Abstract
ABSTRACTThe genome of the immunomodulatory Lactobacillus plantarum MPL16, a strain able to ferment wakame (Undaria pinnatifida), is described here. The reads were assembled into contigs with a total size 3,278,495 bp. The genome information will be useful for further specific genetic studies of this strain that evaluate its immunomodulatory and biotechnological properties.
Highlights
The genome of the immunomodulatory Lactobacillus plantarum MPL16, a strain able to ferment wakame (Undaria pinnatifida), is described here
The RAST server and the NCBI’s Prokaryotic Genome Annotation Pipeline were used for the functional annotation of predicted genes [3]. tRNAs and rRNAs were identified by tRNAscan-SE and RNAmmer, respectively [4, 5]
The draft genome of L. plantarum MPL16 consists of 3,278,495 bp with a mean GϩC content of 43.6%
Summary
The genome of the immunomodulatory Lactobacillus plantarum MPL16, a strain able to ferment wakame (Undaria pinnatifida), is described here. We present a draft genome sequence of L. plantarum MPL16, which was sequenced using a whole-genome shotgun strategy on an Illumina MiSeq sequencer. Paired reads with lengths of 300 bp were obtained corresponding to a 3,580-fold coverage. Quality-filtered reads were assembled using Ngen version 12.2.0 software (DNASTAR).
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