Bringing machine learning to research on intellectual and developmental disabilities: taking inspiration from neurological diseases. Abstract Intellectual and Developmental Disabilities (IDDs), such as Down syndrome, Fragile X syndrome, Rett syndrome... Read More
Computational Biology Research Articles
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Bringing machine learning to research on intellectual and developmental disabilities: taking inspiration from neurological diseases.
- Journal of neurodevelopmental disorders
- VOL. 14
on May 2, 2022
Phytomedicines explored under in vitro and in silico studies against coronavirus: An opportunity to develop traditional medicines.
- South African journal of botany : official journal of the South African Association of Botanists = Suid-Afrikaanse tydskrif vir plantkunde : amptelike tydskrif van die Suid-Afrikaanse Genootskap van Plantkundiges
on May 2, 2022
Phytomedicines explored under in vitro and in silico studies against coronavirus: An opportunity to develop traditional medicines. Abstract The widespread COVID-19 pandemic, caused by novel coronavirus SARS-CoV-2, has emanated as one of the most life... Read More
Mapping the epithelial-immune cell interactome upon infection in the gut and the upper airways.
- NPJ systems biology and applications
- VOL. 8
on May 2, 2022
Mapping the epithelial-immune cell interactome upon infection in the gut and the upper airways. Abstract Increasing evidence points towards the key role of the epithelium in the systemic and over-activated immune response to viral infection, includin... Read More
PyProtModel: An easy to use GUI for comparative protein modeling
- Journal of molecular graphics & modelling
- VOL. 112
on May 1, 2022
Abstract A deep insight into the 3D structures of the proteins is essential to understand their functions and will be helpful in drug design and making decisions for the treatment of diseases. The 3D structure for less than one-thousandth of the prot... Read More
String Diagram Rewrite Theory I: Rewriting with Frobenius Structure
- Journal of the ACM
- VOL. 69
on Apr 30, 2022
String Diagram Rewrite Theory I: Rewriting with Frobenius Structure Abstract String diagrams are a powerful and intuitive graphical syntax, originating in theoretical physics and later formalised in the context of symmetric monoidal categories. In re... Read More
Integration of machine learning with computational structural biology of plants.
- The Biochemical journal
- VOL. 479
on Apr 29, 2022
Integration of machine learning with computational structural biology of plants. Abstract Computational structural biology of proteins has developed rapidly in recent decades with the development of new computational tools and the advancement of comp... Read More
Leveraging big data bioinformatics approaches to extract knowledge from Staphylococcus aureus public omics data.
- Critical reviews in microbiology
on Apr 25, 2022
Leveraging big data bioinformatics approaches to extract knowledge from Staphylococcus aureus public omics data. Abstract Staphylococcus aureus is a notorious pathogen posing challenges in the medical industry due to drug resistance and biofilm forma... Read More
New insights into tuft cell formation: Implications for structure-function relationships.
- Current opinion in cell biology
- VOL. 76
on Apr 22, 2022
New insights into tuft cell formation: Implications for structure-function relationships. Abstract Tuft cells are sentinel chemosensory cells that monitor the lumen of hollow organs for noxious or infectious stimuli and respond with disease - and tis... Read More
ScSGL: Kernelized Signed Graph Learning for Single-Cell Gene Regulatory Network Inference
- Bioinformatics
on Apr 22, 2022
scSGL: Kernelized Signed Graph Learning for Single-Cell Gene Regulatory Network Inference Abstract AbstractMotivationElucidating the topology of gene regulatory networks (GRNs) from large single-cell RNA sequencing (scRNAseq) datasets, while effectiv... Read More
ScSGL: Kernelized Signed Graph Learning for Single-Cell Gene Regulatory Network Inference.
- Bioinformatics (Oxford, England)
on Apr 22, 2022
scSGL: Kernelized Signed Graph Learning for Single-Cell Gene Regulatory Network Inference. Abstract Elucidating the topology of gene regulatory networks (GRNs) from large single-cell RNA sequencing (scRNAseq) datasets, while effectively capturing its... Read More
Empirical Study of Protein Feature Representation on Deep Belief Networks Trained with Small Data for Secondary Structure Prediction.
- IEEE/ACM transactions on computational biology and bioinformatics
- VOL. PP
on Apr 19, 2022
Empirical Study of Protein Feature Representation on Deep Belief Networks Trained with Small Data for Secondary Structure Prediction. Abstract Protein secondary structure (SS) prediction is a classic problem of computational biology and is widely use... Read More
Chemical Reaction Networks’ Programming for Solving Equations
- Current Issues in Molecular Biology
- VOL. 44
on Apr 14, 2022
Chemical Reaction Networks ’ Programming for Solving Equations Abstract The computational ability of the chemical reaction networks (CRNs) using DNA as the substrate has been verified previously. To solve more complex computational problems and perfo... Read More
Network pharmacology and in vitro testing of Theobroma cacao extract’s antioxidative activity and its effects on cancer cell survival
- PLOS ONE
- VOL. 17
on Apr 14, 2022
Network pharmacology and in vitro testing of Theobroma cacao extract ’s antioxidative activity and its effects on cancer cell survival Abstract Theobroma cacao L. is a commercially important food/beverage and is used as traditional medicine worldwide... Read More
Network pharmacology and in vitro testing of Theobroma cacao extract’s antioxidative activity and its effects on cancer cell survival
- PloS one
- VOL. 17
on Apr 14, 2022
Network pharmacology and in vitro testing of Theobroma cacao extract ’s antioxidative activity and its effects on cancer cell survival Abstract Theobroma cacao L. is a commercially important food/beverage and is used as traditional medicine worldwide... Read More
Continuous-time quantum walk based centrality testing on weighted graphs
- Scientific Reports
- VOL. 12
on Apr 9, 2022
Continuous-time quantum walk based centrality testing on weighted graphs Abstract Centrality measure is an essential tool in network analysis and widely used in the domain of computer science, biology and sociology. Taking advantage of the speedup of... Read More
A Pyroptosis-Related Gene Signature Predicts Prognosis and Immune Microenvironment for Breast Cancer Based on Computational Biology Techniques
- Frontiers in Genetics
- VOL. 13
on Apr 7, 2022
A Pyroptosis-Related Gene Signature Predicts Prognosis and Immune Microenvironment for Breast Cancer Based on Computational Biology Techniques Abstract Breast cancer (BC) is a malignant tumor with high morbidity and mortality, which seriously threate... Read More
Nanotechnological interventions of the microbiome as a next-generation antimicrobial therapy.
- The Science of the total environment
on Apr 5, 2022
Nanotechnological interventions of the microbiome as a next-generation antimicrobial therapy. Abstract The rise of antimicrobial resistance (AMR) impacts public health due to the diminished potency of existing antibiotics. The microbiome plays an imp... Read More
Structural validation and assessment of AlphaFold2 predictions for centrosomal and centriolar proteins and their complexes
- Communications biology
- VOL. 5
on Apr 5, 2022
Structural validation and assessment of AlphaFold2 predictions for centrosomal and centriolar proteins and their complexes Abstract Obtaining the high-resolution structures of proteins and their complexes is a crucial aspect of understanding the mech... Read More
Flukebook: an open-source AI platform for cetacean photo identification
- Mammalian Biology
on Apr 5, 2022
Abstract etermining which species are at greatest risk, where they are most vulnerable, and what are the trajectories of their communities and populations is critical for conservation and management. Globally distributed, wide-ranging whales and dolp... Read More
Mulberrin inhibits Botrytis cinerea for strawberry storage by interfering with the bioactivity of 14α-demethylase (CYP51).
- Food & function
- VOL. 13
on Apr 4, 2022
Mulberrin inhibits Botrytis cinerea for strawberry storage by interfering with the bioactivity of 14α-demethylase (CYP51). Abstract Currently, chemical agents hold great promise in preventing and combating Botrytis cinerea. However, the antifungal me... Read More