This article explores the mechanical analysis and optimization problems of concrete structures based on the Advanced Finite Element Method. By integrating advanced numerical techniques with practical engineering cases, this study aims to improve the safety and economy of concrete structure design. Firstly, the paper outlines the limitations of traditional finite element methods in concrete structure analysis, such as insufficient computational accuracy and low computational efficiency. Subsequently, by introducing AFEM, we significantly improved the accuracy and efficiency of the analysis. For example, when simulating a complex bridge structure, AFEM not only reduces the calculation time by about 25%, but also improves the accuracy of stress distribution prediction by more than 10%. In the optimization stage, we utilized the analysis results of AFEM and optimized the material consumption, cross-sectional dimensions, and reinforcement parameters of concrete structures through multi-objective optimization algorithms. A comprehensive data analysis underscores that the optimized concrete structure triumphantly meets all safety performance criteria while achieving a remarkable 12% reduction in material usage. This substantial material savings translates into a substantial 8% decrease in overall construction costs, significantly bolstering the project’s economic feasibility. Moreover, these cost savings not only amplify the project’s profitability but also play a pivotal role in enhancing the structure’s longevity and durability, thereby contributing to its sustainable performance over its entire service life. Furthermore, we delved into the capability of AFEM in simulating intricate phenomena such as the nonlinear behavior of concrete materials, crack propagation patterns, and the intricate interactions between steel reinforcements and concrete. These complex mechanical behaviors are crucial for the safety and stability of structures, and AFEM provides more comprehensive and accurate references for structural design by accurately simulating these behaviors. This article conducts in-depth research on the mechanical analysis and optimization of concrete structures based on AFEM, and demonstrates the significant advantages of AFEM in improving structural safety and economy through specific data. These research results not only provide new theoretical support and practical tools for concrete structure design, but also provide valuable references for future research and application in related fields.