Caribbean Sea Research Articles

Morphology and molecular evidence reveal hidden diversity among snapping shrimp of the Alpheus obesomanus group (Decapoda: Alpheidae) with the description of a new species from Brazil

The snapping shrimp family Alpheidae Rafinesque, 1815 includes numerous species, most of which present controversial geographical distributions. The disjunct distribution of Alpheus simus Guérin-Méneville, 1856 in the western Atlantic, from Florida to the south of the Caribbean Sea and then from Rio Grande do Norte to Bahia in Brazil, suggests that Brazilian material may belong to an undescribed species. The examination of specimens previously identified as A. simus revealed the distinct morphology of material from Brazil, resulting in the description of a new species based on morphological and molecular evidence. The specimens were collected from fragments of fire coral at the Parque Municipal Marinho do Recife de Fora, Porto Seguro, Bahia, Brazil. Alpheus coralvivo sp. nov. belongs to the A. obesomanus group and is morphologically similar to A. simus (northwestern Atlantic) and A. saxidomus Holthuis, 1980 (eastern Pacific), differing mainly in the stylocerite and scaphocerite lengths and in the large gap between the cephalothorax and pleuron of the first pleonal segment. Molecular analysis using the mitochondrial cytochrome oxidase subunit I gene support the existence of the new species.

Combining Morphological Characteristics and DNA Barcoding Techniques Confirm Sea Urchins of the Genus Echinometra (Echinodermata: Echinoidea) in Marine Habitat Located at Extreme Regions of the Caribbean Sea.

Echinometra spp. are pantropical echinoids found in benthic marine habitat throughout the Caribbean, Atlantic, and Indo-West Pacific oceanic regions. Currently, morphology and molecular data are sparse for echinoids observed along the northeastern coast of Toco, Trinidad, where they are relatively common. Additionally, accurate species identity for Echinometra spp. remains dynamic at both northernmost and southernmost parts of the Caribbean Sea. Although distribution of sea urchins in the genus Echinometra have extensively been studied throughout the Atlantic and Indo-West Pacific, information on its range of distribution at the edge of the Caribbean Sea is lacking. In this study, the mitochondrial Cytochrome c Oxidase subunit I (mt COI) gene was amplified using polymerase chain reaction, then sequenced. Based on successfully obtained gene sequences for 581 base pairs, the echinoid species Echinometra lucunter and Echinometra viridis were identified for black and red color morphotypes from Trinidad (n=23) and Key Largo, Florida (n=6), respectively. Furthermore, these specimens were genetically identical to species identified in other studies for Puerto Rico, Panamá, Honduras, and Belize. Although morphological variations, such as spine and test color occur throughout Echinometra spp., molecular identification using the barcoding technique confirmed E. lucunter color morphs for the first time in Trinidad. Since the status of E. lucunter populations, specifically at the most northern and southern regions of the Caribbean Sea is dynamic, further studies using gene markers are essential in determining species distribution, in light of current trends in climate change.

Western Atlantic regionalization based on distributional congruence patterns of Scleractinian corals

Coral reefs represent a source of ecosystem services relevant for the permanence of coastal human communities. Given the importance of zooxanthellate scleractinian corals (ZSC) in these ecosystems, information on the presence and distribution of this group is valuable for studying the biodiversity and establishing management strategies to ensure their permanence over time. Despite being a highly studied biological group in the Western Atlantic, records of ZSC presence are heterogeneous and are distributed mainly in the Caribbean Sea. One way to analyze the distribution of biota at large spatial scales is through biogeographic regionalizations. To identify the distribution patterns of ZSC in the Western Atlantic and propose a biogeographic regionalization based in this biological group, we performed a Parsimony Analysis of Endemism (PAE) at ecoregion scale using Species Distribution Models (SDM) to fill the gaps in data on the distribution of these corals. Through these analyses, we identified the presence of two main biogeographic provinces: Northwestern Atlantic Tropical Province and Tropical Southwestern Atlantic. According to Jaccard Index, this regionalization is highly similar to those performed with multitaxa by other authors, which demonstrates that for these purposes this taxa can be considered as a surrogate group. In terms of management, this study highlights the importance of establishing preservation and conservation measures that address this biological group, in order to guarantee both the permanence of other taxa and the ecosystem goods and services they provide.

Isolation of Caribbean Ciguatoxin-5 (C-CTX5) and confirmation of its structure by NMR spectroscopy

Ciguatera poisoning occurs throughout subtropical and tropical regions globally. The Virgin Islands in the Caribbean Sea is a known hyperendemic region for ciguatera and has been associated with Caribbean ciguatoxin (C-CTX) contamination in fish. An algal C-CTX (C-CTX5) was identified in Gambierdiscus silvae and G. caribeaus isolated from benthic algal samples collected in waters south of St. Thomas, US Virgin Islands. The highest CTX-producing isolate, G. silvae 1602 SH-6, was grown at large-scale to isolate sufficient C-CTX5 for structural confirmation by NMR spectroscopy. A series of orthogonal extraction and fractionation procedures resulted in purification of approximately 40 μg of C-CTX5, as estimated by quantitative NMR. A suite of 1D and 2D NMR experiments were acquired that verified the structure originally proposed for C-CTX5. The structural confirmation and successful isolation of C-CTX5 opens the way for work on the stability, toxicology and biotransformation of C-CTXs, as well as for the production of quantitative reference materials for analytical method development and validation. The strategies developed for purification of C-CTX5 may also apply to isolation and purification of CTXs from the Pacific Ocean and other regions.

A global map of species at risk of extinction due to natural hazards

An often-overlooked question of the biodiversity crisis is how natural hazards contribute to species extinction risk. To address this issue, we explored how four natural hazards, earthquakes, hurricanes, tsunamis, and volcanoes, overlapped with the distribution ranges of amphibians, birds, mammals, and reptiles that have either narrow distributions or populations with few mature individuals. To assess which species are at risk from these natural hazards, we combined the frequency and magnitude of each natural hazard to estimate their impact. We considered species at risk if they overlapped with regions where any of the four natural hazards historically occurred (n = 3,722). Those species with at least a quarter of their range subjected to a high relative impact were considered at high risk (n = 2,001) of extinction due to natural hazards. In total, 834 reptiles, 617 amphibians, 302 birds, and 248 mammals were at high risk and they were mainly distributed on islands and in the tropics. Hurricanes (n = 983) and earthquakes (n = 868) affected most species, while tsunamis (n = 272), and volcanoes (n = 171) affected considerably fewer. The region with the highest number of species at high risk was the Pacific Ring of Fire, especially due to volcanoes, earthquakes, and tsunamis, while hurricane-related high-risk species were concentrated in the Caribbean Sea, Gulf of Mexico, and northwestern Pacific Ocean. Our study provides important information regarding the species at risk due to natural hazards and can help guide conservation attention and efforts to safeguard their survival.

Monitoring hydrodynamic vessel performance by incremental machine learning using in-service data

ABSTRACT An adaptive machine learning framework is established for an implicit determination of the performance degradation of a ship due to marine growth, i.e. biofouling. The framework is applied in a case study considering telemetry data of a cruise ship operating predominantly in the Caribbean Sea. The dataset encompasses seven years including three dry-docking intervals and several in-water cleaning events. The COVID-19 period receives special focus due to the drastic change in the operational profile. A main outcome of the study is a comparison of the derived performance estimate to the corresponding results of the industry standard ISO 19030. Additional aspects of the present study include the use of special regularization techniques for incremental machine learning and the increase of transparency through the implementation of prediction intervals indicating model uncertainty. Overall, it is found that the developed machine learning framework shows good agreement with the industry standard underlining its plausibility.

A revision of the genus Wrangelia (Wrangeliaceae, Ceramiales) in Bermuda resolves six new species including W. ryancraigii from the mesophotic zone.

Four species of the genus Wrangelia are presently known from the western Atlantic Ocean: W. argus, W. bicuspidata, W. penicillata, and W. gordoniae, with the first three historically being reported from Bermuda. Morphological and molecular barcode (COI-5P) and phylogenetic analyses used in this study (SSU, LSU, rbcL) indicated eight species groupings of Wrangelia in Bermuda, excluding two of the historically recognized species, retaining only W. argus while adding seven new species, of which six are formally described. What had been historically reported as W. penicillata from Bermuda was shown to be distinct from Mediterranean Sea specimens (type locality) and was shown to be a mixture of W. hesperia sp. nov. and W. incrassata sp. nov. Along with these two, three other new species (W. laxa sp. nov., W. ryancraigii sp. nov., and W. secundiramea sp. nov.) have complete rhizoidal cortication tightly covering axial cells of indeterminate axes below the apices, distinguishing them from the two local incompletely corticated congeners W.argus and W. abscondita sp. nov., the latter a morphologically cryptic sister species with W. bicuspidata from the Caribbean Sea. Only one of the new species, W. ryancraigii, has thus far been observed in the mesophotic zone off the Bermuda platform, and it is morphologically cryptic with the euphotic zone's W. laxa.

The 2022 ICJ Judgment in Nicaragua v. Colombia: Towards a Theory of Exclusivity in Allocating Rights and Jurisdiction between the Coastal and Other States?

Abstract In Alleged Violations of Sovereign Rights and Maritime Spaces in the Caribbean Sea (Nicaragua v. Colombia), the International Court of Justice delves into the matter of exclusivity when assessing alleged violations committed by foreign States within an Exclusive Economic Zone. Additionally, the Court examines the legality of legislative acts concerning the contiguous zone and outlines criteria for the drawing of straight baselines. The Court’s aim seems to be establishing a comprehensive theory of exclusivity, seeking to allocate and balance the rights and jurisdiction of coastal States and other States involved. In this context, it becomes apparent that the abstract notion of freedom of navigation imposes limitations on coastal States, preventing them from enacting legislation that expands the scope of their jurisdiction or adopts a liberal interpretation of permissible conditions within relevant regulatory frameworks. The implications of this theory for the evolution of the legal order pertaining to maritime spaces warrant significant attention.

Anticancer Activity of Sargassum fluitans Extracts in Different Cancer Cells.

The arrival of large quantities of Sargassum in the Mexican Caribbean Sea has generated major environmental, health and economic problems. Although Sargassum has been used in the generation of some commercial products, few studies have described its possible applications as a source of compounds with anticancer activity. This study aimed to evaluate the antiproliferative effects of different Sargassum extracts on various cancer cell lines. Furthermore, LC/QTOF-MS was used to identify the compounds related to the antiproliferative effect. First, determination of the seaweed was performed, and dichloromethane, chloroform and methanol extracts were obtained. The extracts were evaluated for their antiproliferative effects by MTT in breast (MDAMB- 231 and MCF-7), prostate (DU-145), lung (A549) and cervical (SiHa) cancer cell lines. Finally, LC/QTOFMS identified the compounds related to the antiproliferative effect. The authentication showed Sargassum fluitans as the predominant species. The extracts of dichloromethane and chloroform showed an antiproliferative effect. Interestingly, the fractionation of the chloroform extract showed two fractions (FC1 and FC2) with antiproliferative activity in MDA-MB-231, SiHa and A549 cancer cell lines. On the other hand, three fractions of dichloromethane extract (FD1, FD4 and FD5) also showed antiproliferative effects in the MDA-MB-231, MCF-7, SiHa and DU-145 cancer cell lines. Furthermore, LC/QTOF-MS revealed the presence of eight major compounds in FC2. Three compounds with evidence of anticancer activity were identified (D-linalool-3-glucoside, (3R,4S,6E,10Z)-3,4,7,11-tetramethyl-6,10-tridecadienal and alpha-tocotrienol). These findings showed that Sargassum fluitans extracts are a possible source of therapeutic agents against cancer and could act as scaffolds for new drug discovery.

Continuous Sargassum monitoring across the Caribbean Sea and Central Atlantic using multi-sensor satellite observations

Recurrent transnational Sargassum blooms across the Caribbean Sea and Atlantic Ocean have received growing attention. Different multispectral sensors, including Moderate Resolution Imaging Spectroradiometer (MODIS), Visible Infrared Imager Radiometer Suite (VIIRS), and Ocean and Land Color Instrument (OLCI), have been used to map their distributions. However, the synergistic use of multi-sensor observations for high temporal resolution Sargassum monitoring is lacking. Here, by combining MODIS (on Aqua and Terra), VIIRS (on JPSS1 and SNPP), and OLCI (on Sentinel-3A and -3B) observations, 3-day mean Sargassum distributions were mapped across the Caribbean Sea and Central Atlantic. The Sargassum biomass densities were derived using the sensor-specific Alternative Floating Algae Index (AFAI)-biomass model, and the consistency between the six sensors was examined using MODIS Aqua as the reference sensor. Comparison of the Sargassum biomass derived from different sensors shows that they have strong linear correlations (R2 ≥ 0.95), demonstrating high consistency and continuity between the six-sensor observations. On average, the combined six-sensor datasets provide ∼1.6 times more valid observations compared to the MODIS-only dataset in 2021, enabling the generation of the 0.5° 3-day mean products over ∼90% of the study region. Such 0.5° 3-day mean products detected ∼10-20% more biomass in the bloom peak month (June 2021) compared to the monthly mean counterpart. Increasing the spatial resolution to 0.1°, the 3-day mean products can continuously monitor Sargassum dynamics with eddies and tropical cyclones, which cannot be well captured by single sensors. This study highlights that combining multiple polar-orbiting satellite observations can achieve 3-day gap-free monitoring of floating macroalgae dynamics in the Caribbean Sea and tropical Atlantic, thus facilitating the analyses of the bloom response to different environmental conditions and the prediction of future bloom events.

Probing the Antiplasmodial Properties of Plakortinic Acids C and D: An Uncommon Pair of Marine Peroxide-Polyketides Isolated from a Two-Sponge Association of Plakortis symbiotica and Xetospongia deweerdtae Collected near Puerto Rico.

Plakortinic acids C (1) and D (2), an unseparable pair of endoperoxide polyketides isolated and purified from the symbiotic association of Caribbean Sea sponges Plakortis symbiotica-Xestospongia deweerdtae, underwent in vitro evaluation for antiplasmodial activity against the malaria parasite Plasmodium berghei using a drug luminescence assay. Initial screening at 10 µM revealed 50% in vitro parasite growth inhibition. The title compounds displayed antiplasmodial activity with an EC50 of 5.3 µM toward P. berghei parasites. The lytic activity against erythrocytes was assessed through an erythrocyte cell lysis assay, which showed non-lytic activity at lower concentrations ranging from 1.95 to 3.91 µM. The antiplasmodial activity and the absence of hemolytic activity support the potential of plakortinic acids C (1) and D (2) as promising lead compounds. Moreover, drug-likeness (ADMET) properties assessed through the pkCSM server predicted high intestinal absorption, hepatic metabolism, and volume of distribution, indicating favorable pharmacokinetic profiles for oral administration. These findings suggest the potential suitability of these metabolites for further investigations of antiplasmodial activity in multiple parasitic stages in the mosquito and Plasmodium falciparum. Notably, this study represents the first report of a marine natural product exhibiting the unique 7,8-dioxatricyclo[4.2.2.02,5]dec-9-ene motif being evaluated against malaria.

Evaluation of WRF model configurations for dynamic downscaling of tropical cyclones activity over the North Atlantic basin for Lagrangian moisture tracking analysis in future climate

This study assessed five well-established physics suites of the Weather Research and Forecasting (WRF) model in operational forecasting systems in the North Atlantic (NATL) basin or from previous sensitive experiments for dynamic downscaling tropical cyclone (TC) activity. We performed long-term simulations for the 2020 TC season in the NATL and compared the WRF tracks against the HURDAT2 dataset from the US National Hurricane Center. Among the tested configurations, the analysis revealed that the Kain-Fritsch, Purdue Lin, BouLac and revised MM5 schemes for cumulus, microphysics, planetary boundary layer and surface layer, respectively (hereafter WT), outperformed all four others in terms of TC frequency, track density and intensity and showed good performance in the cyclone accumulated energy and TC landfalling locations. In addition, WT well-captured the spatial distribution of accumulated TC precipitation and moisture uptake patterns, although it overestimated the precipitation maxima. Likewise, it agreed on the relative moisture contribution from fixed moisture sources (i.e., Gulf of Mexico, Caribbean Sea, tropical NATL, and western NATL) in the NATL basin. Overall, this study highlighted the high potential of using the WT physics suite in WRF for downscaling TC activity over the NATL basin, which will be useful for TC Lagrangian moisture sources analysis in future climate.

Kallopterolides A-I, a New Subclass of seco-Diterpenes Isolated from the Southwestern Caribbean Sea Plume Antillogorgia kallos.

Kallopterolides A-I (1-9), a family of nine diterpenoids possessing either a cleaved pseudopterane or a severed cembrane skeleton, along with several known compounds were isolated from the Caribbean Sea plume Antillogorgia kallos. The structures and relative configurations of 1-9 were characterized by analysis of HR-MS, IR, UV, and NMR spectroscopic data in addition to computational methods and side-by-side comparisons with published NMR data of related congeners. An investigation was conducted as to the potential of the kallopterolides as plausible in vitro anti-inflammatory, antiprotozoal, and antituberculosis agents.

The Complete Genome Sequences of 7 Hypoplectrus species (Serranidae, Perciformes).

Species in the genus Hypoplectrus are found primarily in coral reefs in the Caribbean Sea and the Gulf of Mexico, particularly around Florida and the Bahamas. They are a popular choice for hobbyist saltwater aquariums. Members of this genus are simultaneous hermaphrodites, as they have both male and female sexual organs at the same time as an adult. We present the genome sequences of 7 species of Hypoplectrus. Raw read data and assembled genomes are available in Genbank.

The State of Knowledge of CCA Diversity in the Caribbean Coral Reefs

Crustose coralline algae (CCA) are a diverse and ecologically important species found in most of the world’s oceans. The current lack of taxonomic knowledge and relative abundance compromises our ability to predict species diversity numbers and, thus, their ecological roles and impacts on coral reefs. To gather a better understanding of the state of knowledge of crustose coralline algae taxonomy in the Caribbean, 107 different research papers, and other primary and secondary literature were studied; any source with taxonomical information, species identification, or genetic markers for identification was recorded. All Genebank codes were collected and sorted by supposed species marker and then ran through the National Center of Biotechnology Information. The location these genetic markers were gathered from was compared to the natural habitat range of the species, based on the Algaebank habitat description. Of the supposed 83 described species of crustose algae in the Caribbean, based on morphological characteristics, only 24 total were confirmed by DNA markers. This leaves at least 59 species of CCA to be confirmed in the Caribbean Sea with molecular markers. This indicates the importance of DNA barcode survey studies to assess the accurate diversity of this group in the region. With this limited knowledge apparent, it should be seen that a CCAs phylogenetic and taxonomical review must be done. An in-depth assessment should be conducted on CCA collections to identify the Caribbean species correctly and thus know their biodiversity in local habitats.

An analysis of surface waves in the Caribbean Sea based on a high-resolution numerical wave model

Surface waves are extremely important in a large variety of oceanographic applications and thus, the study of their spatiotemporal characteristics remains crucial. This study analyzes waves in the Caribbean Sea (CS) and western Atlantic Ocean (AO) using a high-resolution (HR) Simulating WAves Nearshore model validated with buoy observations and paired with a HR bathymetric dataset from 2010 – 2019. Island sheltering effects are examined but special attention is given to these effects under Hurricane Dorian in The Bahamas using observations from the China-France Oceanographic Satellite. Results illustrate that wave heights within the CS fluctuated with Caribbean Low-Level Jet activity, but a different wave regime exists within the AO. While wind waves overwhelmingly dominate the wave field and this is true even in the AO, surprisingly, the contribution of swell in the central CS was equal to one site in the AO. Possibly, due to interaction with the shallow Nicaraguan Rise, wave heights were strongly (depth-induced) refracted nearly 45°, a feature unseen in previous research using coarse bathymetric datasets. Island sheltering effects were pervasive and were naturally most pronounced under hurricane conditions. Crucially, New Providence in The Bahamas is vulnerable to hurricane-forced waves funneled through the Grand Bahama and Northeastern Providence Channels.

4500-year paleohurricane record from the Western Gulf of Mexico, Coastal Central TX, USA

Texas receives the second-highest number of tropical cyclone (TC) landfalls per year in the United States. At present, long-term TC projections from climate models remain uncertain due to the short and biased nature of Atlantic TC observations. Sediment archives of past storms can help extend the observational record of TC strikes over the past few millennia. When a TC makes landfall along the central Texas coast, coastal downwelling channels and storm currents transport and deposit coarse sediment to a zone of rapid accumulation along the shelf, known as the Texas Mud Blanket (TMB). This “backwash” process results in expansive storm deposits along the shelf, making this region ideal for paleotempestological reconstructions. Here, we present two sediment cores, located approximately 6 km southeast of Matagorda Island (TX), that collectively yield a ∼4500-year paleohurricane record. 210Pb and 137Cs are utilized in conjunction with radiocarbon ages to produce high-resolution Bayesian age models. One-centimeter interval grain size analyses are used to identify TC deposits. Two-centimeter interval X-Ray Fluorescence (XRF) is used as an additional measure to verify depositional mechanisms in this shelf environment. We define an intense paleohurricane event threshold through statistical analysis of mean grain size data. The sediment-derived TC record is correlated to Palmer Drought Severity Index (PDSI) data from Paleo Hydrodynamics Data Assimilation (PHYDA) to bolster our interpretation of the TC record, revealing a coupled relationship between PDSI and TCs since ∼300 yr BP. Over the ∼4500-year period, 24 intense TCs were recorded in the sediment record, yielding a long-term annual landfall probability of ∼0.53%. Additionally, comparisons between other TC records within the Atlantic establish a relationship between enhanced TC activity in the Western Gulf of Mexico (GOM) and TCs formed in the Caribbean Sea.

Insights into the origin of precipitation moisture for tropical cyclones during rapid intensification process

In this study, we identified the moisture sources for the precipitation associated with tropical cyclones (TCs) during the rapid intensification (RI) process from 1980 to 2018 by applying a Lagrangian moisture source diagnostic method. We detected sixteen regions on a global scale for RI events distributed as follows: four in the North Atlantic (NATL), two in the Central and East Pacific Ocean (NEPAC), the North Indian Ocean (NIO) and South Indian Ocean (SIO), and three in the South Pacific Ocean (SPO) and the Western North Pacific Ocean (WNP). The moisture uptake (MU) mostly was from the regions where TCs underwent RI. The Western NATL, tropical NATL, Caribbean Sea, the Gulf of Mexico and the Central America and Mexico landmass supported ∼85.4% of the precipitating moisture in the NATL, while the latter source and the eastern North Pacific Ocean provided the higher amount of moisture in NEPAC (∼84.3%). The Arabian Sea, the Bay of Bengal and the Indian Peninsula were the major moisture sources in NIO, contributing approximately 81.3%. The eastern and western parts of the Indian Ocean supplied most of the atmospheric humidity in SIO (∼83.8%). The combined contributions (∼87.9%) from the western and central SPO and the Coral Sea were notably higher in SPO. Meanwhile, TCs in the WNP basin mostly received moisture from the western North Pacific Ocean, the Philippine Sea and the China Sea, accounting for 80.1%. The remaining moisture support in each basin came from the summed contributions of the remote sources. Overall, RI TCs gained more moisture up to 2500 km from the cyclone centre than those slow intensification (SI) and the total MU was approximately three times higher during RI than SI. Finally, the patterns of the MU differences respond to the typical pathways of moisture transport in each basin.

First record of the kitefin shark, Dalatias licha (Bonnaterre, 1788) from the Guatemalan Caribbean Sea

Deepwater fishing operations occur close to the shore of the Guatemalan Caribbean. In a study to characterize the deepwater species present in the fishing area, the incidental catch of a kitefin shark, Dalatias licha, was recorded at a depth of ~284-334 m, ca. 11 km northeast of El Quetzalito fishing village. The adult female with a total length of 1420 mm had morphological characteristics consistent with D. licha, which was confirmed by molecular methods. First record of D. licha in the western Caribbean region, a species cataloged at risk by the IUCN red list. With this record, the number of shark species known in the Guatemalan Caribbean increases to 25.

New records of Probopyrus pandalicola and Probopyrinella latreuticola (Epicaridea: Bopyridae) from the southern Mexican Caribbean

The ecology, distribution, and taxonomy of bopyrid isopod species are often omitted from studies not systematically addressed to crustaceans. From a wider study of zooplankton in coastal and reef waters of the Mexican Caribbean Sea, two bopyrid species were collected, Probopyrinella latreuticola, attached to the branchial chamber of Latreutes fucorum and Probopyrus pandalicola parasitizing the branchial chamber of Palaemon northropi. For both parasite-host associations, these records represent a new locality and the southernmost record in the Mexican Caribbean. A map and a list of the bopyrid species belonging to Bopyridae recorded in the Mexican Caribbean are provided.