Anaerobic Environment Research Articles

Seasonal variation regulate the endogenous phosphorus release in sediments of Shijiuhu Lake via water-level fluctuation

Freshwater lakes undergo substantial alterations of the phosphorus (P) cycle in the water-sediment ecosystem due to thermal change. The impact process of seasonal fluctuation on P cycling in sediments has been scarcely investigated. P forms in sediments from a freshwater lake in China were analyzed using sequential extraction technique. The vertical distribution of soluble reactive P (SRP), Fe2+, and S2− in the interstitial water was measured using diffusion gradient technique (DGT). Fick's Law and DIFS model were used to obtain the diffusion fluxes of SRP and the kinetic parameters in the water-sediment system. The results showed that total P (TP) concentrations in the solid sediments varied from 207.5, 266.6 and 130.3 mg/kg to 614.7, 1053.1, and 687.6 mg/kg in winter, spring, and summer, respectively. The concentrations of individual P forms in spring were higher than those in other seasons, with Fe-bound P (Fe–P) concentration being the highest across all seasons. Notably, significant variations of SRP concentrations were found in the interstitial water between sedimentary depths of approximately 2 cm and 6 cm, particularly in the summer. Furthermore, higher diffusion fluxes of SRP through the interface were found in summer. A stable anaerobic environment failed to develop in spring with high water level, preventing the desorption of solid Fe–P and diffusion of Fe2+ into the water due to the afflux and deposition of P-containing particulate into deeper sediment layers along with organic material. Under extreme high-temperature in summer, decreased rainfall and rising temperatures boosted the activity of aquatic organisms in the water, thereby reducing P fixation by sediments and leading to P release. This process increased the risk of P excess and potential eutrophication in the water. Generally, clarifying the resupplying processes of endogenous P in sediment systems experiencing seasonal variations is critical for eutrophication management of lakes.

Unboxing the treasure chest: tinkering proteins beyond the natural repertoire

Proteins are the molecular machineries of life, and engineering them in order to probe and tailor biological function has long remained pure imagination. Cracking the genetic code, the blueprint of proteins, gave the spark to turn precise protein engineering into reality, and even to explore new designer genetic codes. Organisms in all kingdoms of life evolved a highly similar genetic code, which defines how genetic information is translated into proteins. Only a small set of 20 so-called canonical amino acids are used by ribosomes to build proteins. Is the genetic code in this form key to all lives, no matter where in the universe it evolved? Already on Earth we find two powerful exceptions. Selenocysteine represents the 21st canonical amino acid and can even be found in some human proteins. Pyrrolysine is termed the 22nd proteogenic amino acid and has been identified, e.g., in archaeal organisms that grow in anaerobic environments, such as the sludge of a lake or the paunch of a cow. So if one could expand the genetic code even further, proteins could be generated consisting partially or even entirely of artificial amino acid polymers, giving rise to a large diversity of novel natural and unnatural functions. In fact, this future is already present, with genetic code expansion representing a powerful technique which allows to equip proteins with hundreds of non-canonical amino acids, including ones that do not exist in nature. This opens a treasure chest of entirely new protein structures and functionalities. Despite the great potential for biotechnology and medicine, installing a new genetic code, especially in human cells, still bears major challenges. Our laboratory, among others, strives to develop new strategies to expand the genetic code inside of living cells and, at the same time, maintain their native genetic code. Come and join us for this brief journey through the milestones of protein engineering, up to the latest breakthroughs in encoding non-natural chemical properties, and you may get as excited as we are about where protein engineering is heading in the upcoming years.

Respiration-driven methanotrophic growth of diverse marine methanogens

Anaerobic marine environments are the third largest producer of the greenhouse gas methane. The release to the atmosphere is prevented by anaerobic 'methanotrophic archaea (ANME) dependent on a symbiotic association with sulfate-reducing bacteria or direct reduction of metal oxides. Metagenomic analyses of ANME are consistent with a reverse methanogenesis pathway, although no wild-type isolates have been available for validation and biochemical investigation. Herein is reported the characterization of methanotrophic growth for the diverse marine methanogens Methanosarcina acetivorans C2A and Methanococcoides orientis sp. nov. Growth was dependent on reduction of either ferrihydrite or humic acids revealing a respiratory mode of energy conservation. Acetate and/or formate were end products. Reversal of the well-characterized methanogenic pathways is remarkably like the consensus pathways for uncultured ANME based on extensive metagenomic analyses.

Diversity and functional annotation of microorganisms in anaerobic chamber treating nitrate-rich wastewater.

The vertical flow constructed wetlands (VFCW) for the treatment of domestic wastewater has become a conventional and cost effective treatment system with one of the major disadvantage of elevated nitrate concentrations. The present study makes an effort in providing a new design of anaerobic denitrification unit termed as anaerobic chamber (AC) whichwas introduced after two-stage VFCW to remove nitrates from the treated wastewater (WW). The AC provided all the essential conditions of effective denitrification such as anaerobic environment with enough carbon and nitrogen source. To understand the pollutant removal mechanism in AC, microbial diversity and functional annotation was studied by metagenomic analysis of sequences obtained from biofilm formed in AC. The efficiency of AC was measured with respect to physicochemical wastewater quality parameters. The removal efficiencies were 88, 65, 43 and 27% for total nitrogen, nitrate (NO3), ammoniacal-nitrogen (NH4) andortho-phosphate respectively. The microbial flora was much more diverse and unique pertaining to anaerobic microbes in AC compared to WW with total of 954 and 1191 genuses respectively with minimum abundance of 10 hits. The metagenomes exhibited 188% more Archaea in the AC than WW where Crenarchaeota, Euryarchaeota, Korarchaeota, Nanoarchaeota and Thaumarchaeota were major phyla with 60 genuses. The nitrogen metabolism was reported in terms of assimilatory nitrate reductase. As the class, Proteobacteria, Actinobacteria were prominent in WW, whereas Proteobacteria, Chloroflexi in AC were abundant. From functional annotation of sequences, the microbial flora in AC has the potential of removal of pollutants present in the form of carbon, nitrogen, and phosphorus.

Radon exhalation characteristics after pyrolysis of long flame coal

Coal pyrolysis is a important method for classifying and utilizing coal resources and contributes to enhanced comprehensive resource utilization. However, In high-temperature areas such as coal pyrolysis, there is an abnormal phenomenon release of radioactive gas radon, understanding the relationship between temperature and radon exhalation characteristics, as well as the underlying mechanisms, holds great importance for assessing radon pollution in mining areas. After coal undergoes pyrolysis under high temperature conditions, its material composition, pore structure, water content, and other properties have changed. The pyrolysis products in different atmosphere environments have differences, and the characteristics of radon emission are also different. To address this, the present study conducted coal pyrolysis experiments in both aerobic and anaerobic environments, using long flame coal sourced from Yulin, China. The radon release concentration of the pyrolysis products was measured. The research findings indicate that during pyrolysis at elevated temperatures, the ratio of coal mass loss is constantly increasing. High temperatures promote the development of pores and fissures, and significant changes in coal properties at temperature thresholds (300 °C and 500 °C). The specific surface area, pore volume, and fracture ratio all display substantial increases, and the amplitude of change is greater under aerobic conditions. The fractal dimension of total pores and macropores shows continuous growth, while the specific surface area, pore volume, and fracture ratio exhibit a strong negative correlation with the radon emission rate of pyrolysis products. The expansion and penetration of pores and cracks, along with the release of a substantial amount of pyrolysis gas, accelerate the transformation, migration, and exhalation of radon, resulting in a negative correlation between the heat treatment temperature and the radon release rate of pyrolysis products. Under aerobic conditions, the radon release rate of pyrolysis products decreases more significantly.

Biodegradation of nitrate and p-bromophenol using hydrogen-based membrane biofilm reactors in parallel

ABSTRACT P-bromophenol (4-BP) is a toxic halogenated phenolic organic compound. The conventional treatment processes for 4-BP elimination are costly and inefficient, with complete mineralization remaining a challenge for water treatment. To overcome these limitations, we investigated the treatment of 4-BP in a membrane biofilm reactor (MBfR) using hydrogen as an electron donor. The pathway of 4-BP degradation within the H2-MBfR was investigated through long-term operational experiments by considering the effect of nitrate and 4-BP concentrations, hydrogen partial pressure, static experiments, and microbial community diversity, which was studied using 16S rRNA. The results showed that H2-MBfR could quickly remove approximately 100% of 4-BP (up to 20 mg/L), with minimal intermediate product accumulation and 10 mg/L of nitrate continuously reduced. The microbial community structure showed that the presence of H2 created an anaerobic environment, and Thauera was the dominant functional genus involved in the degradation of 4-BP. The genes encoding related enzymes were further enhanced. This study provides an economically viable and environmentally friendly bioremediation technique for water bodies that contain 4-BP and nitrates.

Enhanced nitrogen removal from micro-polluted water by Fe (II)/Fe (III) cycling under intermittent aeration

The potential of iron-carbon materials (FeC) as inorganic electron donors for aerobic denitrification of micro-polluted source water was explored. For this purpose, a raw water denitrification experiment was conducted using FeC under intermittent aeration condition. Then, magnetite was added as a biological carrier to construct another system, FeC and magnetite intermittent aeration reaction system, (FCMI). The findings revealed that FCMI notably removed the pollutants with the removal efficiencies of nitrate, total nitrogen, total phosphorus, and chemical oxygen demand reaching 95.63%, 88.62%, 90.48%, and 61.46%, respectively. Cycling between aerobic and anaerobic environments facilitated the formation of Fe (II)/Fe (III) cycle within FeC materials. Microbial profiling revealed that Proteobacteria and Actinobacteria comprised 97.14% of the total abundance in FCMI. Iron-reducing bacteria and aerobic denitrifying bacteria were found to thrive on the surface of magnetite materials. The abundance of enzymes related to denitrification under intermittent aeration exceeded those under continuous aeration levels by 8–19%. This study verifies the ability of iron electrons to cycle under intermittent aeration condition and proposes a novel strategy for in-situ denitrification of micro-polluted source water.

Unveiling the Biochar-Respiratory Growth of Methanosarcina acetivorans Involving Extracellular Polymeric Substances.

Biochar can be applied to diverse natural and engineered anaerobic systems. Biochar plays biogeochemical roles during its production, storage, and environmental dynamics, one of which is related to the global methane flux governed by methanotrophs and methanogens. Our understanding of relevant mechanisms is currently limited to the roles of biochar in methanotrophic growth, but less is known about the roles of biochar in methanogenic growth. Here, we demonstrated that biochar enhanced the methanogenic growth of a model methanogen, Methanosarcina acetivorans, and the role of biochar as an electron acceptor during methanogenic growth was confirmed, which is referred to as biochar-respiratory growth. The biochar-respiratory growth of M. acetivorans promoted the secretion of extracellular polymeric substances (EPS) with augmented electron transfer capabilities, and the removal of EPS significantly attenuated extracellular electron transfer. Identification and quantification of prosthetic cofactors for EPS suggest an important role of flavin and F420 in extracellular electron transfer. Transcriptomic analysis provided additional insights into the biochar-respiratory growth of M. acetivorans, showing that there was a positive response in transcriptional regulation to the favorable growth environment provided by biochar, which stimulated global methanogenesis. Our results shed more light on the in situ roles of biochar in the ecophysiology of methanogens in diverse anaerobic environments.

Enhancement of anaerobic ammonia oxidation process composed of mixed sludge without additional deoxidation by sulfur autotrophic denitrification under mainstream conditions

The practical application of anaerobic ammonia oxidation (anammox) process is hindered because of its strict demand of an anaerobic environment. Due to the slow growth cycle of anammox bacteria and the high cost of wastewater deoxidation, it is difficult to improve the contribution rate of denitrification in anammox pathway. Sulfur oxidizing bacteria (SOB) consume oxygen in the process of oxidizing sulfur elements to provide a better anaerobic environment for anammox bacteria, and sulfur autotrophic denitrification can also remove nitrate produced during the anammox process for deep nitrogen removal. The analysis of cell hydrophobicity and EPS secondary structure were consistent, which showed that the biofilm of A-SAD (anammox- sulfur autotrophic denitrification) system exhibited stronger adhesion and a more stable structure. The functional genes of ammonia oxidation (amoA) and nitrite oxidation (nxrA) were reduced by more than 90 %, implying that SAD provided a favorable anaerobic environment for anammox and reduced the cost of deoxidation in actual operation. The relative abundance of Candidatus_Kuenenia increased nearly threefold, becoming the dominant anammox bacteria in low substrate environment, while other anammox bacteria almost disappeared. The increase of the relative abundance of Thiobacillus and Desulfovibrio were beneficial to the transformation of S0 into bio-sulfur (Bio-S0) through redox, which provided the possibility for the recovery and utilization of sulfur. This experiment provides a comprehensive understanding of the nitrogen and sulfur conversion mechanism for the deoxidation and sulfur recovery of anammox in practical applications.

(Invited) Green Hydrogen R&D in South Africa

For decades, proton-exchange membrane (PEM) water electrolysis (WE) has been used mainly for oxygen generation in anaerobic environments. Over the past two decades, however, it has been increasingly used for hydrogen generation in the industrial sector at various and increasing scale. The PEMWE technology is also considered as a key one in the frame of the ongoing energy transition if the process of hydrogen generation by means of WE is linked to renewable energy sources, such as wind, solar, etc.Among other existing water electrolysis technologies, such as alkaline, solid oxide, the technology based on proton-exchange membranes has received a great deal of interest in South Africa. One of the reasons is endowment of South Africa with its PGM resources, such as platinum (Pt) and iridium (Ir) that are used in PEM water electrolysis (WE) catalytic components. As it is known, PEMWE technology is very well suited to accommodate intermittency of energy supply associated with renewables. PEMWE technology can also deliver relatively high-pressure hydrogen gas of high purity. South Africa has also superior endowment of both onshore wind and solar. It is known thar renewable energy (RE) is one of the largest operational cost components in the production of green hydrogen. Other factors contributing to the interest in green hydrogen water electrolysis technology in South Africa that are not obvious, but important, include large tracts of sparsely populated land with little alternative use, which can be dedicated for RE production. South Africa also has a suitable geographical position with deep water ports for the potential export of large quantity of hydrogen and its derivatives such as ammonia.Approximately 15 years ago South African Government approved national program HySA: Hydrogen South Africa that resulted in developing expertise and capacity to conduct research, development, and earlier commercial activities around green hydrogen production by means of water electrolysis. These activities include development of local IP at the components, stack and system levels. Recently, a number of “catalytic” projects have been identified in order to increase a demand in green hydrogen and stimulate investments.Recently, an international R&D project between South Africa and Japan was launched to develop further expertise in both green hydrogen and ammonia technologies [1]. Most recently, large companies, such as SASOL, made commitments to lead green hydrogen production at a large scale for the variety of applications, aiming at decarbonisation of mining and petrochemical sectors [2]. On the Governmental level, South Africa recently has approved its national hydrogen road map [3].This talk will provide a comprehensive update on the research, technology, and commercialisation activities in South Africa in the area of green hydrogen production.

Novel bio-degradation shortcut for the treatment of acrylonitrile-containing wastewater using column bio-oxidation with Sulfurovum bacteria in activated sludge

Currently, there is a paucity of research focused on the column bio-oxidation of organic wastewater containing acrylonitrile. Consequently, it is imperative and meaningful to investigate the application of column bio-oxidation for the treatment of this specific type of wastewater. To initiate the study, microorganisms were enriched from activated sludge obtained from a chemical plant. These microorganisms were subsequently acclimated by introducing essential nutrients and optimizing reaction conditions such as the liquid-to-solid ratio, oxygen concentration, pH, and temperature. The resulting microbial consortium was then evaluated for its capacity to degrade acrylonitrile. The results show that at the solid to liquid ratio 3:40 (g/L), anaerobic environment (O2<5%), pH 7.5, 30 °C, nutrients (glucose 5 g, MgSO4·7H2O 0.5 g, KH2PO4 1.0 g, KNO3 1.0 g) and hydraulic retention time 96 h. The average removal rate of acrylonitrile can reach 86.95 %. The evolution of the microbial community was characterized by 16S rRNA gene analysis. It revealed that Sulfurovum gradually replaced other microorganisms as the dominant species over time in the response. In conjunction with the monitoring of elemental nitrogen during the reaction, it was found that Sulfurovum showed a two-step pathway in the process. In the first stage, Sulfurovum converted acrylonitrile as the nitrogen source to R-COOH and produced NH3/NH4- in the presence of acrylonitrile. In the second stage, Sulfurovum used exceed NO3- as the nitrogen source, enabled the nitrogen cycle to proceed.

Microbial communities related to the sulfur cycle in the Sansha Yongle Blue Hole.

The Sansha Yongle Blue Hole (SYBH), the deepest blue hole in the world, is an excellent habitat for revealing biogeochemical cycles in the anaerobic environment. However, how sulfur cycling is mediated by microorganisms in the SYBH hasn't been fully understood. In this study, the water layers of the SYBH were divided into oxic zone, hypoxic zone, anoxic zone I and II, and microbial-mediated sulfur cycling in the SYBH was comprehensively interpreted. The 16S rRNA genes/transcripts analyses showed that the microbial community structures associated with the sulfur cycling in each zone had distinctive features. Sulfur-oxidizing bacteria were mostly constituted by Gammaproteobacteria, Alphaproteobacteria, Campylobacterota, and Chlorobia above the anoxic zone I and sulfate-reducing bacteria were dominated by Desulfobacterota in anoxic zones. Metagenomic analyses showed that the sulfide-oxidation-related gene sqr and genes encoding the Sox system were mainly distributed in the anoxic zone I, while genes related to dissimilatory sulfate reduction and sulfur intermediate metabolite reduction were mainly distributed in the anoxic zone II, indicating different sulfur metabolic processes between these two zones. Moreover, sulfur-metabolism-related genes were identified in 81 metagenome-assembled genomes (MAGs), indicating a high diversity of microbial communities involved in sulfur cycling. Among them, three MAGs from the candidate phyla JdFR-76 and AABM5-125-24 with genes related to dissimilatory sulfate reduction exhibited distinctive metabolic features. Our results showed unique and novel microbial populations in the SYBH sulfur cycle correlated to the sharp redox gradients, revealing complex biogeochemical processes in this extreme environment. IMPORTANCE Oxygen-deficient regions in the global ocean are expanding rapidly and affect the growth, reproduction and ecological processes of marine organisms. The anaerobic water body of about 150 m in the Sansha Yongle Blue Hole (SYBH) provided a suitable environment to study the specific microbial metabolism in anaerobic seawater. Here, we found that the vertical distributions of the total and active communities of sulfur-oxidizing bacteria (SOB) and sulfate-reducing bacteria (SRB) were different in each water layer of the SYBH according to the dissolved oxygen content. Genes related to sulfur metabolism also showed distinct stratification characteristics. Furthermore, we have obtained diverse metagenome-assembled genomes, some of which exhibit special sulfur metabolic characteristics, especially candidate phyla JdFR-76 and AABM5-125-24 were identified as potential novel SRB. The results of this study will promote further understanding of the sulfur cycle in extreme environments, as well as the environmental adaptability of microorganisms in blue holes.

Deciphering the role of polystyrene microplastics in waste activated sludge anaerobic digestion: Changes of organics transformation, microbial community and metabolic pathway

Microplastics are ubiquitous in the natural environment, which inevitably affect the relevant biochemical process. Nevertheless, the knowledge about the impacts of microplastics on organics transformation and corresponding microbial metabolism response in anaerobic environment is limited. Here, polystyrene (PS) microplastics were selected as model microplastics to explore their potential impacts on organics transformation, microbial community and metabolic pathway during sludge anaerobic digestion system operation. The results indicated that the PS microplastics exhibited the dose-dependent effects on methane production, i.e., the additive of 20–40 particles/g TS of PS microplastics improved the maximum methane yield by 3.38 %–8.22 %, whereas 80–160 particles/g TS additive led to a 4.78 %–11.04 % declining. Overall, PS microplastics facilitated the solubilization and hydrolysis of sludge, but inhibited the acidogenesis process. Key functional enzyme activities were stimulated under low PS microplastics exposure, whereas were almost severely inhibited due to the increased oxidative stress induced from excess PS microplastics. Microbial community and further metabolic analysis indicated that low PS microplastics improved the acetotrophic and hydrogenotrophic methanogenesis, while a high level of PS microplastics shifted methanogenesis from acetotrophic to hydrogenotrophic pathway. Further analysis showed that the reacted PS microplastics exhibited greater toxicity and ecological than the raw PS microplastics due to that they are more likely to adsorb contaminants. These findings revealed the dosage-dependent relationships between microplastics and organics transformation process in anaerobic environments, providing new insights for assessing the impact of PS microplastics on sludge anaerobic digestion.

Formate production is dispensable for Haemophilus ducreyi virulence in human volunteers.

Haemophilus ducreyi is a causative agent of cutaneous ulcers in children who live in the tropics and of the genital ulcer disease chancroid in sexually active persons. In the anaerobic environment of abscesses and ulcers, anaerobic respiration and mixed acid fermentation (MAF) can be used to provide cellular energy. In Escherichia coli, MAF produces formate, acetate, lactate, succinate, and ethanol; however, MAF has not been studied in H. ducreyi. In human challenge experiments with H. ducreyi 35000HP, transcripts of the formate transporter FocA and pyruvate formate lyase (PflB) were upregulated in pustules compared to the inocula. We made single and double mutants of focA and pflB in 35000HP. Growth of 35000HPΔfocA was similar to 35000HP, but 35000HPΔpflB and 35000HPΔfocA-pflB had growth defects during both aerobic and anaerobic growth. Mutants lacking pflB did not secrete formate into the media. However, formate was secreted into the media by 35000HPΔfocA, indicating that H. ducreyi has alternative formate transporters. The pH of the media during anaerobic growth decreased for 35000HP and 35000HPΔfocA, but not for 35000HPΔpflB or 35000HPΔfocA-pflB, indicating that pflB is the main contributor to media acidification during anaerobic growth. We tested whether formate production and transport were required for virulence in seven human volunteers in a mutant versus parent trial between 35000HPΔfocA-pflB and 35000HP. The pustule formation rate was similar for 35000HP (42.9%)- and 35000HPΔfocA-pflB (62%)-inoculated sites. Although formate production occurs during in vitro growth and focA-pflB transcripts are upregulated during human infection, focA and pflB are not required for virulence in humans.

Influence of sulfate reducing bacteria cultured from the paddy soil on the solubility and redox behavior of Cd in a polymetallic system

As a toxic heavy metal, cadmium (Cd) easily enters into rice while rice grains greatly contribute to the dietary Cd intake in the populations consuming rice as a staple food. The availability of Cd in paddy soil determines the accumulation of grain Cd. Soil drainage leads to the remobilization of Cd, increasing bioavailability of Cd. In contrast, soil flooding results in little contribution of soil Cd to grain Cd, which is generally attributed to sulfate reduction induced by sulfate-reducing bacteria (SRB) in paddy soils. However, effects of SRB cultured from the paddy soil on the solubility and redox behavior of Cd have been seldom investigated before. Here, we used SRB enrichment cultures to investigate the temporal dynamics of Cd2+. The results showed that SRB enrichment cultures efficiently reduced solution redox potential (Eh) to less than −100 mV and gradually increased pH to neutral, demonstrating their ability to create a good anaerobic environment. The solubility of Cd obviously decreased in the anaerobic phase and Cd2+ was transformed into poorly dissolved CdS near the SRB cell wall edge. The addition of Zn2+ and/or Fe2+ further improved the decrease in Cd solubility and facilitated the formation of polymetallic sulfides as a consequence of promoting the production of S0 and dissolved sulfides (S2−/HS−) and the transformation of S0 into S2−/HS−. Little of Cd was detected in the media upon reoxidation, which was probably due to the high pH and the interaction between CdS and ZnS/FeS. Conclusively, these results demonstrate the detailed dynamic processes that explain the essential role of SRB in regulating the redox dynamics of chalcophile heavy metals and their bioavailability in paddy soils.

Effect of chloride and bicarbonate ions on corrosion behavior of carbon steel in anaerobic environment

This investigation was initiated to study the influence of chloride ions and bicarbonate ions on the corrosion behavior of Q345 carbon steel in anaerobic condition by electrochemical tests and surface characterizations. It was found that low concentration of Cl- tends to cause general corrosion of sample while high concentration of Cl- induces localized corrosion because of its migration to the corrosion defects, leading to the accelerated dissolution of matrix. The existence of individual HCO3- results in the passivation of sample. When Cl- co-exists in the solution, the increase concentration of HCO3- results in an overall decrease of corrosion pit depth and the disappearance of localized corrosion, revealing the inhibitory effect of HCO3- on corrosion due to the formation of dense FeCO3 film. This corrosion suppression behavior of HCO3- is opposite to its synergistic effect on pitting with Cl- in aerobic environment.

Geochemical Characteristics of Elements and Main Controlling Factors of Organic Matter Enrichment in Shale from Wufeng Formation to Submember Long-11 in Southern Sichuan

A total of 70 shale samples from seven core holes, namely, N203, N208, N209, N210, N211, N215 and N217, in Changning area, south Sichuan, were analyzed for major and trace elements. Based on an analysis of longitudinal variation characteristics of major and trace elements, the REDOX conditions, paleoproductivity, relative sea level height and terrigenous detrital injection amount of gas-bearing shale in Wufeng Formation–Submember Long-11 in the Changning area were studied. And, the main controlling factors of organic matter enrichment in Wufeng Formation–Submember Long-11 were discussed. The results show the following: (1) Trace elements Mo, U, Ba and Ni are relatively enriched in the shale of Wufeng Formation–Submember Long-11 in the Changning area, while the Co element is deficient. The flat distribution pattern of rare earth in Wufeng Formation–Submember Long-11 shows that the shale deposits are weakly influenced by terrigenous materials. The amount of terrigenous injection in Wufeng Formation is higher than that in Submember Long-11, and the amount of terrigenous injection increased gradually from the lower part of Bed Long-111 to the lower part of Bed Long-114. (2) The REDOX environment discrimination indexes such as U/Th, Ni/Co, V/Sc and δU show that the water REDOX conditions of Wufeng Formation–Submember Long-11 in the Changning area have changed many times during the shale sedimentary period, and the overall REDOX conditions are dominated by an anaerobic environment. The REDOX indexes at the boundary between Long-111 and Wufeng Formation are relatively small and in the oxidizing environment range. The REDOX index from Bed Long-111 to Bed Long-114 decreases gradually, and the anaerobic environment of Bed Long-111 and Bed Long-112 gradually changes to the oxygen-poor environment of Bed Long-113; and, the REDOX index of Bed Long-114 is the lowest, which is generally oxygen rich. (3) Organic matter enrichment in Wufeng Formation Submember Long11 in the Changning area is mainly controlled by REDOX conditions. Low terrigenous injection and a relatively high sea level have positive effects on organic matter enrichment, but there is no obvious relationship between the paleoproductivity and organic matter enrichment.

Integrating compound-specific stable isotope and enantiomer-specific analysis to characterize the isomeric and enantiomeric signatures of hexachlorocyclohexanes (HCHs) in paddy soils

Organic pollutants in paddy fields may undergo different processes from those in dryland due to the anaerobic environment. The integrated use of compound-specific stable isotope analysis (CSIA) and enantiomer-specific analysis is a promising technique for understanding the behavior and fate of organic pollutants in soils. In this study, soil samples were collected from paddy fields in three major rice cultivation regions of China, spanning a transect of 4000 km. The mean concentrations of ƩHCHs in paddy soils from the Taihu Plain were the highest (1.44 ng/g). The ratios of α-HCH/β-HCH (all below 11.8) and α-HCH/γ-HCH (92% below 4.64), as well as the enantiomeric fractions (EFs) of chiral α-HCH (mean of 0.81), reflected that the distribution of HCHs was affected by the use of both technical HCHs and lindane. The preferential depletion of (-)-α-HCH and pronounced carbon isotope fractionation of α-HCH (δ13C of −28.22 ± 0.92‰ −23.63 ± 1.89‰) demonstrated its effective transformation. Factors such as altitude, soil temperature, soil pH, soil conductivity and soil organic matter significantly influenced the fate and transformation of HCHs. The current study highlights the integrated application of CSIA and enantiomer-specific analysis to provide multiple lines of evidence for the transformation of HCHs in soils.

Identification of the Microbial Transformation Products of Secoisolariciresinol Using an Untargeted Metabolomics Approach and Evaluation of the Osteogenic Activities of the Metabolites.

Secoisolariciresinol (SECO) is one of the major lignans occurring in various grains, seeds, fruits, and vegetables. The gut microbiota plays an important role in the biotransformation of dietary lignans into enterolignans, which might exhibit more potent bioactivities than the precursor lignans. This study aimed to identify, synthesize, and evaluate the microbial metabolites of SECO and to develop efficient lead compounds from the metabolites for the treatment of osteoporosis. SECO was fermented with human gut microbiota in anaerobic or micro-aerobic environments at different time points. Samples derived from microbial transformation were analyzed using an untargeted metabolomics approach for metabolite identification. Nine metabolites were identified and synthesized. Their effects on cell viability, osteoblastic differentiation, and gene expression were examined. The results showed that five of the microbial metabolites exerted potential osteogenic effects similar to those of SECO or better. The results suggested that the enterolignans might account for the osteoporotic effects of SECO in vivo. Thus, the presence of the gut microbiota could offer a good way to form diverse enterolignans with bone-protective effects. The current study improves our understanding of the microbial transformation products of SECO and provides new approaches for new candidate identification in the treatment of osteoporosis.

Expansion of carbon source utilization range of Shewanella oneidensis for efficient azo dye wastewater treatment through co-culture with Lactobacillus plantarum.

Shewanella oneidensis has demonstrated excellent potential for azo dye decolorization and degradation. However, in anaerobic environments, S. oneidensis has a narrow carbon source spectrum, which requires additional electron donors, such as sodium lactate. This increases the practical application costs for wastewater treatment. Here, we aimed to expand the carbon source utilization range of S. oneidensis FJAT-2478 by co-culturing it with Lactobacillus plantarum FJAT-7926, leveraging their commensalism relationship to develop a metabolic chain. Results showed that a 1:2 initial ratio of L. plantarum FJAT-7926 to S. oneidensis FJAT-2478 achieved a 97.16% decolorization rate of methyl orange when glucose served as the sole carbon source. This co-culture system achieved a decolorization rate comparable to that obtained using sodium lactate as an electron donor and was significantly higher than that achieved by L. plantarum FJAT-7926 (7.88%) or S. oneidensis FJAT-2478 (6.89%) alone. After undergoing five cycles, the co-culture system continued to exhibit effective decolorization. It was demonstrated that the co-culture system could use common and inexpensive carbon sources, such as starch, molasses, sucrose, and maltose, to decolorize azo dyes. For instance, 100mg/L methyl orange could be degraded by over 98.05% within 24h. The results indicated that the degradation rates of methyl orange were higher when L. plantarum was inoculated first, followed by a subsequent inoculation of S. oneidensis after 2h. The co-culturing of L. plantarum FJAT-7926 and S. oneidensis FJAT-2478 proved to be an effective strategy in treating azo dye wastewater, expanding the potential practical applications of S. oneidensis.