL were related to microbiological contamination in at least one of the samples (P > 0.05). Conclusions The highest degree of contamination with highly virulent pathogens was determined in lens cases owing to insufficient lens care practices among study participants. Noncompliance with the lens cleaning procedures can lead to microbial colonization of the lens and its accessories, prompting inflammatory events in the eyes in the future.