Autotrophic Microorganisms Research Articles

Modulation of Antioxidant Activity Enhances Photoautotrophic Cell Growth of Rhodobacter sphaeroides in Microbial Electrosynthesis

Global warming is currently accelerating due to an increase in greenhouse gas emissions by industrialization. Microbial electrosynthesis (MES) using electroactive autotrophic microorganisms has recently been reported as a method to reduce carbon dioxide, the main culprit of greenhouse gas. However, there are still few cases of application of MES, and the molecular mechanisms are largely unknown. To investigate the growth characteristics in MES, we carried out growth tests according to reducing power sources in Rhodobacter sphaeroides. The growth rate was significantly lower when electrons were directly supplied to cells, compared to when hydrogen was supplied. Through a transcriptome analysis, we found that the expression of reactive oxygen species (ROS)-related genes was meaningfully higher in MES than in normal photoautotrophic conditions. Similarly, endogenous contents of H2O2 were higher and peroxidase activities were lower in MES. The exogenous application of ascorbic acid, a representative biological antioxidant, promotes cell growth by decreasing ROS levels, confirming the inhibitory effects of ROS on MES. Taken together, our observations suggest that reduction of ROS by increasing antioxidant activities is important for enhancing the cell growth and production of CO2-converting substances such as carotenoids in MES in R. sphaeroides

Determination of the lower limits of antibiotic biodegradation and the fate of antibiotic resistant genes in activated sludge: Both nitrifying bacteria and heterotrophic bacteria matter

Antibiotics can be biodegraded in activated sludge via co-metabolism and metabolism. In this study, we investigated the biodegradation pathways of sulfamethoxazole (SMX) and antibiotic resistant genes’ (ARGs) fate in different autotrophic and heterotrophic microorganisms, by employing aerobic sludge, mixed sludge, and nitrifying sludge. A threshold concentration of SMX activating the degradation pathways in the initial stage of antibiotics degradation was found and proved in different activated sludge systems. Heterotrophic bacteria played an important role in SMX biodegradation. However, ammonia-oxidizing bacteria (AOB) had a faster metabolic rate, which was about 15 times higher than heterotrophic bacteria, contributing much to SMX removal via co-metabolism. As SMX concentration increases, the amoA gene and AOB relative abundance decreased in aerobic sludge due to the enrichment of functional heterotrophic bacteria, while it increased in nitrifying sludge. Microbial community analysis showed that functional bacteria which possess the capacity of SMX removal and antibiotic resistance were selected by SMX pressure. Potential ARGs hosts could increase their resistance to the biotoxicity of SMX and maintain system performance. These findings are of practical significance to guide antibiotic biodegradation and ARGs control in wastewater treatment plants.

Variability of the Sea Surface Microlayer Across a Filament’s Edge and Potential Influences on Gas Exchange

Major uncertainties in air-sea gas flux parameterizations may arise from a yet unpredictable sea surface microlayer (SML). Its influence on gas exchange is twofold as organic matter, in particular surfactants, on one side and organisms enriched in the SML on the other can alter air-sea gas fluxes. However, spatial heterogeneity of the SML and its potential consequences for gas exchange are not well understood. This study examines the SML’s surfactant pool and the dynamics of microbial enrichment across the sharp hydrological front of a newly upwelled filament off Mauritania. The front was marked by a distinct decrease in temperature and salinity compared to the stratified water column outside the filament. Distinct chemical and microbial SML properties were observed and associated with the filament. Overall, organic matter in the SML was significantly higher concentrated inside the filament and in equivalence to the underlying water. Degradation indices derived from total amino acids (TAA) composition indicated production of fresh organic matter inside and increased degradation outside the filament. Moreover, a shift in the microbial community was observed, for instance Synechococcus spp. prevailed outside the filament. Autotrophic and heterotrophic microorganisms preferably colonized the SML outside the filament. Organic matter enrichment in the SML depended largely on the chemical nature of biomolecules. Total organic carbon (TOC), total nitrogen and total combined carbohydrates were only slightly enriched while glucose, TAA and surfactants were considerably enriched in the SML. Surfactant concentration was positively correlated to TAA, in particular to arginine and glutamic acid, indicating that fresh organic matter components enhanced surface activity. Further, TOC and surfactant concentration correlated significantly (r2 = 0.47, p-value < 0.001). The lower limit of this linear correlation hits approximately the lowest TOC concentration expected within the global surface ocean. This suggests that surfactants are primarily derived from autochthonous production and most refractory components are excluded. Using a previously established relationship between surfactants and CO2 gas exchange (Pereira et al., 2018), we estimated that surfactants suppressed gas exchange by 12% inside the filament. This could be of relevance for freshly upwelled filaments, which are often supersaturated in greenhouse gases.

Biohydrometallurgy for Rare Earth Elements Recovery from Industrial Wastes.

Biohydrometallurgy recovers metals through microbially mediated processes and has been traditionally applied for the extraction of base metals from low-grade sulfidic ores. New investigations explore its potential for other types of critical resources, such as rare earth elements. In recent times, the interest in rare earth elements (REEs) is growing due to of their applications in novel technologies and green economy. The use of biohydrometallurgy for extracting resources from waste streams is also gaining attention to support innovative mining and promote a circular economy. The increase in wastes containing REEs turns them into a valuable alternative source. Most REE ores and industrial residues do not contain sulfides, and bioleaching processes use autotrophic or heterotrophic microorganisms to generate acids that dissolve the metals. This review gathers information towards the recycling of REE-bearing wastes (fluorescent lamp powder, spent cracking catalysts, e-wastes, etc.) using a more sustainable and environmentally friendly technology that reduces the impact on the environment.

Engineering microbial metabolic energy homeostasis for improved bioproduction

Metabolic energy (ME) homeostasis is essential for the survival and proper functioning of microbial cell factories. However, it is often disrupted during bioproduction because of inefficient ME supply and excessive ME consumption. In this review, we propose strategies, including reinforcement of the capacity of ME-harvesting systems in autotrophic microorganisms; enhancement of the efficiency of ME-supplying pathways in heterotrophic microorganisms; and reduction of unessential ME consumption by microbial cells, to address these issues. This review highlights the potential of biotechnology in the engineering of microbial ME homeostasis and provides guidance for the higher efficient bioproduction of microbial cell factories.

Microbial residues as the nexus transforming inorganic carbon to organic carbon in coastal saline soils

Soil inorganic carbon (SIC), including mainly carbonate, is a key component of terrestrial soil C pool. Autotrophic microorganisms can assimilate carbonate as the main or unique C source, how microorganisms convert SIC to soil organic carbon (SOC) remains unclear. A systematic field survey (n = 94) was performed to evaluate the shift in soil C components (i.e., SIC, SOC, and microbial residues) along a natural salinity gradient (ranging from 0.5 ‰ to 19 ‰), and further to explore how microbial necromass as an indicator converting SIC into SOC in the Yellow River delta. We observed that SIC levels linearly decreased with increasing salinity, ranging from ∼12 g kg−1 (salinity < 6 ‰) to ∼10 g kg−1 (salinity >6 ‰). Additionally, the concentrations of SOC and microbial residues exponentially decreased from salinity < 6 ‰ to salinity >6 ‰, with the decline of 39% and 70%, respectively. Microbial residues and SOC was tightly related to the variations in SIC. The structural equation model showed the causality on explanation of SOC variations with SIC through microbial residues, which can contribute 89% of the variance in SOC storage combined with SIC. Taken together, these two statistical analyses can support that microbial residues can serve as an indicator of SIC transition to SOC. This study highlights the regulation of microbial residues in SIC cycling, enhancing the role of SIC playing in C biogeochemical cycles and enriching organic C reservoirs in coastal saline soils.

Light‐Activated Biomedical Applications of Chlorophyll Derivatives

Back Cover: Chlorophyll derivatives can be extracted from plants, algae, and autotrophic microorganisms, and are gaining a lot of interest in nanotechnology. In fact, opportunely irradiated with light, they offer a multitude of photo-activated strategies for biomedical applications such as vision enhancement, optogenetics, antimicrobial and antitumor activities, and even generation of reactive oxygen species. This is reported by Carlotta Pucci, Chiara Martinelli, Andrea Degl'Innocenti, Andrea Desii, Daniele De Pasquale, and Gianni Ciofani in article number 2100181.

The principal eigenvalue for a time-space periodic reaction-diffusion-advection equation with delay nutrient recycling

In this paper, we propose and analyze a growth model of autotrophic microorganism, which is a time-space periodic reaction-diffusion-advection equation with delay nutrient recycling. First, by the linear chains technique, we transform the reaction-diffusion-advection model with a distributed delay into the equivalent system without distributed delay, then, we establish the existence of the principal eigenvalue of this system, it is a basic tool to study the reaction-diffusion-advection equation. Finally, some conclusions are given.

Dynamic biogeochemical cycling and mineralization of manganese of hydrothermal origin after the Marinoan glaciation

The aftermath of the Marinoan glaciation is an important period in the evolutionary history of Earth. Here we report on the dynamically biogeochemical cycling and organic mineralization processes of Mn in the Doushantuo Formation, Yangtze Block, South China, which was sourced hydrothermally during this time. This process occurred in an extensional tectonic setting as the water depth became shallower. Mn(+2) ascended with deep reducing hydrothermal fluids and accumulated in the form of Mn(+4) near the redox interface of locally oxidized water, which may be associated with metabolism by autotrophic microorganisms. Mn(+4) was reduced to Mn(+2), with organic matter acting as an electron donor during its degradation, which may be mediated by heterotrophic microorganisms. Mn(+2) in the water combined with CO32− generated by the oxidation and degradation of organic matter to form rhodochrosite. Algae and bacteria provided nucleation sites for the crystallization of rhodochrosite. Finally, spherical and ellipsoidal rhodochrosite with a biological structure and negative carbon isotope values (average δ13CPDB = −7.04‰) under the influence of Mn bacteria was formed. The input of hydrothermal material, mineralization involving the participation of organic matter, and mixed enrichment during syngenesis and syngenetic–early diagenetic stage were unique factors in the formation of Mn deposits in the Doushantuo Formation along the northern margin of the Yangtze Block. This represents the first report of Mn mineralization in carbonate form in the Ediacaran globally (Doushantuo Formation), and provides new insights into the biogeochemical cycling of Mn in the Ediacaran.

Modeling granule-based completely autotrophic nitrogen removal over the nitrite (CANON) process in an SBR

AbstractBased on the simplified activated sludge model No. 1 (ASM1), a 1D biofilm model containing autotrophic and heterotrophic microorganisms was developed to describe the microbial population dynamics and reactor dynamics of completely autotrophic nitrogen removal over the nitrite in sequencing batch reactor (CANON SBR). After sensitivity analysis and calibration for parameters, the simulation results of NH4+-N concentration and NO2−-N concentration were consistent with the measured results, while the simulated NO3−-N concentration was slightly lower than the measured. The simulation results showed that the soluble microbial products had an extremely low concentration. The aerobic ammonia oxidation bacteria and anaerobic ammonia oxidation bacteria were the dominant microbial populations of the CANON system, while nitrite oxidization bacteria and heterotrophic bacteria were eliminated completely. The optimal ratio of air aeration load to influent NH4+-N load was about 0.18 L air/mgN. The operating condition of the reactor was optimized according to the simulation results, and the total nitrogen removal rate and the total nitrogen removal efficiency increased from 0.312 ± 0.015 to 0.485 ± 0.013 kg N/m3/d and from 71.2 ± 4.3 to 85.7 ± 1.4%, respectively.

Transparent Exopolymer Particles (TEP), phytoplankton and picocyanobacteria a littoral-to-pelagic depth-gradient in a large subalpine lake

Transparent Exopolymer Particles (TEP) play an important role in the organic carbon cycle of many aquatic systems but the production and distribution of TEP have been studied mainly in the marine environment, neglecting the large oligotrophic lakes. We selected Lake Maggiore, one of the most important freshwater reserve in Northern Italy, to study the horizontal and vertical distribution of TEP and of its possible drivers. Samplings along a transect in the Borromeo basin were performed in May, July and September 2019. Total Organic Carbon (TOC), TEP, chlorophyll-a (Chl) of different algal groups, picocyanobacteria, bacteria and eukaryotes counting, were measured at six stations and five depths. Our study showed that TEP exhibited a clear vertical heterogeneity from surface to the bottom related to the autotrophic microorganisms that are the main source of TEP and are prevalent in the euphotic zone of the lake. On the other hand, TEP was fairly evenly distributed along the horizontal transect from littoral to pelagic zone, although patches were present in spring, when TEP concentrations were low. In contrast to TEP, TOC and to a lesser extent Chl and bacteria showed horizontal heterogeneity, in some months. In Lake Maggiore TEP indeed was an important fraction of Total Organic Carbon (TOC), making up to 54% of TOC (in carbon units: 910 µg C L-1) and it was significantly correlated with Chl. The highest TEP concentration (1.44 mg GX eq L-1) was measured in September 2019, in coincidence with an episode of superficial foam appearance. Considering the biomass as Chl concentrations, the algal group mostly related to TEP was that of brown algae, particularly diatoms; but considering the numbers, the picocyanobacteria and bacteria were more significantly correlated to TEP. The presence of pennate diatoms in May and July, with their TEP-related chlorophyll, did not produce TEP in as high concentration as that observed in September in the presence of centric diatoms and of very high numbers of picocyanobacteria and bacteria.

Species-specific isotope tracking of mercury uptake and transformations by pico-nanoplankton in an eutrophic lake

The present study aims to explore the bioaccumulation and biotic transformations of inorganic (iHg) and monomethyl mercury (MMHg) by natural pico-nanoplankton community from eutrophic lake Soppen, Switzerland. Pico-nanoplankton encompass mainly bacterioplankton, mycoplankton and phytoplankton groups with size between 0.2 and 20 μm. Species-specific enriched isotope mixture of 199iHg and 201MMHg was used to explore the accumulation, the subcellular distribution and transformations occurring in natural pico-nanoplankton sampled at 2 different depths (6.6 m and 8.3 m). Cyanobacteria, diatoms, cryptophyta, green algae and heterotrophic microorganisms were identified as the major groups of pico-nanoplankton with diatoms prevailing at deeper samples. Results showed that pico-nanoplankton accumulated both iHg and MMHg preferentially in the cell membrane/organelles, despite observed losses. The ratios between the iHg and MMHg concentrations measured in the membrane/organelles and cytosol were comparable for iHg and MMHg. Pico-nanoplankton demethylate added 201MMHg (~4 and 12% per day depending on cellular compartment), although the involved pathways are to further explore. Comparison of the concentrations of 201iHg formed from 201MMHg demethylation in whole system, medium and whole cells showed that 82% of the demethylation was biologically mediated by pico-nanoplankton. No significant methylation of iHg by pico-nanoplankton was observed. The accumulation of iHg and MMHg and the percentage of demethylated MMHg correlated positively with the relative abundance of diatoms and heterotrophic microorganisms in the pico-nanoplankton, the concentrations of TN, Mg2+, NO3−, NO2−, NH4+ and negatively with the concentrations of DOC, K+, Na+, Ca2+, SO42−. Taken together the results of the present field study confirm the role of pico-nanoplankton in Hg bioaccumulation and demethylation, however further research is needed to better understand the underlying mechanisms and interconnection between heterotrophic and autotrophic microorganisms.

High diversity of microalgae as a tool for the synthesis of different silver nanoparticles: A species-specific green synthesis

Autotrophic microorganisms can be useful for the green synthesis of nanoparticles (NPs), but there is a lack of knowledge to affirm if the high variety of microorganisms is connected to a potential high diversity of NPs. Here, aqueous extracts of two cyanobacteria (Synechococcus elongatus and Microcystis aeruginosa) and four microalgae (the chlorophytes Coelastrum astroideum and Desmodesmus armatus; and the charophytes Cosmarium punctulatum and Klebsormidium flaccidum) were used for the biosynthesis of silver nanoparticles (AgNPs). The nanoparticle characterization was performed by UV–Visible absorption spectrum, Fourier Transforms Infrared (FT-IR), Transmission Electron Microscopy (TEM) and Energy Dispersive X-Ray Spectroscopy (EDS). This is the first study trying to establish some connection between the taxonomical diversity of microalgae and cyanobacteria and the synthesis of different silver nanoparticles. All algal and cyanobacterial extracts resulted in the synthesis of well-disperse and crystalline AgNPs, with no agglomerate formation. TEM analysis showed spherical AgNPs shape with size range within 1.8–5.4 nm. FTIR analysis demonstrated the presence of hydroxyl groups of peptidoglycan nature acting as stabilizing agents in the surface of the AgNPs. The nanoparticle shape and kind of stabilizing biomolecules were highly similar, but their size was significantly different, which can affect the NP properties. There was no pattern for the AgNPs in terms of the microorganism phyla. Our results showed a very high potential for the use of cyanobacteria and microalgae in the green synthesis of NPs since the variety of AgNPs obtained was species-specific.

The Toxic Effects of Antibiotics on Freshwater and Marine Photosynthetic Microorganisms: State of the Art

Antibiotic residues have been commonly detected worldwide in freshwater, estuarine, and marine ecosystems. The review summarizes the up-to-date information about the toxic effects of over 60 antibiotics on nontarget autotrophic microorganisms with a particular focus on marine microalgae. A comprehensive overview of the available reports led to the identification of significant knowledge gaps. The data on just one species of freshwater green algae (Raphidocelis subcapitata) constitute 60% of the total information on the toxicity of antibiotics, while data on marine species account for less than 14% of the reports. Moreover, there is a clear knowledge gap regarding the chronic effects of antibiotic exposure (only 9% of studies represent exposition time values longer than 7 days). The review summarizes the information on different physiological endpoints, including processes involved in photosynthesis, photoprotective and antioxidant mechanisms. Currently, the hazard assessment is mostly based on the results of the evaluation of individual chemicals and acute toxicity tests of freshwater organisms. Future research trends should involve chronic effect studies incorporating sensitive endpoints with the application of environmentally relevant concentrations, as well as studies on the mixture effects and combined environmental factors influencing toxicity.

The removal performance of nitrates in the novel 3D-BERS with GAC and diversity of immobilized microbial communities treating nitrate-polluted water: Effects of pH and COD/NO3--N ratio

In this work, a three-dimensional bioelectrochemical reactor system (3D-BERs) with granular activated carbon (GAC) was utilized to study the feasibility of simultaneous removal of nitrates by autotrophic-heterotrophic denitrification process under different pH levels. In this present study, it was found that when the influent COD/ NO3--N ratio ranged between 1.5 and 3.5, both autotrophic and heterotrophic denitrifying microorganisms played an important role in denitrification. The experimental results demonstrated that the highest removal efficiency of nitrates under the optimum COD/NO3--N ratio of 1.5 (98.62%) was achieved with an initial pH of 7.5 ± 0.4. Likewise, when the COD/NO3--N ratio of 3.5, the nitrates removal efficiency (81.12%) was achieved with an initial pH of 8.2 ± 0.3, respectively. Batch denitrification processes followed zero-order kinetics at various NO3--N concentrations obtained. The bacterial community structure and relative abundance of bacteria changed at the level of genes and the phylum of immobilized GAC particles. Moreover, the diversity of bacterial composition enhanced the removal of NO3--N at the inner surface (IS), and bottom surface (BS) of immobilized GAC carriers were Gammaproteobacteria, Bacilli, Proteobacteria, and Thauera. In general, this technique is more effective for enhancing the denitrification process in the 3D-BER system.

Biological and chemical characterization of new isolated halophilic microorganisms from saltern ponds of Trapani, Sicily

Halophilic microorganisms inhabiting hypersaline environments such as salt lakes, Dead Sea, or salt evaporation ponds, have acquired specific cell adaptation to grow within stressful conditions. In this study, we isolated heterotrophic and autotrophic microorganisms from several saltern ponds located at the Natural Reserve “Saline di Trapani e Paceco”, Sicily, Italy. The aim of the study was to investigate the biotechnological potential of new microbial strains from saltern ponds, by capturing their biological and chemical diversity. After the isolation and identification of the sampled strains, their growth capacity was determined under low and high salinity conditions. The metabolomic profiles of heterotrophs and pigments production of photosynthetic organisms were analyzed. In parallel, antiproliferative tests on human cell lines were conducted with total extracts coming from the microorganism cultures, together with repair activity assessment of non-cytotoxic extracts. Some of the isolated strains were found to synthetize known bioactive molecules and to exert bioactivity on human cells. In particular, the high salinity increases cell repair activity, probably due to an higher production of antioxidants pigments (e.g. lutein and fucoxanthin) from photosynthetic microorganisms; same culture condition augment also concentration of molecules with interesting bioactivities, such as ectoine, betaine, trigonelline, amino acids and oxiglutathione from heterotrophic microorganisms. In conclusion, this work represents the first study on the isolation of halophilic microorganisms populating the ‘Trapani-Paceco’ saltern and shows how an interdisciplinary investigation based on marine microbiology, cell biology, and modern metabolomics can disclose their biotechnological potential.

Process Engineering Aspects for the Microbial Conversion of C1 Gases.

Industrially applied bioprocesses for the reduction of C1 gases (CO2 and/or CO) are based in particular on (syn)gas fermentation with acetogenic bacteria and on photobioprocesses with microalgae. In each case, process engineering characteristics of the autotrophic microorganisms are specified and process engineering aspects for improving gas and electron supply are summarized before suitable bioreactor configurations are discussed for the production of organic products under given economic constraints. Additionally, requirements for the purity of C1 gases are summarized briefly. Finally, similarities and differences in microbial CO2 valorization are depicted comparing gas fermentations with acetogenic bacteria and photobioprocesses with microalgae.

A Novel Enrichment Culture Highlights Core Features of Microbial Networks Contributing to Autotrophic Fe(II) Oxidation Coupled to Nitrate Reduction

Fe(II) oxidation coupled to nitrate reduction (NRFO) has been described for many environments. Yet very few autotrophic microorganisms catalysing NRFO have been cultivated and their diversity, as well as their mechanisms for NRFO in situ remain unclear. A novel autotrophic NRFO enrichment culture, named culture BP, was obtained from freshwater sediment. After more than 20 transfers, culture BP oxidized 8.22 mM of Fe(II) and reduced 2.42 mM of nitrate within 6.5 days under autotrophic conditions. We applied metagenomic, metatranscriptomic, and metaproteomic analyses to culture BP to identify the microorganisms involved in autotrophic NRFO and to unravel their metabolism. Overall, twelve metagenome-assembled genomes (MAGs) were constructed, including a dominant Gallionellaceae sp. MAG (≥71% relative abundance). Genes and transcripts associated with potential Fe(II) oxidizers in culture BP, identified as a Gallionellaceae sp., Noviherbaspirillum sp., and Thiobacillus sp., were likely involved in metal oxidation (e.g., cyc2, mtoA), denitrification (e.g., nirK/S, norBC), carbon fixation (e.g., rbcL), and oxidative phosphorylation. The putative Fe(II)-oxidizing protein Cyc2 was detected for the Gallionellaceae sp. Overall, a complex network of microbial interactions among several Fe(II) oxidizers and denitrifiers was deciphered in culture BP that might resemble NRFO mechanisms in situ. Furthermore, 16S rRNA gene amplicon sequencing from environmental samples revealed 36 distinct Gallionellaceae taxa, including the key player of NRFO from culture BP (approx. 0.13% relative abundance in situ). Since several of these in situ-detected Gallionellaceae taxa were closely related to the key player in culture BP, this suggests that the diversity of organisms contributing to NRFO might be higher than currently known.

Solar-Powered Carbon Fixation for Food and Feed Production Using Microorganisms-A Comparative Techno-Economic Analysis.

This study evaluates the techno-economic feasibility of five solar-powered concepts for the production of autotrophic microorganisms for food and feed production; the main focus is on three concepts based on hydrogen-oxidizing bacteria (HOB), which are further compared to two microalgae-related concepts. Two locations with markedly different solar conditions are considered (Finland and Morocco), in which Morocco was found to be the most economically competitive for the cultivation of microalgae in open ponds and closed systems (1.4 and 1.9 € kg–1, respectively). Biomass production by combined water electrolysis and HOB cultivation results in higher costs for all three considered concepts. Among these, the lowest production cost of 5.3 € kg–1 is associated with grid-assisted electricity use in Finland, while the highest production cost of >9.1 € kg–1 is determined for concepts using solely photovoltaics and/or photoelectrochemical technology for on-site electricity production and solar-energy conversion to H2 by water electrolysis. All assessed concepts are capital intensive. Furthermore, a sensitivity analysis suggests that the production costs of HOB biomass can be lowered down to 2.1 € kg–1 by optimization of the process parameters among which volumetric productivity, electricity strategy, and electricity costs have the highest cost-saving potentials. The study reveals that continuously available electricity and H2 supply are essential for the development of a viable HOB concept due to the capital intensity of the needed technologies. In addition, volumetric productivity is the key parameter that needs to be optimized to increase the economic competitiveness of HOB production.

Recent Advances in Developing Artificial Autotrophic Microorganism for Reinforcing CO2 Fixation.

With the goal of achieving carbon sequestration, emission reduction and cleaner production, biological methods have been employed to convert carbon dioxide (CO2) into fuels and chemicals. However, natural autotrophic organisms are not suitable cell factories due to their poor carbon fixation efficiency and poor growth rate. Heterotrophic microorganisms are promising candidates, since they have been proven to be efficient biofuel and chemical production chassis. This review first briefly summarizes six naturally occurring CO2 fixation pathways, and then focuses on recent advances in artificially designing efficient CO2 fixation pathways. Moreover, this review discusses the transformation of heterotrophic microorganisms into hemiautotrophic microorganisms and delves further into fully autotrophic microorganisms (artificial autotrophy) by use of synthetic biological tools and strategies. Rapid developments in artificial autotrophy have laid a solid foundation for the development of efficient carbon fixation cell factories. Finally, this review highlights future directions toward large-scale applications. Artificial autotrophic microbial cell factories need further improvements in terms of CO2 fixation pathways, reducing power supply, compartmentalization and host selection.