COVID-19 has greatly influenced the worldwide scientific community to shift its focus towards computational and multidisciplinary approaches to meet the needs around the world. In contrast, a downfall in women computational biologists was significant... Read More
Computational Biology Research Articles
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6104 Articles
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Post-COVID-19 Pandemic Impact Assessment of Bioinformatics and Women Bioinformaticians: A Realm of Possibilities or Gloom-Ridden
- The Open COVID Journal
- VOL. 2
on Sep 21, 2022
Clustered tree regression to learn protein energy change with mutated amino acid
- Briefings in Bioinformatics
on Sep 17, 2022
Abstract Accurate and effective prediction of mutation-induced protein energy change remains a great challenge and of great interest in computational biology. However, high resource consumption and insufficient structural information o... Read More
Climatic clustering and longitudinal analysis with impacts on food, bioenergy, and pandemics
- Phytobiomes Journal
on Sep 15, 2022
Predicted growth in world population will put unparalleled stress on the need for sustainable energy and global food production, as well as increase the likelihood of future pandemics. In this work, we identify high-resolution environmental zones in... Read More
BDEtools: A MATLAB Package for Boolean Delay Equation Modeling
- Journal of Computational Biology
on Sep 13, 2022
Boolean Delay Equations (BDEs) can simulate surprisingly complex behavior, despite their relative simplicity. In addition to steady-state dynamics, BDEs can also generate periodic and quasiperiodic oscillations, m:n frequency locking, and even chaos.... Read More
Artificial Intelligence Applied to Medical Imaging and Computational Biology
- Applied Sciences
- VOL. 12
on Sep 8, 2022
The Special Issue “Artificial Intelligence Applied to Medical Imaging and Computational Biology” of the Applied Sciences Journal has been curated from February 2021 to May 2022, which covered the state-of-the-art and novel algorithms and applications... Read More
Protein Function Analysis through Machine Learning
- Biomolecules
- VOL. 12
on Sep 6, 2022
Machine learning (ML) has been an important arsenal in computational biology used to elucidate protein function for decades. With the recent burgeoning of novel ML methods and applications, new ML approaches have been incorporated into many areas of ... Read More
Computer-Aided Drug Design Boosts RAS Inhibitor Discovery
- Molecules
- VOL. 27
on Sep 5, 2022
The Rat Sarcoma (RAS) family (NRAS, HRAS, and KRAS) is endowed with GTPase activity to regulate various signaling pathways in ubiquitous animal cells. As proto-oncogenes, RAS mutations can maintain activation, leading to the growth and proliferation ... Read More
Computer-Aided Drug Design Boosts RAS Inhibitor Discovery.
- Molecules (Basel, Switzerland)
- VOL. 27
on Sep 5, 2022
The Rat Sarcoma (RAS) family (NRAS, HRAS, and KRAS) is endowed with GTPase activity to regulate various signaling pathways in ubiquitous animal cells. As proto-oncogenes, RAS mutations can maintain activation, leading to the growth and proliferation ... Read More
Plant Melatonin: Regulatory and Protective Role
- Horticulturae
- VOL. 8
on Sep 3, 2022
Melatonin is an antioxidant that is widely distributed in plants and animals. It is a conservative molecule. In early studies, scientists often used isolation and identification techniques to observe whether the endogenous melatonin cycle in plants w... Read More
Translational organoid technology – the convergence of chemical, mechanical, and computational biology
- Trends in Biotechnology
- VOL. 40
on Sep 1, 2022
Successful clinical translation of organoid technology requires insights that extend beyond biology and biochemistry, notably from the fields of mechanical and computational biology. This review highlights recent advances in the organoid field that c... Read More
ECCB2022: the 21st European Conference on Computational Biology
- Bioinformatics
- VOL. 38
on Sep 1, 2022
Can plant-derived anti-HIV compounds be used in COVID-19 cases?
- Medical Hypotheses
- VOL. 166
on Sep 1, 2022
People living with HIV are more exposed to the adverse health effects of the worldwide COVID-19 pandemic. The pandemic's health and social repercussions may promote drug abuse and inadequate HIV management among this demographic. The coronavirus pand... Read More
An insight in Salmonella typhi associated autoimmunity candidates' prediction by molecular mimicry
- Computers in Biology and Medicine
- VOL. 148
on Sep 1, 2022
Autoimmune diseases develop when the immune system targets healthy cells and tissues of an individual. In developing countries, S. typhi (a gram-negative pathogenic bacteria) remains a major public health issue. This study aimed to employ bioinformat... Read More
Origin of novel coronavirus causing COVID-19: A computational biology study using artificial intelligence
- Machine Learning with Applications
- VOL. 9
on Sep 1, 2022
Origin of the COVID-19 virus (SARS-CoV-2) has been intensely debated in the scientific community since the first infected cases were detected in December 2019. The disease has caused a global pandemic, leading to deaths of thousands of people across ... Read More
Survey of extracellular communication of systemic and organ-specific inflammatory responses through cell free messenger RNA profiling in mice
- eBioMedicine
- VOL. 83
on Sep 1, 2022
Inflammatory and immune responses are essential and dynamic biological processes that protect the body against acute and chronic adverse stimuli. While conventional protein markers have been used to evaluate systemic inflammatory response, the immuno... Read More
Investigation of the Defective Growth Pattern and Multidrug Resistance in a Clinical Isolate of Candida glabrata Using Whole-Genome Sequencing and Computational Biology Applications
- Microbiology Spectrum
- VOL. 10
on Aug 31, 2022
In this study, a cholesterol-dependent C. glabrata clinical isolate that confers azole and AmB resistance was investigated using artificial intelligence (AI) technologies and cloud computing applications. This is ... Read More
Identification of natural inhibitors to inhibit C. acnes lipase through docking and simulation studies
- Journal of Molecular Modeling
- VOL. 28
on Aug 30, 2022
Acne vulgaris is a common skin disease affecting 80-90% of teenagers worldwide. C. acnes producing lipases are the main virulence factor that catalyzes sebum lipid into free fatty acid that is used for C. acnes growth. Recently, computational biology... Read More
Survey of extracellular communication of systemic and organ-specific inflammatory responses through cell free messenger RNA profiling in mice.
- EBioMedicine
- VOL. 83
on Aug 30, 2022
Inflammatory and immune responses are essential and dynamic biological processes that protect the body against acute and chronic adverse stimuli. While conventional protein markers have been used to evaluate systemic inflammatory response, the immuno... Read More
Design of a novel multi-epitope vaccine candidate against hepatitis C virus using structural and nonstructural proteins: An immunoinformatics approach
- PLOS ONE
- VOL. 17
on Aug 30, 2022
Hepatitis C virus (HCV) infects the liver and causes chronic infection. Several mutations in the viral genome have been associated with drug resistance development. Currently, there is no approved vaccine against the HCV. The employment of computatio... Read More
Computational Biology of BRCA2 in Male Breast Cancer, through Prediction of Probable nsSNPs, and Hit Identification.
- ACS omega
- VOL. 7
on Aug 30, 2022
Male breast cancer (MBC) is a relatively rare disease, but emerging data recommend the development of novel therapeutics considering its alarming threats. Compared to female breast cancer (FBC), MBC is reportedly associated with inferior outcomes (po... Read More