Variation In Taxonomic Composition Research Articles

Biodiversity dimensions of fish communities inhabiting coastal muddy bottoms in the Tropical South Atlantic

This study provides insights into the intricate dynamics of coastal muddy bottoms within tropical regions spanning from the Amazon to the São Francisco River estuary. Through species analysis, distinct species pools distributed across the Tropical South Atlantic have been identified, revealing diverse patterns in fish biodiversity that transcend mere species richness and abundance, extending to their functional composition. More precisely, significant variations in taxonomic composition among the studied areas were observed, with differences in species composition and the presence of exclusive species contributing to the rise of unique patterns in functional diversity, partly attributed to differences in biogeographical provinces. Moreover, local processes such as salinization and estuarization also play crucial roles in shaping the taxonomic and functional diversity patterns within coastal muddy bottoms. By acknowledging the distinctive characteristics and ecological significance of these habitats, we can ensure the preservation of fish communities and uphold their crucial roles as vital nursery and fishing grounds.

Resolving taphonomic and preparation biases in silicified faunas through paired acid residues and X-ray microscopy.

Paired petrography and acid maceration has shown that preferential silicification of shelly faunas can bias recovery based on taxon and body size. Here, silicified fossils from the Upper Ordovician Edinburg Formation, Strasburg Junction, Virginia, USA, were analyzed using X-ray tomographic microscopy (μCT) in conjunction with recovered residues from acid maceration of the same materials to further examine sources of potential bias. Results reveal that very small (<~1 mm) fossils are poorly resolved in μCT when scanning at lower resolutions (~30 µm), underestimating abundance of taxa including ostracods and bryozoans. Acid maceration, meanwhile, fails to recover poorly silicified fossils prone to disarticulation and/or fragmentation during digestion. Tests for patterns of breakage, however, indicate no significant size or taxonomic bias during extraction. Comparisons of individual fossils from 3-D fossil renders and maceration residues reveal patterns of fragmentation that are taxon-specific and allow the differentiation of biostratinomic and preparational breakage. Multivariate ordinations and cluster analyses of μCT and residue data in general produce concordant results but indicate that the variation in taxonomic composition of our samples is compromised by the resolvability of small size classes in μCT imaging, limiting the utility of this method for addressing paleoecological questions in these specific samples. We suggest that comparability of results will depend strongly on the sample size, taphonomic history, textural, and compositional characteristics of the samples in question, as well as μCT scan parameters. Additionally, applying these methods to different deposits will test the general applicability of the conclusions drawn on the relative strengths and weaknesses of the methods.

Functional redundancy across space and time in litter‐degrading fungal communities

AbstractIntroductionMicrobial‐driven litter decomposition contributes significantly to global carbon (C) turnover. Fungi play central roles in the degradation process due to their ability to hydrolyse recalcitrant litter components. The spatiotemporal variations in taxonomic composition of litter‐degrading fungi have been well documented. However, associated variations in litter‐degradation‐related functional composition of fungal communities remain unexplored.Materials and MethodsIn this study, a 16‐week field‐based buried rice straw experiment was conducted at three experimental sites across subtropical China in combination with laboratory 13C‐straw‐based DNA stable‐isotope probing (DNA‐SIP) microcosm experiments. Amplicon sequencing combined with shotgun metagenomic sequencing were the approaches of choice.ResultsThe field experiment showed that the taxonomic composition of the straw‐degrading fungal community was highly variable while the functional composition was rather stable. The higher permutational multivariate analysis of variation F scores (20.904−48.660) and the steeper slopes (1.92 E‐04−4.15E‐04) of the distance decay relationship for taxonomic composition than for function across periods (with lower F scores = 7.047−21.601 and gradual slopes = −1.33 E‐05 to −1.03E‐04) both indicated that the spatiotemporal patterns of functional composition in litter‐degrading fungi community were more conserved. The laboratory DNA‐SIP confirmed the field observations and showed that the conserved functional composition in litter‐degrading fungi was underpinned by a high functional redundancy of Basidiomycota.ConclusionFunction and taxonomy of litter‐degrading fungi were decoupled. The functional composition of the litter‐degrading fungal community was highly conserved in space and time, the taxonomic composition less so. The main drivers behind the observed taxonomic decoupling are probably/most likely functional redundancy and metabolic niche selection resulting in conservation of function, with changing environmental conditions and dispersal limitation drove the observed high taxonomic turnover of the community over the course of the litter degradation progression. Our study provides valuable insights in the ecology of fungi and their roles in in global C sequestration for ecosystem sustainable development.

Spatial variation in the recovery potential of freshwater macroinvertebrate assemblages: Moving towards spatially defined assemblage vulnerability to chemicals

The vulnerability of freshwater biodiversity to chemical stressors is dependent on its ability to resist chemical stress and recover from any stress-induced effects. Spatial variation in recovery has the potential to exacerbate or mitigate assemblage vulnerability but this has not been explored in detail. By combining information on assemblage-specific recovery potential with information on assemblage-specific chemical sensitivity, we have demonstrated that the vulnerability of 3307 macroinvertebrate assemblages to 18 different chemicals is spatially dependent and that recovery potential may reduce chemical risk. The recovery potential of each assemblage was quantified based on trait information and landscape factors using a weighted sum method, but it did not consider succession processes. Recovery potential varied by river type with assemblages in mid-altitude siliceous rivers with small catchments in the west of England having the lowest recovery potential. For 17 or the 18 chemicals investigated, there was a positive correlation between the recovery potential and sensitivity and this was strongest for assemblages exposed to metals. More sensitive assemblages had a higher recovery potential and were therefore potentially less vulnerable than would be expected based on sensitivity alone. Assemblages in rivers with small catchments were the most vulnerable to chemical exposure. Furthermore, assemblages with high vulnerability to insecticide exposure were more prevalent in mid-altitude rivers with siliceous geology in the west of England, whereas assemblages with high vulnerability to metals were more prevalent in lowland rivers with calcareous or mixed geology in the midlands. This study: (i) highlights the importance of spatial context in determining the risk of chemical pollution to freshwater biodiversity; (ii) demonstrates how spatial variation in taxonomic composition influences both the internal and external recovery of assemblages and how landscape factors modify trait-based recovery capabilities; (iii) provides the foundations for spatially-defined vulnerability assessment by identifying ecological scenarios for assessing chemical risk.

Sexual transmission may drive pair similarity of the cloacal microbiome in a polyandrous species.

All animals host a microbial community within and on their reproductive organs, known as the reproductive microbiome. In free-living birds, studies on the sexual transmission of bacteria have typically focused on a few pathogens instead of the bacterial community as a whole, despite a potential link to reproductive function. Theory predicts higher sexual transmission of the reproductive microbiome in females via the males' ejaculates and higher rates of transmission in promiscuous systems. We studied the cloacal microbiome of breeding individuals of a socially polyandrous, sex-role-reversed shorebird, the red phalarope (Phalaropus fulicarius). We expected (i) higher microbial diversity in females compared to males; (ii) low compositional differentiation between sexes; (iii) lower variation in composition between individuals (i.e. microbiome dispersion) in females than in males; (iv) convergence in composition as the breeding season progresses as a consequence of sexual transmission and/or shared habitat use; and (v) higher similarity in microbial composition between social pair members than between two random opposite-sex individuals. We found no or small between-sex differences in cloacal microbiome diversity/richness and composition. Dispersion of predicted functional pathways was lower in females than in males. As predicted, microbiome dispersion decreased with sampling date relative to clutch initiation of the social pair. Microbiome composition was significantly more similar among social pair members than among two random opposite-sex individuals. Pair membership explained 21.5% of the variation in taxonomic composition and 10.1% of functional profiles, whereas temporal and sex effects explained only 0.6%-1.6%. Consistent with evidence of functional convergence of reproductive microbiomes within pairs, some select taxa and predicted functional pathways were less variable between social pair members than between random opposite-sex individuals. As predicted if sexual transmission of the reproductive microbiome is high, sex differences in microbiome composition were weak in a socially polyandrous system with frequent copulations. Moreover, high within-pair similarity in microbiome composition, particularly for a few taxa spanning the spectrum of the beneficial-pathogenic axis, demonstrates the link between mating behaviour and the reproductive microbiome. Our study is consistent with the hypothesis that sexual transmission plays an important role in driving reproductive microbiome ecology and evolution.

Global patterns and climatic determinants of phylogenetic structure of regional fern floras.

Knowledge of relationships between phylogenetic structure of a biological assemblage and ecological factors that drive the variation of phylogenetic structure among regions is crucial for understanding the causes of variation in taxonomic composition and richness among regions, but this knowledge is lacking for the global flora of ferns. Here, we fill this critical knowledge gap. We divided the globe into 392 geographic units on land, collated species lists of ferns for each geographic unit, and used different phylogenetic metrics (tip- vs basal-weighted) reflecting different evolutionary depths to quantify phylogenetic structure. We then related taxonomic and phylogenetic structure metrics to six climatic variables for ferns as a whole and for two groups of ferns (old clades vs polypods) reflecting different evolutionary histories across the globe and within each continental region. We found that when old clades and polypods were considered separately, temperature-related variables explained more variation in these metrics than did precipitation-related variables in both groups. When analyses were conducted for continental regions separately, this pattern holds in most cases. Climate extremes have a stronger relationship with phylogenetic structure of ferns than does climate seasonality. Climatic variables explained more variation in phylogenetic structure at deeper evolutionary depths.

Alpine constructed wetlands: A metagenomic analysis reveals microbial complementary structure

Constructed wetlands (CWs) are used to water treatment worldwide, however their application at high-altitude is poorly studied. In order to survive mountain winters, CWs rely on native flora and associated microbial communities. However, the choice of plant-microbes pairs more suitable for water treatment is challenging in alpine environments. Using a metagenomic approach, we investigated the composition of prokaryotes and fungal communities, through extensive sampling inside a constructed wetland in the SW-Alps. Best performing plant species were searched among those hosting the most diverse and resilient microbial communities and to this goal, we analysed them in the natural environment also. Our results showed that microbial communities were less diverse in the CW than at natural conditions, and they differed from plant to plant, revealing a clear variation in taxonomic composition between forbs and gramineous plants. Carex rostrata, Deschampsia caespitosa and Rumex alpinus hosted bacteria very active in N-cycles. Moreover, fungal and prokaryotic communities associated to R. alpinus (Polygonaceae) turned to be the richest and stable among the studied species. In our opinion, this species should be prioritized in CWs at high elevations, also in consideration of its low maintenance requirements.

Beta diversity of aquatic macroinvertebrate assemblages associated with leaf patches in neotropical montane streams.

Over 70% of the total channel length in all river basins is formed by low order streams, many of which originate on mountaintops. Headwater streams play fundamental roles in processing and transporting terrestrial and aquatic organic matter, often harboring high biodiversity in bottom leaf patches deposited from riparian vegetation. The objective of this study was to assess the variation in taxonomic composition (measured by beta diversity of aquatic macroinvertebrates) among stream sites located in the Espinhaço Meridional Mountain Range, part of a UNESCO Biosphere Reserve in eastern Brazil. We tested two hypotheses. (a) Taxa turnover is the main reason for differences in aquatic insect assemblages within stream sites; we predicted that turnover would be higher than nestedness in all stream sites. (b) Stream site altitude and catchment elevation range are the main explanatory variables for the differences in beta diversity; we predicted that local stream site variables would account for only minor amounts of variation. In both dry and wet seasons, we sampled twice in two habitat types (five leaf patches in pools and five in riffles) in each of nine stream sites distributed in three different river basins. We computed average pairwise beta diversity among sampling stations and seasons in each stream site by using Jaccard and Bray–Curtis indices, and calculated the percentages of diversity resulting from turnover and nestedness. Finally, we tested the degree that local‐ or catchment‐level predictor variables explained beta diversity. We found that turnover was the main component of beta diversity and that both dissolved oxygen and elevation range best explained Bray–Curtis beta diversity. These results reinforce the importance of leaf patches in montane (sky islands) Neotropical savanna streams as biodiversity hotbeds for macroinvertebrates, and that both local and landscape variables explained beta diversity.

Small carbonaceous fossils (SCFs) from North Greenland: new light on metazoan diversity in early Cambrian shelf environments

AbstractThe Sirius Passet Lagerstätte of North Greenland is one of the oldest records of soft‐bodied metazoan‐dominated ecosystems from the early Cambrian. The Lagerstätte site itself is restricted to just a single c. 1‐km‐long outcrop located offshore from the shelf margin, in an area affected by metamorphic alteration during the Ellesmerian Orogeny (Devonian – Early Carboniferous). The recent recovery of small carbonaceous fossils (SCFs) to the south, in areas that escaped the effects of this deformation, has substantially expanded the known coverage of organic preservation into shallower water depositional settings in this region. Here, we describe additional SCF assemblages from the siliciclastic shelf succession of the Buen Formation (Cambrian Series 2, stages 3–4; c. 515 Ma), expanding the previously documented SCF biota. Newly recovered material indicates a rich diversity of non‐mineralizing metazoans, chiefly represented by arthropod remains. These include the filtering and grinding elements of a sophisticated crustacean feeding apparatus (the oldest crustacean remains reported to date), alongside an assortment of bradoriid sclerites, including almost complete, 3D valves, which tie together a number of SCFs previously found in isolation. Other metazoan remains include various trilobite cuticles, diverse scalidophoran sclerites, and a range of metazoan fragments of uncertain affinity. This shallower water assemblage differs substantially from the Sirius Passet biota, which is dominated by problematic euarthropod stem‐group members and sponges. Although some of these discrepancies are attributable to taphonomic or temporal factors, these lateral variations in taxonomic composition also point to significant palaeoenvironmental and/or palaeoecological controls on early Cambrian metazoan communities.

Forest conversion alters the structure and functional processes of tropical forest soil microbial communities

AbstractMany studies have been carried‐out on the effects of forest conversion on soil microbial community composition and diversity. However, impacts on soil microbial functions and how diversity changes across scales are poorly understood. To fill the research gap, we used metagenomic sequencing and 16S rRNA and ITS gene sequences to evaluate the microbial composition, diversity, and function of 260 soil samples collected from tropical rainforest and rubber plantation sites across Hainan Island, South China. The results revealed that: (a) Forest conversion resulted in shifts in microbial composition (from the Proteobacteria to Chloroflexi), archaeal composition (from Thaumarchaeota to Bathyarchaeota), and fungal composition (from Basidiomycota to Ascomycota). (b) Bacterial alpha, beta, and gamma diversity were not reduced by forest conversion. However, fungal beta diversity was lower in the plantations, resulting in a decrease in gamma diversity. Archaeal beta diversity was higher in rainforest versus rubber plantation soils, but archaeal gamma diversity showed the opposite pattern. (c) Soil functional composition and diversity did not differ with forest type; however, genes related to metabolism and degradation processes were significantly more abundant in the tropical rainforest. These changes in gene abundance could alter ecosystem processes. (d) Soil pH and environmental heterogeneity were the main drivers of microbial taxonomic composition and functional gene composition. Land use explained 13.28% of the variation in taxonomic composition but did not explain changes in functional gene composition. We concluded that land use changes can alter soil microbial community structure and have profound effects on ecosystem functions and processes.

Functional properties of bacterial communities in water and sediment of the eutrophic river-lake system of Poyang Lake, China.

In river-lake systems, sediment and water column are two distinct habitats harboring different bacterial communities which play a crucial role in biogeochemical processes. In this study, we employed Phylogenetic Investigation of Communities by Reconstruction of Unobserved States to assess the potential functions and functional redundancy of the bacterial communities in sediment and water in a eutrophic river-lake ecosystem, Poyang Lake in China. Bacterial communities in sediment and water had distinct potential functions of carbon, nitrogen, and sulfur metabolisms as well as phosphorus cycle, while the differences between rivers and the lake were inconspicuous. Bacterial communities in sediment had a higher relative abundance of genes associated with carbohydrate metabolism, carbon fixation pathways in prokaryotes, methane metabolism, anammox, nitrogen fixation, and dissimilatory sulfate reduction than that of water column. Bacterial communities in water column were higher in lipid metabolism, assimilatory nitrate reduction, dissimilatory nitrate reduction, phosphonate degradation, and assimilatory sulfate reduction than that of sediment bacterial communities. Furthermore, the variations in functional composition were closely associated to the variations in taxonomic composition in both habitats. In general, the bacterial communities in water column had a lower functional redundancy than in sediment. Moreover, comparing to the overall functions, bacterial communities had a lower functional redundancy of nitrogen metabolism and phosphorus cycle in water column and lower functional redundancy of nitrogen metabolism in sediment. Distance-based redundancy analysis and mantel test revealed close correlations between nutrient factors and functional compositions. The results suggested that bacterial communities in this eutrophic river-lake system of Poyang Lake were vulnerable to nutrient perturbations, especially the bacterial communities in water column. The results enriched our understanding of the bacterial communities and major biogeochemical processes in the eutrophic river-lake ecosystems.

Four men in a boat: Ultra-endurance exercise alters the gut microbiome

ObjectivesCompositional and functional adaptions occur in the gut microbiome in response to habitual physical activity. The response of the gut microbiome to sustained, intense exercise in previously active individuals, however, is unknown. This study aimed to prospectively explore the gut microbiome response of four well-trained male athletes to prolonged, high intensity trans-oceanic rowing, describing changes in microbial diversity, abundance and metabolic capacity. DesignA prospective, repeated-measures, within-subject report. MethodsSerial stool samples were obtained from four male athletes for metagenomic whole-genome shotgun sequencing to record microbial community structure and relevant functional gene profiles before, during and after a continuous, unsupported 33-day, 5000 km transoceanic rowing race. Calorific intake and macronutrient composition were recorded by validated food frequency questionnaire and anthropometry was determined by body composition analysis and cardiorespiratory testing. ResultsMicrobial diversity increased throughout the ultra-endurance event. Variations in taxonomic composition included increased abundance of butyrate producing species and species associated with improved metabolic health, including improved insulin sensitivity. The functional potential of bacterial species involved in specific amino and fatty acid biosynthesis also increased. Many of the adaptions in microbial community structure and metaproteomics persisted at three months follow up. ConclusionsThese findings demonstrate that prolonged, intense exercise positively influences gut microbial diversity, increases the relative abundance of some bacterial species and up-regulates the metabolic potential of specific pathways expressing microbial gene products. These adaptions may play a compensatory role in controlling the physiological stress associated with sustained exertion as well as negating the deleterious consequences accompanying endurance exercise.

Seasonal variation in the composition of ground-dwelling anuran (Amphibia) assemblages in southern Brazil

Climate seasonality may differently influence habitat quality and heterogeneity depending on habitat type. We examined whether the taxonomic, functional and phylogenetic composition of ground-dwelling anuran assemblages from grassland and forest habitats vary seasonally. We tested the hypothesis that the forest anuran assemblage varies less seasonally than the grassland assemblage. We monitored anurans using pitfall trap arrays in two areas, sampled across four seasons over a two-year period. For the functional composition, we acquired information on species morphology, reproduction, and habitat use to represent the anuran niche. For the phylogenetic composition, we used the most comprehensive anuran phylogeny. We used Principal Coordinate Analysis and Analysis of Variance to evaluate seasonal variations in assemblage composition along the study period. Our data revealed significant seasonal variation in the taxonomic and phylogenetic composition of anuran assemblages. Variation in taxonomic composition was higher in the grassland than in the forest assemblage, while variation in phylogenetic composition was higher in the spring-summer than in the autumn-winter seasons. We did not identify seasonal variation in functional composition. Seasonal variations in taxonomic and phylogenetic composition, but not in functional composition, indicate that the species with a fluctuating seasonal abundance have similar life-history traits, but belong to different lineages. Keywords: anuran traits, Brazilian highland grasslands, habitat variability, temporal beta diversity, temporal turnover.

Long-term monitoring of benthic foraminiferal assemblages from Asia's largest tropical coastal lagoon, Chilika, India

The present study undertaken in the largest coastal lagoon of Asia, Chilika, deals with monthly monitoring of benthic foraminifera assemblages in terms of distribution pattern, diversity and variations in taxonomic composition spanning over a period of 20 months. In total, 13 species of benthic foraminifera represented by eight families were identified in the lagoon. The stations in the Southern sector of the lagoon showed relatively low foraminifera abundance yet high diversity whereas higher abundance and lower diversity were observed in stations located in the Central sector which indicates the spatial patterning of the assemblage. Live foraminifera abundance was sparse in the study area indicating the stressed nature of the lagoon environment. The dissolved nutrient concentration of bottom water reflected significant seasonal variation. The stressed nature of the lagoon is further indicated by the dominance of the genus Ammonia across the inner sectors of the lagoon, a genus known to inhabit impacted habitats. Overall these data can serve as a baseline proxy for understanding palaeontological assemblages of foraminifera in similar shallow-water settings globally.

Contrasting dynamics and environmental controls of dispersed bacteria along a hydrologic gradient

Freshwater bacterioplankton communities are influenced by the transport of bacteria from the surrounding terrestrial environments. It has been shown that, although most of these dispersed bacteria gradually disappear along the hydrologic continuum, some can thrive in aquatic systems and become dominant, leading to a gradual succession of communities. Here we aimed at exploring the environmental factors driving the structure of such contrasting bacterial populations as well as their functional properties. Using Illumina sequencing of the 16S rRNA gene, we characterized the taxonomic composition of bacterioplankton communities from 10 streams and rivers in Québec spanning the whole hydrologic continuum (river Strahler order 0 to 7), which were sampled in two occasions. With the aim to understand the fate and controls of the transported bacteria, among the taxa present at the origin of the hydrologic gradient (i.e., in the smallest headwater streams) we identified two types of dynamics: i) ‘Tourist’ taxa, which were those that decreased in abundance from the headwaters towards the largest rivers, and ii) ‘Seed’ taxa, those that increased their abundances along the hydrologic continuum. Communities changed gradually from the fast-flowing headwater streams dominated by ‘Tourist’ taxa (ca. 95% of the sequences) towards the largest rivers (Strahler order 4-7) where ‘Seed’ taxa comprised up to 80% of community sequences. Variation in taxonomic composition of the communities dominated by ‘Tourist’ taxa in streams seemed related to different degree of terrestrial inputs, whereas compositional changes in ‘Seed’ communities in the large rivers were linked to differences in autochthonous processes. Finally, the two types of communities differed significantly in their metabolic potential assessed through Biolog Ecoplates. All this suggests that hydrologic transport modulates the gradual replacement of two contrasting population types subjected to different environmental controls and with different metabolic potentials. Moreover, we show that the separate exploration of the two pools of taxa allows unveiling environmental drivers and processes operating on them that remain hidden if explored at the whole community level.

Environmental heterogeneity, not distance, structures montane epigaeic spider assemblages in north-western Patagonia (Argentina)

There is considerable controversy around the patterns and processes that influence spatial variation in taxonomic composition in mountain environments. We analysed elevational variation in the taxonomic composition of epigaeic spider assemblages across five mountains in north-western Patagonia (Argentina) to examine the relative importance of dispersal (distance) limitation and environmental heterogeneity on a regional scale. The distance limitation hypothesis predicts greater taxonomic similarity between sampling sites separated by short geographical distances than between mountain peaks separated by longer distances, a lack of indicator species of macro-habitats, and weak associations between spider species composition and environmental gradients. Alternatively, the environmental heterogeneity hypothesis predicts that taxonomic differentiation will occur over short distances along elevation gradients in association with the turnover in major habitats and change in environmental conditions, and that indicator species will be present. We collected spiders using 486 pitfall traps arranged in fifty-four 100-m2 grid plots of nine traps separated by ~ 100 m of elevation, from the base to the summit of each mountain. Multivariate analyses identified spider assemblages that were associated with macro-habitats rather than with mountains. Local environmental variation (mainly in vegetation cover), precipitation and soil characteristics influenced the spatial variation in species composition. Characteristic indicator species showed high specificity and fidelity to macro-habitats, whereas vulnerable species showed high specificity and low fidelity to mountains or macro-habitats. We conclude that, on a regional scale, species adaptation to environmental gradients plays a more important role than dispersal limitation in structuring the taxonomic composition of spider assemblages. Moreover, the presence of indicator species suggests that spiders have a great potential as ecological indicators for evaluating the response of montane biodiversity to future climatic change.

Landscape variables influence taxonomic and trait composition of insect assemblages in Neotropical savanna streams

Summary Stream invertebrate assemblages are structured by environmental factors acting at multiple spatial scales. Identifying the spatial scale that most influences the species–environment relationships is a major goal of community ecology. We evaluated the importance of catchment and site scales and associated environmental variables in shaping Ephemeroptera, Plecoptera and Trichoptera (EPT) assemblages in Neotropical savanna headwater streams. Sampling sites were associated with 20 catchment‐scale variables that depicted land cover and land use as well as natural geophysical variables such as altitude and climate. Site‐scale habitat was characterised by 55 variables that described habitat hydromorphology, substrate, flow, canopy, in‐stream cover and water quality. EPT traits were assessed using 28 categories of 7 biological traits, which represented the best available current knowledge for EPT in Neotropical savanna streams. We analysed the relationships between the catchment‐ and site‐scale habitat variables and the taxonomic and trait composition of insect assemblages using 1,760 samples collected in 160 stream sites. Catchment‐ and site‐scale variables both explained significant variation in EPT taxon and trait composition. Substrate, habitat hydromorphology and land use most influenced variation in taxonomic composition, whereas trait composition was mainly affected by land use. Catchment geographic position explained less assemblage variation. To our knowledge, this study is the first assessment of the impact of catchment‐ and site‐scale variables on the trait and taxon composition of stream insect assemblages in Neotropical savanna streams. It highlights the need for better regional biological knowledge of invertebrates to generate more general trait‐based approaches in freshwater ecosystem conservation.

Taxonomic variability and functional stability in microbial communities infected by phages.

Microbial communities can display large variation in taxonomic composition, yet this variation can coincide with stable metabolic functional structure and performance. The mechanisms driving the taxonomic variation within functional groups remain largely unknown. Biotic interactions, such as predation by phages, have been suggested as potential cause of taxonomic turnover, but the conditions for this scenario have not been rigorously examined. Further, it is unknown how predation by phages affects community function, and how these effects are modulated by functional redundancy in the communities. Here, we address these questions using a model for a methanogenic microbial community that includes several interacting metabolic functional groups. Each functional group comprises multiple competing clades, and each clade is attacked by a specialist lytic phage. Our model predicts that phages induce intense taxonomic turnover, resembling the variability observed in previous experiments. The functional structure and performance of the community are also disturbed by phage predation, but they become more stable as the functional redundancy in the community increases. The extent of this stabilization depends on the particular functions considered. Our model suggests mechanisms by which functional redundancy stabilizes community function and supports the interpretation that biotic interactions promote taxonomic turnover within microbial functional groups.

Compositional variability of Pleistocene land snail assemblages preserved in a cinder cone volcano from Tenerife, Canary Islands

A Pleistocene land snail rich scoria sequence was studied to determine if it was influenced by taphonomic bias, climate change, or both, using a multifaceted approach that combines taphonomic, ecological, body size, and stable isotope data. Shell assemblages were sampled from two layers (Units A and B) in a cinder cone volcano of southern Tenerife (Canary Islands), dated to the glacial interval MIS 8 (~299–302ka). The two units differed in taphonomy, species composition, and abundance, with the upper Unit B showing higher diversity, abundance, and lower alteration than the lower Unit A. Larger bodied species dominated Unit A and were better preserved than smaller species. These mismatches likely resulted from physical differences in the sediment matrix surrounding fossils, with larger scoria grains of Unit A enhancing destruction rates and thus favoring preservation of larger (more durable) taxa than smaller scoria grains of Unit B. Comparisons with modern assemblages from the coastal scrub, the plant biome in which the Pleistocene site currently resides, indicates that no modern analogue exists for these fossil assemblages within this biome. Shell oxygen isotope values reveal that the local climate was colder/wetter during MIS 8 than at present, which also may explain variations in species composition through time. These data suggest that both taphonomic and climatic factors appear to have induced temporal variations in taxonomic composition, but it is difficult to determine which of these has more significantly influenced the observed results.

Effects of water level fluctuation on phytoplankton succession in Poyang Lake, China – A five year study

Poyang Lake is the largest freshwater lake in the Yangtze floodplain in China, with dramatic seasonal water level changes each year. The quarterly monitoring data from 2009 to 2013 was used to study the impact of the water level fluctuation on the phytoplankton biomass and taxonomic composition variation in different hydrological phases in Poyang Lake. Bacillariophyta species are generally dominant in Poyang Lake, constituting more than 50% of the total phytoplankton biomass, except from July 2009 and January 2012. The results that phytoplankton biomass increased gradually from 2009 to 2013, especially after 2012, indicated there is some time lag in the response of phytoplankton biomass to nutrient loading in Poyang Lake. Our results support the hypothesis that water level fluctuation exert great influence on phytoplankton succession and hydrology fluctuations have an indirect impact on a decrease of Cyanophyta biomass with regard to dilution of nutrients (P, N) in Poyang Lake. This study indicates that we should keep the water level changes more or less as they are because ecologically relevant in Poyang Lake.