Caribbean Sea Research Articles

Vertical structure of Caribbean deep-reef fishes from the altiphotic to deep-sea boundary

While recent technical breakthroughs have enabled advances in the description of reefs down to 150 m, the structure and depth zonation of deep-reef communities below 150 m remains largely unknown. Here, we present results from over 10 years of deep-reef fish surveys using human-occupied submersibles at four locations across the Caribbean Sea, constituting one of the only continuous reef-fish surveys from 10 to 480 m (1 site) and 40 to 300 m (3 sites). We identify four vertically stratified deep-reef fish communities between 40 and 300 m bordered by an altiphotic (0–10 m) and a deep-sea (300–480 m) community. We found a strong faunal break around 150 m that separates mesophotic and rariphotic zones and secondary breaks at ~ 70 to 90 m and ~ 180 to 200 m subdividing these zones into upper and lower communities. From 300 to 480 m in Roatán, we found a single fish community dominated by deep-sea families, indicating that the lower boundary of the reef-fish realm occurs at 300 m. No differences were found between communities ranging from 20 to 60 m, suggesting that fishes from the lower altiphotic and upper mesophotic form an ecological continuum. While some variability was observed across sites, the overall depth zonation and key species characterizing depth zones were consistent. Most deep-reef species observed were depth specialists restricted to a single depth zone, but many shallow-reef species extended down to mesophotic depths. Depth segregation among species of a genus was found across ten reef-fish genera and likely constitutes one of the mechanisms driving community distinctiveness and thereby fish diversity across depths.

Predicting bathymetry using multisource differential marine geodetic data with multilayer perceptron neural network

ABSTRACT We propose a method for enhancing the accuracy of bathymetry models based on a multilayer perceptron (MLP) neural network that integrates the differences in multisource marine geodetic data (MMGD) (longitude, latitude, reference bathymetry, slope, the meridional and prime components of vertical deflection, gravity anomaly, vertical gravity gradient, and mean dynamic topography). First, we use the MMGD differences between the shipborne sounding control points within 8′ × 8′ grid points and shipborne sounding control points as input data, as well as the differences between the topo_24.1 model and the measured bathymetric values at the control points as output data to train the MLP model. Second, we feed the input data from the central point of a 1′ × 1′ grid into the MLP model to obtain predictions, and then use the topo_24.1 model to recover the predicted bathymetry at the prediction point. We focus on the Caribbean Sea, and construct a Caribbean Bathymetric Chart of the Oceans (CBCO1) model using MLP neural network. The reliability of MMGD, a CBCO2 model using MMGD, and the reliability and effectiveness of the overall method are demonstrated through comparisons with the CBCO2, GEBCO_2022, topo_24.1, DTU18 models at the checkpoints.

Halophila stipulacea: A Comprehensive Review of Its Phytochemical Composition and Pharmacological Activities.

Halophila stipulacea (Forsskål and Niebuhr) Ascherson is a small marine seagrass that belongs to the Hydrocharitaceae family. It is native to the Red Sea, Persian Gulf, and Indian Ocean and has successfully invaded the Mediterranean and Caribbean Seas. This article summarizes the pharmacological activities and phytochemical content of H. stipulacea, along with its botanical and ecological characteristics. Studies have shown that H. stipulacea is rich in polyphenols and terpenoids. Additionally, it is rich in proteins, lipids, and carbohydrates, contributing to its nutritional value. Several biological activities are reported by this plant, including antimicrobial, antioxidant, anticancer, anti-inflammatory, anti-metabolic disorders, and anti-osteoclastogenic activities. Further research is needed to validate the efficacy and safety of this plant and to investigate the mechanisms of action underlying the observed effects.

Pathways for integrating historical information into fisheries decision‐making

AbstractHistorical information has provided key insights into long‐term ecological change to marine species and ecosystems, with value to fisheries. Yet, pathways to integrate these diverse data sources into fisheries decision‐making have not been clear. Here, we identify an array of biological, ecological, and social information suitable for contemporary science‐based decision‐making, derived from local ecological knowledge, historical archives, archaeological middens and palaeoecological material. We outline two broad pathways to integrate these historical data into fisheries decision‐making, demonstrating that data‐driven use of historical information is relevant across a range of management contexts. First, historical information can inform fisheries assessments that range from simple to complex, affecting indicators of stock status. Second, it can inform estimates of biological potential and social preference, affecting the choice of fisheries reference points. Using the Caribbean Sea as an example, we illustrate these ideas with case studies representing diverse species and historical data types. Integrating historical data can improve indicators of the current state of fish populations and result in management decisions based on a more complete understanding of a potential range of variation, avoiding shifted baselines. The urgency of this work is underscored by accelerating environmental changes and the rapid loss of invaluable historical information sources. By illuminating pathways, our goal is to increase the accessibility of these types of information and to underscore that scientists, managers, and resource users have roles to play in identifying and integrating relevant long‐term data at various spatial and temporal scales to sustainably manage marine fisheries.

Rapid intensification of tropical cyclones in the Gulf of Mexico is more likely during marine heatwaves

Tropical cyclones can rapidly intensify under favorable oceanic and atmospheric conditions. This phenomenon is complex and difficult to predict, making it a serious challenge for coastal communities. A key contributing factor to the intensification process is the presence of prolonged high sea surface temperatures, also known as marine heatwaves. However, the extent to which marine heatwaves contribute to the potential of rapid intensification events is not yet fully explored. Here, we conduct a probabilistic analysis to assess how the likelihood of rapid intensification changes during marine heatwaves in the Gulf of Mexico and northwestern Caribbean Sea. Approximately 70% of hurricanes that formed between 1950 and 2022 were influenced by marine heatwaves. Notably, rapid intensification is, on average, 50% more likely during marine heatwaves. As marine heatwaves are on the increase due to climate change, our findings indicate that more frequent rapid intensification events can be expected in the warming climate.

THE DINOFLAGELLATES OF THE GENERA CERATIUM AND ORNITHOCERCUS COLLECTED IN THE GOLFO DE SALAMANCA, COLOMBIAN CARIBBEAN SEA

A morphological study was done of the Dinoflagellates belonging to the genera Ceratium and Ornithocercus found on the samples collected in 1996 the Gulf of Salamanca, Colombian Caribbean Sea. A total of 30 species and three morphotypes of the first genus, and three species of the second one, are described complementarily .

Sea Level Modulation of Atlantic Nitrogen Fixation Over Glacial Cycles

AbstractN2 fixation in low‐latitude surface waters dominates the input of fixed nitrogen (N) to the global ocean, sustaining ocean fertility. In the Caribbean Sea, higher foraminifera‐bound (FB‐)δ15N indicates a decline in N2 fixation during ice ages, but its cause and broader implications are unclear. Here, we report three additional Atlantic FB‐δ15N records, from the subtropical North and South Atlantic gyres (MSM58‐50 and DSDP Site 516) and the equatorial Atlantic (ODP Site 662). Similar glacial and interglacial δ15N in the equatorial Atlantic suggests a stable δ15N for the nitrate below the gyre thermoclines. The North Atlantic record shows a FB‐δ15N rise during the ice ages, resembling a previously published FB‐δ15N record from the South China Sea. The commonality among the FB‐δ15N records is that they resemble sea level‐driven variation in regional shelf area, with high FB‐δ15N (inferred reduction in N2 fixation) during periods of low shelf area. The South China Sea shows the largest δ15N signal, the subtropical North Atlantic shows less, and the South Atlantic shows the least, the same ordering as the ice age reductions in continental shelf area in the different regions. Reduced shelf sedimentary denitrification would have increased the nitrogen‐to‐phosphorus ratio of the nutrient supply to open ocean surface waters, leading to decreased N2 fixation and thus higher gyre thermocline nitrate δ15N, explaining the higher FB‐δ15N of peak ice ages. These observations identify shelf sediment denitrification as an important regional driver of modern N2 fixation and imply strong basin‐scale coupling of fixed nitrogen losses and inputs.

Disruptions in thermohaline staircases caused by subsurface mesoscale eddies in the eastern Caribbean Sea

Thermohaline staircases and mesoscale eddies play crucial roles in the transport of heat, salt, and nutrients in the ocean, yet their complex relationship remains unclear due to the limitations in observational resolution and lateral range. Here, utilizing high spatial resolution seismic images with a total length of 2518 km, we show the widespread occurrence of thermohaline staircases in the eastern Caribbean Sea and demonstrate their three-dimensional distribution. These staircases occupy about 70% of the total length of the seismic lines, with the remaining 30% occupied by six subsurface mesoscale eddies. These staircases are disrupted and interrupted due to the enhanced turbulent diffusivity driven by the vertical shear of these eddies. The numerous high-resolution seismic observations presented herein enhance our comprehension of the interplay between staircases and multiscale oceanic dynamical processes.

Cryptic invasions of Pseudopolydora (Annelida: Spionidae), with description of a new species from Queensland, Australia

During surveys worldwide, we collected adult and larval specimens of Pseudopolydora Czerniavsky, 1881 similar to P. achaeta Radashevsky & Hsieh, 2000 and P. rosebelae Radashevsky & Migotto, 2009 far from their type localities in Taiwan and Brazil, respectively. Analysis of sequence data of five gene fragments: mitochondrial COI and 16S rDNA, nuclear 18S rDNA and 28S rDNA, and Histone 3 (3114 bp in total) of individuals from Nha Trang Bay (Vietnam), São Paulo (Brazil), Florida (USA), and the Caribbean Sea (Martinique) confirmed their conspecificity with P. achaeta from Taiwan. Based on the morphology, we also report this species for the first time for the East Sea (South Korea) and provide new records for the north-western part of the Sea of Japan (Russia). The analysis also showed the conspecificity of worms from Vietnam with P. rosebelae from Brazil. Based on the morphology, we also report P. rosebelae for the first time for the Caribbean Sea (Belize), South China Sea (Thailand), and Hawaii. Developed pelagic larvae of P. achaeta and P. rosebelae from Nha Trang Bay are described and illustrated. A worm from the Great Barrier Reef (Queensland, Australia) earlier identified as P. cf. rosebelae, is referred to the new species Pseudopolydora nivea sp. nov. Following our earlier hypothesis about the origin of Pseudopolydora in the Indo-West Pacific Ocean, we explain the occurrence of these worms, including Pseudopolydora floridensis Delgado-Blas, 2008, on the Atlantic coasts of North and South America by unintentional transportation in ballast water, followed by successful invasions. We assume that the penetration of warm waters of the East China Sea through the Korea Strait and the warming of the waters of the Sea of Japan have led to the extension of the range of tropical-subtropical P. achaeta to the north-western part of the Sea of Japan.

Characteristics of internal waves within thermohaline staircase region in the Caribbean Sea

Thermohaline staircases play a crucial role in the vertical transport of heat and salt in the thermocline. However, there are few in-situ observations of internal waves within thermohaline staircases. The seismic method offers high horizontal resolution and full ocean depth images over large volumes of the ocean, which can enable the visualization of internal waves within the thermohaline staircase region. In this paper, we characterize and analyze internal waves within thermohaline staircases in the Caribbean Sea using two-dimensional seismic data. Snapshots of fine structure displacements caused by internal waves are captured. We calculate the horizontal wavenumber spectra of the vertical displacement of internal waves, which closely align with the Garrett-Munk tow spectrum, indicating features of background internal wave field. We employed the Empirical Mode Decomposition (EMD) method to analyze vertical displacement data of internal waves derived from seismic data and obtained new results. The internal waves within thermohaline staircases consist of some dominant wavelength components of around 0.34 km, 0.83 km, 1.8 km, 6.25 km, 12.5 km, and 25 km. Wavelengths of approximately 0.34 km, 0.83 km, 1.8 km, and 6.25 km are coupled between the upper and lower sections, indicating the vertical transmission of the energy of high-wavenumber internal waves. By applying the prestack migration method, we observed that internal waves within thermohaline staircases display a staggered pattern. Except for the fractured strip structure, other reflectors show subtle alterations, suggesting that the thermohaline staircase stays stable during the acquisition period. Seismic oceanography emerges as a reliable method for studying internal wave characteristics within thermohaline staircases. It has the capacity to facilitate research on the complex dynamics of the ocean at multiple scales.

Topology Testing and Demographic Modeling Illuminate a Novel Speciation Pathway in the Greater Caribbean Sea Following the Formation of the Isthmus of Panama.

Recent genomic analyses have highlighted the prevalence of speciation with gene flow in many taxa and have underscored the importance of accounting for these reticulate evolutionary processes when constructing species trees and generating parameter estimates. This is especially important for deepening our understanding of speciation in the sea where fast moving ocean currents, expanses of deep water, and periodic episodes of sea level rise and fall act as soft and temporary allopatric barriers that facilitate both divergence and secondary contact. Under these conditions, gene flow is not expected to cease completely while contemporary distributions are expected to differ from historical ones. Here we conduct range-wide sampling for Pederson's cleaner shrimp (Ancylomenes pedersoni), a species complex from the Greater Caribbean that contains three clearly delimited mitochondrial lineages with both allopatric and sympatric distributions. Using mtDNA barcodes and a genomic ddRADseq approach, we combine classic phylogenetic analyses with extensive topology testing and demographic modeling (10 site frequency replicates x 45 evolutionary models x 50 model simulations/replicate = 22,500 simulations) to test species boundaries and reconstruct the evolutionary history of what was expected to be a simple case study. Instead, our results indicate a history of allopatric divergence, secondary contact, introgression, and endemic hybrid speciation that we hypothesize was driven by the final closure of the Isthmus of Panama and the strengthening of the Gulf Stream Current ~3.5 million years ago. The history of this species complex recovered by model-based methods that allow reticulation differs from that recovered by standard phylogenetic analyses and is unexpected given contemporary distributions. The geologically and biologically meaningful insights gained by our model selection analyses illuminate what is likely a novel pathway of species formation not previously documented that resulted from one of the most biogeographically significant events in Earth's history.

Quantifying stability and resilience of eco-social keystone species complexes for coastal marine ecosystems of the Caribbean Sea and eastern Pacific: applications in conservation and monitoring programmes.

The local stability and resilience of 13 eco-social keystone species complexes (eco-social KSCs)-considered as conservation and monitoring units-were quantified in coastal marine ecosystems located in the Caribbean and eastern Pacific. Based on Routh-Hurwitz's criterion and Levins' criteria, the eco-social KSCs corresponding to Islas Marietas National Park (Mexico) emerged as the most locally stable and resilient ecosystem. To the contrary, the eco-social KSCs determined for Guala Guala Bay (Chile) and Xcalak Reef National Park (Caribbean) were the least stable and resilient, respectively. In terms of sensitivity, the eco-social KSCs corresponding to El Cobre Bay (Chile) presented the greatest number of sensitive components. The ecological section of the KSCs is formed by a tri-trophic network, dominating self-negative feedbacks. In the case of the socio-economic section, the fisher could exhibit the three types of self-feedbacks, and instead, the demand should be controlled. The identification of eco-social KSCs and the quantification of their stabilities and resiliences allow us to approach ecosystem-based fisheries management under a climate change context. Therefore, we suggest assessing and monitoring the persistence of the eco-social KSCs herein analysed over time, as a way to conserve the fundamental network structure of these ecosystems intervened by fishing.This article is part of the theme issue 'Connected interactions: enriching food web research by spatial and social interactions'.

Fish Acoustic Detection Algorithm Research: a deep learning app for Caribbean grouper calls detection and call types classification

In this paper, we present the first machine learning package developed specifically for fish calls identification within a specific range (0–500Hz) that encompasses four Caribbean grouper species: red hind (E. guttatus), Nassau (E. striatus), yellowfin (M. venenosa), and black (M. bonaci). Because of their ubiquity in the soundscape of the grouper’s habitat, squirrelfish (Holocentrus spp.) sounds along with vessel noise are also detected. In addition the model is also able to separate grouper species call types. This package called FADAR, the Fish Acoustic Detection Algorithm Research is a standalone user-friendly application developed in Matlab™. The concept of FADAR is the product of the evaluation of various deep learning architectures that have been presented in a series of published articles. FADAR is composed of a main algorithm that can detect all species calls including their call types. The architecture of this model is based on an ensemble approach where a bank of five CNNs with randomly assigned hyperparameters are used to form an ensemble of classifiers. The outputs of all five CNNs are combined by a fusion process for decision making. At the species level, the output of the multimodel is thus used to classify the calls in terms of their types. This is done by species specific deep learning models that have been thoroughly evaluated in the literature on the species concerned here, including transfer learning for red hind and yellowfin groupers and custom designed CNN for Nassau grouper, which has a greater number of known call types than the other species. FADAR was manually trained on a diversity of data that span various regions of the Caribbean Sea and also two recorder brands, hydrophone sensitivities, calibrations and sampling rates, including a mobile platform. This strategy has conferred FADAR substantive robustness to a diversity of noise level and sources that can be found in the grouper calls frequency band such as vessels and marine mammals. Performance metrics based on sensitivity (recall) and specificity showed the same performance level for both balanced and unbalanced datasets and at locations not used in the training set.

The skull of the Turks and Caicos rock iguana, Cyclura carinata (Squamata: Iguanidae).

We provide a detailed and first description of the skull, hyoid apparatus, and trachea of the Turks and Caicos rock iguana, Cyclura carinata (Squamata: Iguanidae). Cyclura is a radiation of iguanas restricted to islands of the Caribbean Sea. Species of Cyclura have high rates of endemism, and all species are severely threatened with extinction. Our anatomical description of this threatened iguana is based on high-resolution computed tomography scans of one adult, one putative adult or near adult, and one juvenile specimen, and includes three-dimensional segmented renderings and visualizations. We discuss some observations of intraspecific and ontogenetic variation, and provide a brief comparison with specimens of another species of Cyclura and published descriptions of other iguanas. Our study provides a cranial osteological framework for Cyclura and augments the body of knowledge on iguana anatomy generally. Finally, we posit that our description and future studies may facilitate identification of fossil Cyclura, which could help understand the paleobiogeography of the genus.

High-precision U-Pb geochronology for the Miocene Climate Optimum and a novel approach for calibrating age models in deep-sea sediment cores

Abstract Scientific ocean drilling cores recovered years ago (legacy cores), especially as recovered by rotary drilling, commonly show incomplete recovery and core disturbance. We present a novel method to date such cores by presenting the first high-precision U-Pb zircon ages targeting the duration of the Miocene Climate Optimum (MCO; ca. 17–14 Ma) from volcanic ashes at Ocean Drilling Program Site 1000 (on the Nicaragua Rise in the Caribbean Sea). We place these ages within a newly developed framework to address incomplete core recovery and use them to calibrate a high-resolution bulk carbonate δ13C and δ18O record. Our Site 1000 ages show that volcanism of the Columbia River Basalt Group (CRBG) large igneous province was coincident with the interval of greatest sustained MCO warmth at this site. However, if the CRBG were the primary driver of the MCO, our chronology may allow for outgassing preceding volcanism as a major source of CO2. We thus document a promising new way to obtain highly resolved, accurate, and precise numerical age models for legacy deep-sea sediment cores that does not depend on correlation to other records.

Size‐based indicators of unexploited deep‐sea community in the Colombian Caribbean Sea

AbstractComposition, size distribution, structure, and function of deep‐sea marine communities must be understood before they are impacted by anthropogenic effects. The deep‐sea ecosystem of the Colombian Caribbean Sea is unexploited with no fishing activity ever registered. We quantified the current state of the marine community using body size distribution (size‐spectra), size‐based indicators, minimum length (LMIN), maximum length (LMAX), average length (Lmean), standard deviation of length (LSD), 10th and 90th percentiles of the length distribution, Shannon–Wiener diversity (H′), and Pielou's evenness (J′) to generate a baseline of potential ecological indicators that contribute to management and conservation of the Colombian bento‐demersal community of deep‐sea marine ecosystem. Sampling was in the Colombian Caribbean Sea at 58 stations during four samplings in August and December 2009, 21 stations in March and May 2010, and 45 stations from August to December 2020, using the swept area method, at depths of 200–550 m. Catches included >50% families and species of fish, followed by 27 families (30%) and 33 and species (37%) of crustaceans. Chondrichthyes included 14% families and 9–11% species. Cephalopods included 2–3% families and 1–4% species. Size‐spectra analysis confirmed expected values for unexploited communities in three sampling years for teleostei, crustacea, and whole community.

The Introduction of American Naval Ordnance in the Caribbean Sea in the Late Modern Period: Operational dimensions and American expansion

Since the 1970s, the Caribbean has been a hub for nautical archaeology, often focusing on European naval ordnance as evidence of early modern maritime occupation. The mid-nineteenth century ushered in a new military context with rapid American expansion, introducing contemporary innovations in American naval artillery. This study delves into the significance of American naval ordnance in the late nineteenth-century Caribbean, with a focus on its potential for revealing new imperialism and evolving regional dynamics in the archaeological record. It analyses the late nineteenth-century naval operational context in the Caribbean, concentrating on USS Kearsarge and its guns’ history from 1862–94 and its loss on Roncador Cay. Primary sources provide insight into their evolution associated with the wreck site, with emphasis placed on Dahlgren shell guns as a potential identifying feature.

Archaeological evidence for long-term human impacts on sea turtle foraging behaviour.

Early conservation efforts to prevent the loss of green sea turtles (Chelonia mydas) from the Caribbean Sea jumpstarted marine habitat and biodiversity protection. However, even there, limitations on historical observations of turtle ecology have hampered efforts to contextualize foraging behaviours for conservation management. We integrate isotopic and zooarchaeological evidence from green sea turtles harvested at the Miskito Cays (Nicaragua) to assess foraging behaviour before and after a step change in harvesting intensity. Highly structured isotopic evidence shows greater foraging adaptability in earlier populations. This provides a counterpoint to recent synthesis, suggesting the ecological non-exchangeability of sea turtles, which complicates conservation planning focused on genetic-stock-based repopulation. In contrast, our results suggest future populations would have a capacity for higher degrees of ecological exchangeability than current perspectives allow. This highlights a need to consider the kinds of longer term perspectives, such as those offered by archaeological materials, when planning for future sea turtle recovery.

Expanding the cacao group: three new species of Theobroma sect. Herrania (Malvaceae: Byttnerioideae) from the Western Amazon Basin

SummaryDuring the preparation of a taxonomic revision of Theobroma sensu lato (Malvaceae, Byttnerioideae), three new species of T. sect. Herrania were found: Theobroma globosum, T. nervosum and T. schultesii, which are described herein. Theobroma globosum and T. nervosum belong to T. sect. Herrania subsect. Subcymbicalyx, with species mostly found in the Amazon Basin, characterised, among other features, by petal ligules at least ten times longer than the petal claws. Theobroma schultesii is from T. sect. Herrania subsect. Herrania, with species with petal ligules less than ten times longer than the claw and is mainly found in the southern parts of the Caribbean Sea, the Pacific Ocean, western Colombia, and northern Ecuador. Theobroma globosum is diagnosed by the combination of spherical fruits with smaller leaflets and midrib proportions when compared to other species from the same region. Theobroma nervosum is identified by its toothed, obovate leaflets with secondary veins protruding beyond the leaflet margins, forming elongated projections across the entire leaflet. Theobroma schultesii exhibits a unique set of features in T. sect. Herrania subsect. Herrania, having both petiolulate leaflets and a cupuliform calyx.

Observation and Projection of Marine Heatwaves in the Caribbean Sea from CMIP6 Models

Observation and Projection of Marine Heatwaves in the Caribbean Sea from CMIP6 Models