Water Deer Research Articles

Molecular Identification of Bacillus Isolated from Korean Water Deer (Hydropotes inermis argyropus) and Striped Field Mouse (Apodemus agrarius) Feces by Using an SNP-Based 16S Ribosomal Marker.

Simple SummaryWildlife is a great concern because of its free-ranging movements. They carry bacterial zoonoses in their feces, such as Bacillus species. In this study, we developed a 16S Bacillus species-specific 16S ribosomal RNA (rRNA) molecular marker for species identification. For discrimination of genetically similar members of Bacillus cereus group, including Bacillus cereus, B. anthrax, and B. thuringiensis, a single nucleotide polymorphism (SNP)-based marker was developed. We altered an artificial base at the 3′-end of SNP sites in each SNP-based 16S rRNA primer sequence to improve the ability of SNP-based primers to bind the PCR template sequence, thereby improving the allele-specific detection of target B. cereus strains. SNP analysis in high-quality DNA sequences could facilitate identification and discrimination of closely related bacterial species.Ambiguous, heterogeneous, endospore-forming Bacillus species, notably Bacillus cereus, often produce fatal toxins that threaten human health. We identified Bacillus from wild animal fecal samples (n = 80), including the Korean water deer (n = 25) and striped field mouse (n = 55). Using traditional culture-based methods, 25 animal fecal samples (31.25%; 25/80) were found to be positive for Bacillus species, whereas using molecular techniques, 19 samples (23.75%; 19/80) were found to be positive for the same. In addition, we designed a Bacillus species-specific 16S ribosomal RNA (rRNA) gene marker and utilized it to identify 19 samples by means of PCR amplification and sequencing, using at least one colony from the 19 Bacillus positive samples. The recovered sequences were matched to sequences of three Bacillus species (B. cereus, B. amyloliquefaciens, and B. megaterium) from the GenBank database. Moreover, the phylogenetic tree generated in this study established specific clades for the Bacillus group. In addition, to differentiate between B. cereus, B. anthracis, and B. thuringiensis, we designed a single nucleotide polymorphism (SNP)-based primer by identifying SNPs in the alignment of 16S rRNA gene sequences of B. cereus group strains. The SNPs were used to design primer sets for discrimination between highly similar species from the B. cereus group. The study could be used in surveillance of agricultural fresh-produce-associated Bacillus outbreaks, for accurate identification of each Bacillus species, and in the development of control measures.

서식지 선호도 및 품질 평가 모형의 신뢰성 개선: 한국 고라니의 경우

Purpose: Predicting the occurrence of wild species at the landscape level is a crucial task for environmental managers and conservation biologists. Modeling and evaluating wildlife habitat quality based on the Geographic Information Systems (GIS) technique provides new opportunities for enhancing model predictability.<BR>Methods: We developed a GIS-based habitat suitability index (HSI) model for Korean water deer (Hydropotes inermis argyropus) in Chungnam province, Korea, where they are a significant cause of damage to vegetables and crops. The model was based primarily on logistic regression analysis and was used to assess the impact of multiple variables, such as landscape patterns and structures, topographic characteristics, and human disturbance, on habitat suitability for the species. After developing the model, we employed it to produce a habitat-suitability map.<BR>Results: The HSI model yielded a p-value of 0.339 (χ² = 9.033) and a 74.0% correct prediction rate for the overall predicted data. The model also demonstrated that 42.4% of the province is covered in poor-quality habitat, while Korean water deer prefer fair-quality habitats (mean HSI = 0.50). In addition, the observation probability increased when HSI values rose, meaning that the model has good predictive power.<BR>Conclusion: Associations between landscape patterns and habitat requirements could be utilized to build accurate, easy-to-apply, predictive models for the habitats of wild species. The HSI model and habitat-suitability map provide solid foundations on which to build effective wildlife management and Agri-Environment policies with local governments to conserve endangered species.

Identification of Babesia capreoli from Korean Water Deer in the Republic of Korea.

Babesiosis is a tick-borne disease caused by intraerythrocytic protozoa belonging to the genus Babesia that is primarily transmitted through Ixodid ticks and is highly pathogenic to ruminants, horses, pigs, dogs, cats, and in some cases, even humans. Babesia is considered an increasing threat to animal and human health. In this study we report Babesia capreoli infection in Korean water deer (Hydropotes inermis argyropus). Blood samples of 77 wild animals (62 Korean water deer and 15 Korean raccoon dogs [Nyctereutes procyonoides koreensis]) were analyzed to detect Babesia infection. First, PCR was performed to investigate Babesia infection using the partial 18S rRNA gene. Among the 77 wild animals examined, 11 Korean water deer were positive for infection as per the results of sequence analysis. Next, these 11 samples were reanalyzed by PCR using newly designed primers to differentiate between B. capreoli and Babesia divergens. Finally, only one Korean water deer sample was found to be positive for B. capreoli. The nucleotide sequence of this protozoan showed 99.6 - 99.7% identity to those of B. capreoli reported previously. Phylogenetic analysis revealed that the sequence belonged to the B. capreoli clade and diverged from the B. divergens clade. Three nucleotides at positions 631, 663, and 1637 were analyzed to differentiate between B. capreoli and B. divergens. The nucleotides at positions 631 and 1637 were identical to those of B. capreoli, whereas that at position 663 was different. The sequence detected in Korean water deer also exhibited differences at other four positions (669, 704, 711, and 1661) compared with other B. capreoli sequences. This study indicates that Korean water deer serve as a reservoir for B. capreoli. In addition, the primers designed in this study can be used to detect B. capreoli. Future studies should explore the tick vectors that transmit B. capreoli and its pathogenicity. This study was approved by the Institutional Committee of Graduate Studies and Research at Jeonbuk National University, ROK (IACUC decision no.: CBU 2014-00026).

Analysis of Water Deer Roadkills Using Point Process Modeling in Chungcheongnamdo, South Korea

The expansion of road networks and increased traffic loads have resulted in an increase in the problem of wildlife roadkill, which has a serious impact on both human safety and the wildlife population. However, roadkill data are collected primarily from the incidental sighting, thus they often lack the true-absence information. This study aims to identify the factors associated with Korean water deer (Hydropotes inermis) roadkill in Korea using the point processing modeling (PPM) approach. Water deer roadkill point data were fitted with explanatory variables derived from forest cover type, topography, and human demography maps and an animal distribution survey. Water deer roadkill showed positive associations with road density, human population density, road width, and water deer detection point density. Slope and elevation showed negative associations with roadkill. The traffic volume and adjacent water deer population may be the major driving factors in roadkill events. The results also imply that the PPM can be a flexible tool for developing roadkill mitigation strategy, providing analytical advantages of roadkill data, such as clarification of model specification and interpretation, while avoiding issues derived from a lack of true-absence information.

Participation of water deer (Hydropotes inermis argyropus) in mercury transport in the ecosystem of Southern Primorye

Abstract. We present the first opportunity to study mercury in the fur of a water deer that recently entered Russia.13 samples from 7 animals (fur was taken from the back and belly) were collected similarly to the World Health Organization recommendations for humans. The mean concentration of total mercury in the fur of water deer was 0.01 0.003 mg/kg, which roughly coincides with the mercury in the fur of other herbivorous animals. For a more accurate assessment, it is necessary to obtain data for other deers in the study region.

A Study on the Behavioral Ecology of Water Deer (Hydropotes inermis) According to Different Habitat Environment

설악산국립공원 장재터 사람 거주지 인근 지역의 농경지에서 서식하는 고라니와 양구생태식물원의 산림 임연부 지역에서 서식하는 고라니의 행동권와 활동패턴을 조사하였다. 설악산국립공원 장재터에 서식하는 고라니의 행동권은 0.176㎢(Kermel 95%)이며 이중 중심지역은 0.039㎢(Kermel 50%)였다. 서식지가 잘 보전된 양구생태식물원 고라니의 행동권은 0.597㎢(Kernel 95%), 중심지역은 0.129㎢(Kernel 50%)였다. 고라니의 일일 행동권의 평균 면적은 장재터에 서식하는 고라니의 경우 0.041±0.031㎢였으며 평균 이동거리는 50m이하로 활동이 활발한 시간은 6시, 12시, 19시, 22시였다. 양구생태식물원에 서식하는 고라니의 일일행동권 평균 면적은 0.134±0.058㎢였고, 평균 이동거리는 100m이상으로 15시에 가장 활발한 활동을 나타냈고 13시부터 17시 사이에 활동이 집중되었다. 인위적 교란이 있는 설악산국립공원 장재터에 서식하는 고라니와 서식지가 잘 보전된 양구생태식물원에 서식하고 있는 고라니의 행동권 및 행동 특성은 차이를 나타냈다.

Spatial Characteristics of Wildlife-Vehicle Collisions of Water Deer in Korea Expressway

In recent decades, rapid industrial growth has accelerated the construction of new roads, which has led to the destruction and isolation of wildlife habitats. Newly constructed roads affect wildlife in many ways. In particular, fatal wildlife-vehicle collisions (WVCs) have a direct impact on wildlife. A substantial number of WVCs occur every year on expressways, where vehicle speeds and vehicle traffic are significant. However, our understanding of the relative importance of the factors associated with areas in which large numbers of WVCs occur on the expressway remains poor. Therefore, herein, we analyze the spatial characteristics of WVCs. The effect of spatial distribution on the occurrence of WVCs was analyzed using the types of land cover in the areas where water deer appear (Cheongju, Boeun, and Sangju) and the areas in which WVCs occur along the Cheongju–Sangju Expressway (CSE). We identified the WVC hotspots by using CSE patrol data recorded between January 2008 and December 2019, and we analyzed the corresponding distribution patterns and land cover characteristics. Along the CSE, a total of 1082 WVCs occurred, out of which collisions involving water deer (Hydropotes inermis argyropus) accounted for 91%. Water deer appear frequently in Forested Areas and Agricultural Land, but the WVC distribution in the Hotspots followed a highly clustered pattern, with a higher proportion of WVCs occurring in Used Areas (areas including buildings such as residential facilities, commercial and industrial facilities, and transportation facilities). Used Areas have a smaller cut slope compared to Forested Areas, and Used Areas are open terrains. Therefore, the occurrence of WVCs will be high given that wildlife can easily access the expressway. Based on these results, we can infer that the landscapes near the expressway influence the occurrence of WVCs. To establish an effective policy for reducing WVCs on a road, the WVC characteristics and spatial distribution of the road should be considered together. Further research on the wildlife ecology and land-use status of WVC hotspots is required to mitigate WVCs on expressways and protect human and animal life. Therefore, if the characteristics of WVC hotspots are analyzed considering the characteristics of various ecosystems, an appropriate WVC reduction plan can be established.

Seed recovery and germination rate after gut passage by Korean water deer (Hydropotes inermis argyropus)

AbstractLarge herbivores can disperse seeds over long distances through endozoochory. The Korean water deer (Hydropotes inermis argyropus), an internationally vulnerable species but locally considered a vermin, is a potential endozoochorous seed dispersal vector. In this study, feeding experiments were conducted to test the efficiency of seed dispersal through gut ingestion by the Korean water deer, its temporal pattern and the effect of gut passage on seed recovery and germination rate. Eight plant species, including species that formerly germinated from its faeces, were used to feed three Korean water deer. Once the deer had consumed all the provided seeds, their faeces were collected after 24, 48, 72 and 96 h. The collected faeces were air-dried, and the number of seeds retrieved from the faeces was counted every 24 h (0–24, 24–48, 48–72 and 72–96 h). Among the eight plant species, six species were retrieved with intact seeds.Panicum bisulcatumhad the highest recovery rate of 33.7%, followed byAmaranthus mangostanus(24.5%) andChenopodium album(14.4%). Most of the seeds were recovered within the 24–48 h time interval. Germination tests were conducted on the ingested and uningested seeds for the four species which had a sufficient recovery rate. The effects of gut passage on seed germination differed according to plant species. The germination rate substantially decreased after gut passage. The results suggest that the Korean water deer can disperse seeds, potentially over long distances albeit at a high cost of low seed recovery and germination rate.

Molecular mechanisms and topological consequences of drastic chromosomal rearrangements of muntjac deer

Muntjac deer have experienced drastic karyotype changes during their speciation, making it an ideal model for studying mechanisms and functional consequences of mammalian chromosome evolution. Here we generated chromosome-level genomes for Hydropotes inermis (2n = 70), Muntiacus reevesi (2n = 46), female and male M. crinifrons (2n = 8/9) and a contig-level genome for M. gongshanensis (2n = 8/9). These high-quality genomes combined with Hi-C data allowed us to reveal the evolution of 3D chromatin architectures during mammalian chromosome evolution. We find that the chromosome fusion events of muntjac species did not alter the A/B compartment structure and topologically associated domains near the fusion sites, but new chromatin interactions were gradually established across the fusion sites. The recently borne neo-Y chromosome of M. crinifrons, which underwent male-specific inversions, has dramatically restructured chromatin compartments, recapitulating the early evolution of canonical mammalian Y chromosomes. We also reveal that a complex structure containing unique centromeric satellite, truncated telomeric and palindrome repeats might have mediated muntjacs’ recurrent chromosome fusions. These results provide insights into the recurrent chromosome tandem fusion in muntjacs, early evolution of mammalian sex chromosomes, and reveal how chromosome rearrangements can reshape the 3D chromatin regulatory conformations during species evolution.

Biodiversity and Transportation Infrastructure in the Republic of Korea: A Review on Impacts and Mitigation in Developing the Country

The construction and continued use of transportation infrastructure, specifically roads, has had a significant global impact on biodiversity and the environment. The Republic of Korea, or South Korea, has a road density of 1.13 km/km2. So far, three nationwide studies about vertebrate road-killed species have been reported, showing bias towards medium to large mammals, the most common victims being the Korean water deer (Hydropotes inermis), Korean hare (Lepus coreanus), Siberian roe deer (Capreolus pygargus), and the common raccoon dog (Nyctereutes procyonoides). Road-kills, or wildlife-vehicle collisions (WVCs), tend to occur in or near preferred habitat types or in highly fragmented areas, with roads additionally being linked to habitat fragmentation and loss. Alongside WVCs and habitat effects, information about other adverse effects on biodiversity is scant, although there are reports that heavy metals and other pollutants from road runoff impact marine biodiversity, vegetation, soil, and groundwater. Furthermore, roads have been linked to a prevalence of invasive plant species. To mitigate road impacts, the South Korean government has constructed, with mixed results, 530 wildlife crossing structures, mainly including overpasses and tunnels. To mitigate road impacts more effectively, the country will need more construction, monitoring, and consistent management of wildlife crossing structures. Further, incorporating plans for wildlife crossing structures in early stages of road development will be required.

Surveillance and Molecular Identification ofBorreliaSpecies in Ticks Collected at U.S. Army Garrison Humphreys, Republic of Korea, 2018–2019

Tick-borne pathogens are contributing factors for the increased incidence of vector-borne diseases throughout the world, including Lyme borreliosis, one of the most prevalent spirochetes belonging to the Borrelia burgdorferi sensu lato group. The present study focused on the detection of Borrelia species from hard ticks collected at U.S. Army Garrison Humphreys, Republic of Korea (ROK), using molecular and genotypic analyses. Tick-borne disease surveillance was conducted from January to December, 2018-2019. A total of 24,281 ticks (2 genera and 5 species) were collected from road-killed Korean Water deer (KWD) and by tick drag. Haemaphysalis longicornis (92.0%) was the most commonly collected species, followed by Haemaphysalis flava (4.9%), Ixodes nipponensis (3.1%), Haemaphysalis phasiana (0.07%), and Haemaphysalis japonica (<0.01%). The ospA gene sequences of Borrelia afzelii were detected in 12/529 pools of I. nipponensis. Three and one pools were positive for B. afzelii and Borrelia miyamotoi, respectively, using the 16s rRNA gene. None of the pools of Haemaphysalis ticks collected from KWD or by tick drag were positive for Borrelia species. I. nipponensis was collected throughout the year from KWD and from February to November by tick drag, suggesting that they were active throughout the year, and expanding the risk period for acquiring Lyme borreliosis and Borrelia relapsing fever in the ROK. This study assessed disease risk factors associated with the prevalence of Lyme disease in ticks collected from KWD and by tick drag using molecular analysis. These results provide an understanding and awareness into the prevalence and molecular characteristics of Borrelia species in the ROK.

Analysis of Roadkill on the Korean Expressways from 2004 to 2019.

Expressways in Korea are high-speed traffic roads connecting important cities. Road infrastructure continues to expand to accommodate the increase in traffic volume associated with the growth of industry and tourism. Here, data on 36,863 roadkill events that occurred on expressway routes managed by the Korea Expressway Corporation between 2004 and 2019 were analyzed. Characterizing patterns of roadkill is important for prioritizing roadkill mitigation measures. We identified consistently increasing or decreasing trends using Mann–Kendall statistics and Sen’s slope. Roadkill was most common in Gangwon Province and was concentrated between May and June and between October and December. Water deer (Hydropotes inermis) was the most common road-killed species. The trend analysis revealed a statistically significant decline in Gangwon Province and a statistically significant increase in the Capital Area and Chungnam Province. There was a significant increase in wild boar (Sus scrofa) roadkill in the first and fourth quarters. Mitigation measures are needed for regions and species showing increasing trends, including water deer in the first to third quarters, periods for which no decline in water deer roadkill was noted.

Diet composition of Korean water deer (Hydropotes inermis argyropus) from the Han River Estuary Wetland in Korea using fecal DNA

Abstract To investigate the foraging preferences of the Korean water deer (Hydropotes inermis argyropus) from the Janghang wetlands located in Han River estuary in South Korea, we elucidated their diet compositions using DNA extracted from their fecal samples. Samples were collected from the Janghang wetlands from June 2013 to January 2015. For dietary analysis, we amplified the internal transcribed spacer 2 (ITS2) and the large subunit of ribulose-1,5-bisphosphate carboxylase (rbcL) regions, followed by cloning and sequencing. We were able to detect 20 families and 35 genera of plants from 77 fecal samples, showing that water deer in the Janghang wetlands mainly preferred Salicaceae (27.5%), Fabaceae (17.5%), and Poaceae (14.2%). In winter, the relative frequency of woody plant detection (81.3%) was much higher than that in other seasons. Our results suggest that Korean water deer in Janghang wetlands browse or graze depending on the locally-available plants species in their habitat as intermediate feeders. Non-invasive approaches using fecal samples could be applied to study food webs of various species and ecosystems for conservation and management of wildlife.

An Empirical Analysis on Factors Affecting Water Deer Roadkills in Korea

This paper empirically analyzes the characteristics and conditions of roads that affect roadkills of water deer in Korea, and suggests strategies for the reduction of such roadkills. A total of 133 water deer roadkills that occurred during one year from May 1, 2018 to April 30, 2019 are included in the analysis. The Kaplan-Meier estimator and survival regression are applied as analytic tools. According to the empirical results, it seems that the probability of water deer-vehicle collisions is significantly lower on sites with more lighting facilities, less traffic, fewer lanes, a flat road or uphill slope, longer distance from a water source, more urbanized areas, or a speed reduction sign. The results are largely similar when the error term assumes a Weibull distribution rather than an exponential distribution, suggesting that the analysis results are robust.

Confirmed archaeological evidence of water deer in Vietnam: relics of the Pleistocene or a shifting baseline?

Studies of archaeological and palaeontological bone assemblages increasingly show that the historical distributions of many mammal species are unrepresentative of their longer-term geographical ranges in the Quaternary. Consequently, the geographical and ecological scope of potential conservation efforts may be inappropriately narrow. Here, we consider a case-in-point, the water deer Hydropotes inermis, which has historical native distributions in eastern China and the Korean peninsula. We present morphological and metric criteria for the taxonomic diagnosis of mandibles and maxillary canine fragments from Hang Thung Binh 1 cave in Tràng An World Heritage Site, which confirm the prehistoric presence of water deer in Vietnam. Dated to between 13 000 and 16 000 years before the present, the specimens are further evidence of a wider Quaternary distribution for these Vulnerable cervids, are valuable additions to a sparse Pleistocene fossil record and confirm water deer as a component of the Upper Pleistocene fauna of northern Vietnam. Palaeoenvironmental proxies suggest that the Tràng An water deer occupied cooler, but not necessarily drier, conditions than today. We consider if the specimens represent extirpated Pleistocene populations or indicate a previously unrecognized, longer-standing southerly distribution with possible implications for the conservation of the species in the future.

Genetic Characterization of Feline Parvovirus Isolate Fe-P2 in Korean Cat and Serological Evidence on Its Infection in Wild Leopard Cat and Asian Badger.

Feline parvovirus (FPV) is a small, non-enveloped, single-stranded DNA virus that infects cats. We recently isolated a feline parvovirus Fe–P2 strain from a dead stray cat in Iksan, 2017. Its partial genomic sequence (4,643 bases) was obtained, and phylogenetic analysis based on the VP2 nucleotide sequence showed that the FPV Fe-P2 strain was closely related to the FPV isolate Gigucheon in cat, 2017 (MN400978). In addition, we performed a serum neutralization (SN) test with the FPV isolates in various mammalian sera. These were from raccoon dog, water deer, Eurasian otter, Korean hare, leopard cat, and Asian badger, which were kindly provided by Chungnam Wild Animal Rescue Center. Notably, serological evidence of its infection was found in Asian badger, Meles leucurus (2/2) and leopard cat, Prionailurus bengalensis (5/8) through SN tests, whereas there was no evidence in raccoon dog, water deer, Eurasian otter, and Korean hare based on the collected sera in this study. These findings might provide partial evidence for the possible circulation of FPV or its related viruses among wild leopard cat and Asian badger in Korea. There should be additional study to confirm this through direct detection of FPVs in the related animal samples.

Decision-Making Model for Safety Countermeasures Based on Characteristics of Water Deer Roadkills

Decision-Making Model for Safety Countermeasures Based on Characteristics of Water Deer Roadkills

Bovine Coronavirus and the Associated Diseases.

Coronaviruses (CoVs) possess the largest and most complex RNA genome (up to 32 kb) that encodes for 16 non-structural proteins regulating RNA synthesis and modification. Coronaviruses are known to infect a wide range of mammalian and avian species causing remarkably diverse disease syndromes. Variable tissue tropism and the ability to easily cross interspecies barriers are the well-known characteristics of certain CoVs. The 21st century epidemics of severe acute respiratory CoV (SARS-CoV), Middle East respiratory CoV and the ongoing SARS-CoV-2 pandemic further highlight these characteristics and emphasize the relevance of CoVs to the global public health. Bovine CoVs (BCoVs) are betacoronaviruses associated with neonatal calf diarrhea, and with winter dysentery and shipping fever in older cattle. Of interest, no distinct genetic or antigenic markers have been identified in BCoVs associated with these distinct clinical syndromes. In contrast, like other CoVs, BCoVs exist as quasispecies. Besides cattle, BCoVs and bovine-like CoVs were identified in various domestic and wild ruminant species (water buffalo, sheep, goat, dromedary camel, llama, alpaca, deer, wild cattle, antelopes, giraffes, and wild goats), dogs and humans. Surprisingly, bovine-like CoVs also cannot be reliably distinguished from BCoVs using comparative genomics. Additionally, there are historical examples of zoonotic transmission of BCoVs. This article will discuss BCoV pathogenesis, epidemiology, interspecies transmission, immune responses, vaccines, and diagnostics.

Assessment of the Behavioural Response of Korean Water Deer (Hydropotes inermis argyropus) to Different Fence Heights.

Simple SummaryThe present study aimed to investigate the success rate of fences and classify the behavioural responses of Korean water deer (Hydropotes inermis argyropus) to different fence heights. The dominant behaviours before the deer crossed the fences by performing vertical and running jumps were recession and rest when the fence heights were lower or higher than 1.2 m, respectively. The general threshold (fence height) for discriminating success or failure was 0.9 m; however, we recommend a fence height of 1.5 m, considering the cost and roadkill risk. Placing exit pathways for deer and eliminating possible resting areas outside fences are essential for reducing the number of successful jump attempts.Fences have been widely implemented to reduce the risk of wildlife–vehicle collisions, wildlife disease spread, and crop damage. To manufacture fences, it is imperative to assess the behavioural responses of the target species. Here, we investigated the success rate of fences and classified eight behavioural responses of Korean water deer (Hydropotes inermis argyropus) to different fence heights. We explored the association of 801 behavioural responses and defined a threshold based on 40 events by applying non-metric multidimensional scaling and a binary logistic generalised linear mixed model. With fences lower and higher than 1.2 m, recession and rest were the dominant behaviours, respectively, before the deer crossed the fences by performing vertical and running jumps. Considering all independent events, 0.9 m was the marginal threshold, with highly variable outliers over this value. Placing exit pathways for deer and eliminating possible resting areas outside fences are essential for reducing the number of successful jump attempts. The optimal fence height could differ based on conditional factors; however, we recommend a height of 1.5 m considering the cost and roadkill risk. In conclusion, exploring and classifying the behavioural responses of the target species may be critical for establishing appropriate fence protocols.

Molecular detection of Rickettsia raoultii, Rickettsia tamurae, and associated pathogens from ticks parasitizing water deer (Hydropotes inermis argyropus) in South Korea

Most defined Rickettsiales, which can be transmitted by ticks, are known to be important zoonotic pathogens. Some of these pathogens can cause severe diseases in humans, including anaplasmosis, rickettsioses, and ehrlichiosis. Previous studies in South Korea have investigated tick-borne pathogens (TBPs) residing in ticks found on grassy vegetation and animals. However, there is limited phylogenetic information on TBPs in ticks parasitizing Korean water deer (KWD; Hydropotes inermis argyropus). This study evaluated the prevalence, risk factors (regions, tick stages, and tick species), and coinfections of TBPs in ticks parasitizing KWD. Were collected a total of 283 hard ticks, including Haemaphysalis longicornis, Haemaphysalis flava, and Ixodes nipponensis from KWD in South Korea from 2013 to 2017. In 173 tested tick pools, genes for seven TBPs, namely Rickettsia raoultii (20 %), Rickettsia tamurae (1 %), Candidatus Rickettsia longicornii (31 %), Ehrlichia canis (3 %), Anaplasma capra (3 %), Anaplasma bovis (2 %), and Anaplasma sp. (1 %), were detected. The unidentified Anaplasma sp. isolates revealed a 98.4 %–99.3 % sequence identity with Anaplasma sp. in GenBank sequences obtained from ticks. To the best of our knowledge, this is the first study to report the presence of the emerging human pathogen R. tamurae in South Korea. These results should increase awareness about the need for continued development of epidemiological control measures, and medical and veterinary communities must be informed of their high infection potential and clinical complexity in humans.