Biogeochemical Cycles Of Carbon Research Articles

Effects of straw and its biochar applications on the abundance and community structure of CO2-fixing bacteria in a sandy agricultural soil

Crop straw and biochar application can potentially increase carbon sequestration and lead to changes in the microbial community in agricultural soils. Sequestration of CO2 by autotrophic microorganisms is key to biogeochemical carbon cycling in soil ecosystems. The effects of straw and its biochar, derived from slow pyrolysis, on CO2 fixation bacteria in sandy soils, remain unclear. Therefore, this study compared the response of abundance and community of CO2 fixation bacteria to the two straw application methods in a sandy agricultural soil. The overall aim of the study was to achieve an efficient use of straw residues for the soil sustainablility. We investigated the soil organic carbon content and autotrophic bacteria over four consecutive years (2014–2018) in a field experiment, including the following four treatments: whole maize straw amendment (S), whole maize straw translated biochar amendment (B), half biochar and half straw amendment (BS), and control (CK) without straw or biochar amendment. The autotrophic bacterial abundance and community structure were measured using molecular methods of real-time PCR, terminal restriction fragment length polymorphisms (T-RFLP), and a clone library targeting the large subunit gene (cbbL) of ribulose-1,5-bisphosphate carboxylase/oxygenase. The results showed that the content of soil total organic carbon (TOC), dissolved organic carbon (DOC), and microbial biomass carbon (MBC) in B, S, and BS treatments was significantly increased compared with the CK treatment. Soil TOC and available potassium (AK) in the B treatment significantly increased by 15.4% and 23.3%, respectively, but soil bulk density, DOC, and MBC significantly decreased by 8.5%, 10.6%, and 14.5%, respectively, compared with the S treatment. The abundance of the cbbL gene as well as of the bacterial 16S rRNA gene increased significantly in straw or biochar application treatments as compared to the CK treatment. The B treatment, but not the BS treatment, significantly increased the cbbL gene abundance when compared to the S treatment. No significant differences were observed in the bacterial 16S rRNA gene abundance among the three straw or biochar applications. The application of straw biochar could increase the diversity of the autotrophic bacteria, which also altered the overall microbial composition. Physicochemical properties of the soil, such as soil pH, SOC, and bulk density, can help explain the shift in soil microbial composition observed in the study. Taken together, our results suggest that straw biochar, rather than straw application, leads to an increase in the abundance and diversity of CO2-fixing bacteria, which would be advantageous for soil autotrophic CO2 fixation.

Impact of water column stability dynamics on the succession of plankton food web types in the offshore area of the Adriatic Sea

Vertical mixing and stratification are among the most important physical processes controlling nutrient dynamics, the dominant category of primary producers and consequently the dominant types of food web, and are therefore important for the assessment of the marine ecosystem's response to global climate change. This study showed consistent short-term cyclic successions of the plankton food web types, governed by the dynamics of water column stability changes, occurring in generally oligotrophic, phosphate deficient surface waters of the open middle Adriatic Sea. The biogeochemical nitrogen cycle appeared as a key driving force responsible for the food web structure changes. The ‘herbivorous food web’ dominated during the nitrate-rich mixed water column period (winter) and gradually changed to ‘multivorous food web’ where large phytoplankton still constitute a significant fraction of phytoplankton. This intermediate type of food web lasted for a short time and quickly changed to the typical ‘microbial food web’, which then dominated during the stratified water column period (summer) and was characterised by a large proportion of picoplankton size-fraction organisms in total plankton biomass and production. Furthermore, at the very end of summer, the high bacterial carbon flux through the ‘microbial loop’ was established. The succession of food web types affects the mechanisms of bacterial control in a way that ‘bottom up’ control dominated during the mixed water column period and ‘top-down’ control prevailed during the stratified period. Since the ongoing global warming is expected to change water column stability dynamics and thereby significantly affect the supply of nutrients in surface waters, this study helps to understand the possible direction of changes in the plankton food webs of the Adriatic Sea, and consequent changes in marine nitrogen and carbon biogeochemical cycles.

Application of Hydrochar Altered Soil Microbial Community Composition and the Molecular Structure of Native Soil Organic Carbon in a Paddy Soil.

The benefits and disadvantages of hydrochar incorporation into soil have been heavily researched. However, the effect of hydrochar application on the soil microbial communities and the molecular structure of native soil organic carbon (SOC) has not been thoroughly elucidated. This study conducted an incubation experiment at 25 °C for 135 days using a soil column with 0.5 and 1.5% hydrochar-amended paddy soil to explore the interconnections between changes in soil properties and microbial communities and shifts in native SOC structure using electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI-FT-ICR-MS) and NMR after hydrochar application. Hydrochar addition decreased the labile SOC fraction by 15.6-33.6% and increased the stable SOC fraction by 10.3-27.0%. These effects were significantly stronger for 1.5% hydrochar-treated soil. Additionally, hydrochar addition induced the native SOC with 1.0-3.0% more carbon and 6.0-13.0% higher molecular weight. The SOC in hydrochar-amended soil contained more aromatic compounds but fewer carbohydrates and lower polarity. This was resulted by a statistically significant reduction in Sphingobacterium, which was active in polycyclic aromatic hydrocarbon degradation, and an increase in Flavobacterium, Anaerolinea, Penicillium, and Acremonium, which were the efficient decomposers of labile SOC. These findings will help elucidate the potential influence of hydrochar on the carbon biogeochemical cycle in the soil.

Microbial community dynamics and coexistence in a sulfide-driven phototrophic bloom

BackgroundLagoons are common along coastlines worldwide and are important for biogeochemical element cycling, coastal biodiversity, coastal erosion protection and blue carbon sequestration. These ecosystems are frequently disturbed by weather, tides, and human activities. Here, we investigated a shallow lagoon in New England. The brackish ecosystem releases hydrogen sulfide particularly upon physical disturbance, causing blooms of anoxygenic sulfur-oxidizing phototrophs. To study the habitat, microbial community structure, assembly and function we carried out in situ experiments investigating the bloom dynamics over time.ResultsPhototrophic microbial mats and permanently or seasonally stratified water columns commonly contain multiple phototrophic lineages that coexist based on their light, oxygen and nutrient preferences. We describe similar coexistence patterns and ecological niches in estuarine planktonic blooms of phototrophs. The water column showed steep gradients of oxygen, pH, sulfate, sulfide, and salinity. The upper part of the bloom was dominated by aerobic phototrophic Cyanobacteria, the middle and lower parts by anoxygenic purple sulfur bacteria (Chromatiales) and green sulfur bacteria (Chlorobiales), respectively. We show stable coexistence of phototrophic lineages from five bacterial phyla and present metagenome-assembled genomes (MAGs) of two uncultured Chlorobaculum and Prosthecochloris species. In addition to genes involved in sulfur oxidation and photopigment biosynthesis the MAGs contained complete operons encoding for terminal oxidases. The metagenomes also contained numerous contigs affiliating with Myoviridae viruses, potentially affecting Chlorobi. Our data suggest a short sulfur cycle within the bloom in which elemental sulfur produced by sulfide-oxidizing phototrophs is most likely reduced back to sulfide by Desulfuromonas sp.ConclusionsThe release of sulfide creates a habitat selecting for anoxygenic sulfur-oxidizing phototrophs, which in turn create a niche for sulfur reducers. Strong syntrophism between these guilds apparently drives a short sulfur cycle that may explain the rapid development of the bloom. The fast growth and high biomass yield of Chlorobi-affiliated organisms implies that the studied lineages of green sulfur bacteria can thrive in hypoxic habitats. This oxygen tolerance is corroborated by oxidases found in MAGs of uncultured Chlorobi. The findings improve our understanding of the ecology and ecophysiology of anoxygenic phototrophs and their impact on the coupled biogeochemical cycles of sulfur and carbon.

The magnitude of erosion‐induced carbon (C) flux and C‐sequestration potential of eroded lands in India

AbstractGlobally, soil erosion transports a significant amount of carbon (C), but the magnitude of erosion‐associated loss of soil organic carbon (SOC) from India is poorly quantified. The present study quantified the C flux induced by accelerated erosion for different states of India where soil erosion is the most critical form of land degradation. The lateral transport of eroded C was estimated for individual Indian states using spatially referenced data for soil erosion rates that were assessed using the universal soil loss equation (USLE) applied to the information about 1649 soil association units and their SOC inventories across the country. The results indicated that soil erosion varies widely across the states. The states lying in the north region (Uttar Pradesh, Uttarakhand, Jammu & Kashmir and Himachal Pradesh) and all states of the north‐eastern Himalayan region, Peninsular plateau (Madhya Pradesh, Chattisgarh and others) and Peninsular India (Orissa, Andhra Pradesh, Tamil Nadu, and Karnataka) showed more soil loss due to water erosion. At the national level in India, erosion transported about 4.87 Pg of soil and 115.36 Tg of C every year, which consequently emits about 34.61 Tg of C to the atmosphere. Among the states in India, Madhya Pradesh had the highest value of erosion‐associated C loss (20.33 Tg C yr−1), followed by Chhattisgarh, Maharashtra, Uttar Pradesh and Andhra Pradesh with losses of 9.98, 9.18, 9.11 and 8.70 Tg C yr−1, respectively. The possibility of C sequestration in various degraded lands was also explored. The results revealed that between 19 and 27 Tg C yr−1 could be sequestered in soils by adopting achievable technological options in erosion‐affected areas of India, offering the potential to reduce approximately 24.5% of the total greenhouse gas emissions from the agricultural soils of India (94 Tg C).Highlights Eroded carbon is an important factor in biogeochemical carbon (C) cycle in India. A new database on lateral transport of C is created for India. Quantity of C lost due to water erosion in India is 115.36 Tg yr−1. Erosion control will help to reduce C emission by 19–27 Tg C yr−1 from India.

腾格里沙漠东南缘不同类型生物土壤结皮对土壤有机碳矿化的影响

PDF HTML阅读 XML下载 导出引用 引用提醒 腾格里沙漠东南缘不同类型生物土壤结皮对土壤有机碳矿化的影响 DOI: 10.5846/stxb201902220317 作者: 作者单位: 作者简介: 通讯作者: 中图分类号: 基金项目: 国家自然科学基金项目（41671111，41530746） Carbon mineralization of soil covered by different types of biological crusts in the southeastern fringe of the Tengger Desert Author: Affiliation: Fund Project: 摘要 | 图/表 | 访问统计 | 参考文献 | 相似文献 | 引证文献 | 资源附件 | 文章评论 摘要:生物土壤结皮（BSCs）是荒漠生态系统的重要组成部分，是该区土壤碳循环及碳平衡的关键影响因素。研究了腾格里沙漠东南缘不同类型生物土壤结皮覆盖下土壤碳矿化过程及其对温度（10℃、25℃和35℃）和水分（土壤含水量10%和25%）变化响应特征，分析了土壤碳矿化过程与土壤理化性质的关系。结果表明：（1）结皮的形成和发育显著影响土壤有机碳矿化过程，藻类、地衣和藓类结皮覆盖的土壤碳矿化速率和CO2-C累积释放量均显著高于去除结皮的土壤，不同类型BSCs覆盖土壤和去除结皮土壤之间均表现为藓类结皮土壤 > 地衣结皮土壤 > 藻类结皮。（2）含结皮层土壤的平均和最大矿化速率均随温度升高和水分增加而逐渐增大，有结皮覆盖的土壤和去除结皮的土壤对温度和水分变化的响应规律相同。（3）有结皮土壤和去除结皮土壤碳矿化速率的温度敏感性（Q10）与结皮类型密切相关，均表现为藓类结皮 > 地衣结皮 > 藻类结皮。结果表明生物土壤结皮由以藻类为主向以藓类为主的演变进一步促进了土壤碳矿化过程，结皮对土壤碳循环的调控作用受水热等环境因子的共同影响。 Abstract:Biological soil crusts (BSCs) are the association of soil organisms including algea, cyanobacteria, bacteria, fungi, lichen and moss and soil particles, which cover as much as 70% of the interspaces between vegetation and are the key component of arid and semiarid ecosystems. They play a significant role in the process of soil formation and biogeochemical cycling of carbon and nitrogen. Although the functions of BSCs in soil carbon cycling in drylands have been extensively described in the literature, previous research has primarily focused on the effects of BSCs on soil carbon sequestration and respiration. Knowledge is rather poor regarding their effects on soil organic carbon mineralization which is the major part of global carbon cycling and an important process of carbon loss from soils in terrestrial ecosystem. Consequently, understanding the effects of BSCs on soil organic mineralization and their regulating factors is crucial to thoroughly addressing their contribution to the soil carbon budget and balance in drylands.In this study, both intact soil (IS) and BSC-being-removed soil (BRS) samples were collected from algae-, lichen-, and moss-covered soil plots in the southeastern fringe of the Tengger Desert. Carbon mineralization rates of different types of soils and their responses to soil moisture and temperature were investigated by dark incubation. The relationships between soil mineralization rates and soil physicochemical factors were also analyzed. The results showed that (1) SOC mineralization rates and cumulative CO2-C release from IS were significantly higher than those from BRS. These two parameters for both IS and BRS were in the order moss crust > lichen crust > algae crust. (2) The average and maximum soil carbon mineralization rates increased with increasing magnitude of incubation temperature and soil water content, and the dynamic patterns of their response both were similar. (3) Temperature sensitivity (Q10) of the three intact soils and their respective subsoils were closely linked to BSC types, with the highest value for moss-covered soil and the lowest for algae-covered soil. Our understanding of the effects of on soil carbon mineralization suggests that the evolution of BSCs from algae-dominated to moss-dominated soil promoted carbon mineralization, and their regulation of soil carbon cycling was strongly controlled by environmental factors, such as temperature and soil moisture. 参考文献 相似文献 引证文献

Research on methods, techniques and technologies of carbon sequestration in soil

Soil is one of the natural reservoirs of the carbon biogeochemical cycle, incorporating approximately 6000 billion tons of carbon. Given that with the industrial development more and more carbon is emitted into the atmosphere, solutions, technologies and methods are being sought to reduce this carbon or, where appropriate, it is not eliminated into the atmosphere. The purpose of this paper is to study and identify the simplest methods to be applied in agriculture, for soil processing, by identifying the techniques, technologies and equipment to achieve this without turning the furrow, so that the carbon incorporated in the soil by plants remains sequestered there.

Characterisation of humic acids in fen peat

Fens store significant amounts of organic matter and thus are of high importance from the perspective of the organic carbon biogeochemical cycle. Fen peat comprises moderately to highly decomposed higher plant remains with relatively high mineral matter content. Humic acids form the major part of fen peat organic matter; they are also the most refractory and recalcitrant natural substances to degradation, and thus they contain essential information regarding mire and peat development over large periods of time as well as the organic carbon biogeochemical cycle. Moreover, humic substances in fen peat are a prospective resource for applications in agriculture and other sectors. The aim of this study was to comparatively study properties of humic acids isolated from fen peat of varied botanical compositions and origins and to compare the impact of the precursor biological material on properties of the humification process and the resulting humic acids. The formation of humic acids of varied origins shows similarities; however, at the same time, differences can be found in the further development of humic acids, depending on the environment in which they are present.

ПРОБЛЕМЫ МОДЕЛИРОВАНИЯ БИОГЕОХИМИЧЕСКОГО ЦИКЛА УГЛЕРОДА В АГРОЛАНДШАФТАХ

ПРОБЛЕМЫ МОДЕЛИРОВАНИЯ БИОГЕОХИМИЧЕСКОГО ЦИКЛА УГЛЕРОДА В АГРОЛАНДШАФТАХ

Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae).

Environmental variation along the geographical space can shape populations by natural selection. In the context of global warming and changing precipitation regimes, it is crucial to understand the role of environmental heterogeneity in tropical trees adaptation, given their disproportional contribution to water and carbon biogeochemical cycles. Here, we investigated how heterogeneity in freshwater availability along tropical wetlands has influenced molecular variations of the black mangrove (Avicennia germinans). A total of 57 trees were sampled at seven sites differing markedly in precipitation regime and riverine freshwater inputs. Using 2,297 genome-wide single nucleotide polymorphic markers, we found signatures of natural selection by the association between variations in allele frequencies and environmental variables, including the precipitation of the warmest quarter and the annual precipitation. Additionally, we found candidate loci for selection based on statistical deviations from neutral expectations of interpopulation differentiation. Most candidate loci within transcribed sequences were functionally associated with central aspects of drought tolerance or plant response to drought. Moreover, our results suggest the occurrence of the rapid evolution of a population, probably in response to sudden and persistent limitations in plant access to soil water, following a road construction in 1974. Observations supporting rapid evolution included the reduction in tree size and changes in allele frequencies and in transcript expression associated with increased drought tolerance through the accumulation of osmoprotectants and antioxidants, biosynthesis of cuticles, protection against protein degradation, stomatal closure, photorespiration and photosynthesis. We describe a major role of spatial heterogeneity in freshwater availability in the specialization of this typically tropical tree.

Linking stream microbial community functional genes to dissolved organic matter and inorganic nutrients

AbstractThere is now increasing evidence for the importance of microbial regulation of biogeochemical cycling in streams. Resource availability shapes microbial community structure, but less is known about how landscape‐mediated availability of nutrients and carbon can control microbial functions in streams. Using comparative metagenomics, we examined the relationship between microbial functional genes and composition of dissolved organic matter (DOM), nutrients, and suspended microbial communities in 11 streams, divided into three groups based on the predominant land cover category (agriculture, forested, or wetland). Using weighted gene co‐occurrence network analysis, we identified clusters of functions related to DOM composition, agricultural land use, and/or wetland and forest land cover. Wetland‐dominated streams were characterized by functions related to nitrogen metabolism and processing of aromatic carbon compounds, with strong positive correlations with dissolved organic carbon concentration and DOM aromaticity. Forested streams were characterized by metabolic functions related to monomer uptake and carbohydrates, such as mannose and fructose metabolism. In agricultural streams, microbial functions were correlated with more labile, protein‐like DOM, PO4, and NO3, likely reflecting functional adaptation to labile DOM and higher nutrient concentrations. Distinct changes in the functional composition and loss of functional diversity of microorganisms became evident when comparing natural to agricultural catchments. Although all streams showed signs of functional redundancy, loss of species richness per function in agricultural catchments suggests that microbial functions in natural catchments may be more resilient to disturbance. Our results provide new insight into microbial community functions involved in nutrient and carbon biogeochemical cycles and their dependence on specific environmental settings.

Absorption and Fluorescence Spectra of Dissolved Organic Matter in Rivers of the Three Gorges Reservoir Area Under the Background of Urbanization

Studying the influences of urbanization on the composition, chemical structure, source and migration of dissolved organic matter (DOM) in rivers is of great significance for aquatic ecosystem protection and biogeochemical carbon (C) cycling. The DOM spectroscopic characteristics of the three typical rivers (Taohuaxi, Nanhe, and Puli) with different urbanization levels in the Three Gorges Reservoir area were investigated using the ultraviolet-visible (UV-Vis) absorption spectrum and three-dimensional fluorescence spectroscopy. The results demonstrated that the higher the degree of urbanization in rivers, the greater the concentrations of DOM and chromophoric dissolved organic matter (CDOM), the lower the humification degree and aromaticity of DOM, the smaller the proportion of hydrophobic components, the higher the relative level of protein-like substance concentration in DOM, and the greater the contribution of DOM from freshly autochthonous origins. The DOM of the three rivers was dominated by fulvic acids (E3/E4>3.5), and CDOM concentration was positively correlated with the concentration of DOM (P<0.01). There were significant positive correlations between the humification degree (SUVA254), aromaticity (SUVA280), and hydrophobic component (SUVA260) (P<0.01). The sources of humic substances in the DOM were mixed by terrestrial input and microbial or algae production (reflected by the fluorescence index averages of 1.7157-1.7571), and mainly from microbial sources.

Coordinated\xa0transformation of the gut microbiome and lipidome of bowhead whales provides novel insights into digestion

Whale digestion plays an integral role in many ocean ecosystems. By digesting enormous quantities of lipid-rich prey, whales support their energy intensive lifestyle, but also excrete nutrients important to ocean biogeochemical cycles. Nevertheless, whale digestion is poorly understood. Gastrointestinal microorganisms play a significant role in vertebrate digestion, but few studies have examined them in whales. To investigate digestion of lipids, and the potential contribution of microbes to lipid digestion in whales, we characterized lipid composition (lipidomes) and bacterial communities (microbiotas) in 126 digesta samples collected throughout the gastrointestinal tracts of 38 bowhead whales (Balaena mysticetus) harvested by Alaskan Eskimos. Lipidomes and microbiotas were strongly correlated throughout the gastrointestinal tract. Lipidomes and microbiotas were most variable in the small intestine and most similar in the large intestine, where microbiota richness was greatest. Our results suggest digestion of wax esters, the primary lipids in B. mysticetus prey representing more than 80% of total dietary lipids, occurred in the mid- to distal small intestine and was correlated with specific microorganisms. Because wax esters are difficult to digest by other marine vertebrates and constitute a large reservoir of carbon in the ocean, our results further elucidate the essential roles that whales and their gastrointestinal microbiotas play in the biogeochemical cycling of carbon and nutrients in high-latitude seas.

Pyrenoidal sequestration of cadmium impairs carbon dioxide fixation in a microalga.

Mixotrophic microorganisms are able to use organic carbon as well as inorganic carbon sources and thus, play an essential role in the biogeochemical carbon cycle. In aquatic ecosystems, the alteration of carbon dioxide (CO2 ) fixation by toxic metals such as cadmium - classified as a priority pollutant - could contribute to the unbalance of the carbon cycle. In consequence, the investigation of cadmium impact on carbon assimilation in mixotrophic microorganisms is of high interest. We exposed the mixotrophic microalga Chlamydomonas reinhardtii to cadmium in a growth medium containing both CO2 and labelled 13 C-[1,2] acetate as carbon sources. We showed that the accumulation of cadmium in the pyrenoid, where it was predominantly bound to sulphur ligands, impaired CO2 fixation to the benefit of acetate assimilation. Transmission electron microscopy (TEM)/X-ray energy dispersive spectroscopy (X-EDS) and micro X-ray fluorescence (μXRF)/micro X-ray absorption near-edge structure (μXANES) at Cd LIII- edge indicated the localization and the speciation of cadmium in the cellular structure. In addition, nanoscale secondary ion mass spectrometry (NanoSIMS) analysis of the 13 C/12 C ratio in pyrenoid and starch granules revealed the origin of carbon sources. The fraction of carbon in starch originating from CO2 decreased from 73 to 39% during cadmium stress. For the first time, the complementary use of high-resolution elemental and isotopic imaging techniques allowed relating the impact of cadmium at the subcellular level with carbon assimilation in a mixotrophic microalga.

Dynamics of atmospheric carbon dioxide over different land cover types in India.

This study presents an analysis of high-resolution space borne retrievals of the column-averaged dry-air mole fraction of carbon dioxide [Formula: see text] and the role of vegetation in controlling atmospheric CO2 dynamics over the Indian region. Nadir and glint mode [Formula: see text] retrievals from the Orbiting Carbon Observatory-2 (OCO-2) spectrometer for the period September 2014-July 2017 are studied with satellite-derived normalized difference vegetation index (NDVI) and rainfall over different land cover types. The atmospheric [Formula: see text] variability shows a strong negative correlation with satellite-derived NDVI. Higher rainfall favours the vegetative growth and photosynthetic activity, thus lowers atmospheric [Formula: see text] concentration. The mean monthly [Formula: see text] over terrestrial region of India is observed as 400.18 ± 3.85 ppm with seasonal variations over different land cover types. The correlation of [Formula: see text] with NDVI over mixed forest and deciduous broadleaf forest types was estimated as - 0.86, - 0.76 (p < 0.01), respectively. The study could also highlight strong seasonal [Formula: see text] variability at higher latitudinal zones of India. It is significant to note that space-based observations indicate that atmospheric carbon dioxide levels have surpassed a significant milestone of 400 ppm in recent times. The study provides significant inputs towards improving our understanding of terrestrial biogeochemical carbon cycle over India.

Afforestation driving long-term surface water browning.

Increase in surface water color (browning), caused by rising dissolved organic carbon (DOC) and iron concentrations, has been widely reported and studied in the last couple of decades. This phenomenon has implications to aquatic ecosystem function and biogeochemical carbon cycling. While recovery from acidification and changes in climate‐related variables, such as precipitation and length of growing season, are recognized as drivers behind browning, land‐use change has received less attention. In this study, we include all of the above factors and aim to discern their individual and combined contribution to water color variation in an unprecedentedly long (1940–2016) and highly resolved dataset (~20 times per month), from a river in southern Sweden. Water color showed high seasonal variability and a marked long‐term increase, particularly in the latter half of the dataset (~1980). Short‐term and seasonal variations were best explained by precipitation, with temperature playing a secondary role. All explanatory variables (precipitation, temperature, S deposition, and land‐use change) contributed significantly and together predicted 75% of the long‐term variation in water color. Long‐term change was best explained by a pronounced increase in Norway spruce (Picea abies Karst) volume—a measure of land‐use change and a proxy for buildup of organic soil layers—and by change in atmospheric S deposition. When modeling water color with a combination of explanatory variables, Norway spruce showed the highest contribution to explaining long‐term variability. This study highlights the importance of considering land‐use change as a factor behind browning and combining multiple factors when making predictions in water color and DOC.

Aggregation-dependent electron transfer via redox-active biochar particles stimulate microbial ferrihydrite reduction

Microbial Fe(III) reduction plays an important role for biogeochemical carbon and iron cycling in sediments and soils. Biochar is used as a soil amendment to increase fertility and lower N2O/CO2 emissions. It is redox-active and can stimulate microbial Fe(III) mineral reduction. It is currently unknown, however, how the aggregation of cells and Fe(III) minerals with biochar particles influence microbial Fe(III) reduction. Therefore, we determined rates and extent of ferrihydrite (Fh) reduction in S. oneidensis MR-1 cell suspensions with different particles sizes of wood-derived Swiss biochar and KonTiki biochar at different biochar/Fh ratios. We found that at small biochar particle size and high biochar/Fh ratios, the biochar, MR-1 cells and Fh closely aggregated, therefore addition of biochar stimulated electron transfer and microbial Fh reduction. In contrast, large biochar particles and low biochar/Fh ratios inhibited the electron transfer and Fe(III) reduction due to the lack of effective aggregation. These results suggest that for stimulating Fh reduction, a certain biochar particle size and biochar/Fh ratio is necessary leading to a close aggregation of all phases. This aggregation favors electron transfer from cells to Fh via redox cycling of the electron donating and accepting functional groups of biochar and via direct electron transfer through conductive biochar carbon matrices. These findings improve our understanding of electron transfer between microorganisms and Fe(III) minerals via redox-active biochar and help to evaluate the impact of biochar on electron transfer processes in the environment.

Inter‐annual simulation of global carbon cycle variations in a terrestrial–aquatic continuum

AbstractThe advanced process‐based model, National Integrated Catchment‐based Eco‐hydrology (NICE)‐BGC, which incorporates the whole process of carbon cycling in land, was modified to include the feedback between soil organic content and overland carbon fluxes. It is a crucial and difficult task to evaluate the balance of the terrestrial carbon budget including the effect of inland water robustly. To accomplish this purpose, NICE‐BGC was applied to quantify the global biogeochemical carbon cycle closely associated with the complex hydrological cycle during the 36 years between 1980 and 2015. The model demonstrated that the inter‐annual variations of carbon cycle have been greatly affected by the extreme weather patterns. In particular, spatial distribution of temporal trends in riverine carbon fluxes and their relation to soil organic carbon (SOC) were analysed between different biomes and major river basins. Although there was a positive relationship between SOC and riverine flux of dissolved organic carbon and particulate organic carbon in the northern boreal region, it is difficult to see this relation in other regions. Further, the evaluation of potential controlling factors of temporal trends in SOC and fluvial carbon exports was also helpful to quantify the inter‐annual variation or temporal trend caused by the various effects. SOC was more influenced by temperature variations, whereas riverine carbon exports were mainly determined by precipitation variations. Finally, net land flux including inland water (−1.49 ± 0.50 PgC/year) showed a slight decrease in the carbon sink in comparison with previous values (−2.33 ± 0.50 PgC/year). These results help to distinguish the carbon cycle in different river basins and to re‐evaluate carbon cycle change explicitly including the effect of inland water because this effect has been so far implicitly included within the range of uncertainty in the Earth's global carbon cycle comprising land, oceans, and atmosphere.

Data‐Driven Modeling of the Distribution of Diazotrophs in the Global Ocean

AbstractDiazotrophs play a critical role in the biogeochemical cycling of nitrogen, carbon, and other elements in the global ocean. Despite their well‐recognized role, the diversity, abundance, and distribution of diazotrophs in the world's ocean remain poorly characterized largely due to limited observations. Here we update the database of diazotroph nifH gene abundances and assess how environmental factors may regulate diazotrophs at the global scale. Our meta‐analysis more than doubles the number of observations in the previous database. Using linear and nonlinear regressions, we find that the abundances of Trichodesmium, UCYN‐A, UCYN‐B, and Richelia relate differently to temperature, light, and nutrients. We further apply a random forest algorithm to estimate the global distributions of these diazotrophic groups, identifying undersampled potential hot spots of diazotrophy in the South Atlantic and southern Indian Ocean, and in coastal waters. The distinct ecophysiologies of diazotrophs highlighted here argue for separate parameterizations of different diazotrophs in model simulations.

Trophic Status Is Associated With Community Structure and Metabolic Potential of Planktonic Microbiota in Plateau Lakes.

Microbes in various aquatic ecosystems play a key role in global energy fluxes and biogeochemical processes. However, the detailed patterns on the functional structure and the metabolic potential of microbial communities in freshwater lakes with different trophic status remain to be understood. We employed a metagenomics workflow to analyze the correlations between trophic status and planktonic microbiota in freshwater lakes on Yun-Gui Plateau, China. Our results revealed that microbial communities in the eutrophic and mesotrophic-oligotrophic lake ecosystems harbor distinct community structure and metabolic potential. Cyanobacteria were dominant in the eutrophic ecosystems, mainly driving the processes of aerobic respiration, fermentation, nitrogen assimilation, nitrogen mineralization, assimilatory sulfate reduction and sulfur mineralization in this ecosystem group. Actinobacteria, Proteobacteria (Alpha-, Beta-, and Gammaproteobacteria), Verrucomicrobia and Planctomycetes, occurred more often in the mesotrophic-oligotrophic ecosystems than those in the eutrophic ecosystems, and these taxa potentially mediate the above metabolic processes. In these two groups of ecosystems, a difference in the abundance of functional genes involved in carbohydrate metabolism, energy metabolism, glycan biosynthesis and metabolism, and metabolism of cofactors and vitamins significantly contribute to the distinct functional structure of microbiota from surface water. Furthermore, the microbe-mediated metabolic potentials for carbon, nitrogen and sulfur transformation showed differences in the two ecosystem groups. Compared with the mesotrophic-oligotrophic ecosystems, planktonic microbial communities in the eutrophic ecosystems showed higher potential for aerobic carbon fixation, fermentation, methanogenesis, anammox, denitrification, and sulfur mineralization, but they showed lower potential for aerobic respiration, CO oxidation, nitrogen fixation, and assimilatory sulfate reduction. This study offers insights into the relationships of trophic status to planktonic microbial community structure and its metabolic potential, and identifies the main taxa responsible for the biogeochemical cycles of carbon, nitrogen and sulfur in freshwater lake environments.