Body Shape Variation Research Articles

Objectively measuring subjectively described traits: geographic variation in body shape and caudal coloration pattern within Vieja melanura (Teleostei: Cichlidae)

Vieja melanura is a Neotropical cichlid occurring in the Petén-lake district systems of Guatemala, as well as the Río Grijalva-Usumacinta basin, and other systems in Southern México, Belize, and Guatemala. A caudal stripe, extending forward from the caudal peduncle, is characteristic of this species. This stripe is sloped downward in nearly all individuals of V. melanura, but the degree of the slope is highly variable throughout its range. The slope and shape of the stripe has previously been used in diagnosing and differentiating between species of Vieja. The purpose of this study was to use objective methods to investigate morphological variation in the caudal stripe and body shape throughout the range of V. melanura. We studied geometric morphometric analyses of body shape and empirical measurements of the slope of the caudal stripe in 215 specimens of V. melanura. We also used the mitochondrial cytochrome b marker to study population level patterns within V. melanura. Results from our analyses showed significant geographic variation in body shape and patterns of coloration with little mitochondrial phylogeographic structure. These patterns likely correspond to differences in riverine habitats throughout the species’ distribution. In conclusion, these results can be used to inform other studies of color and shape variation as it applies to taxonomy and systematics.

Genetic and Morphological Variation in Non-Polyphenic Southern African Populations of the Desert Locust

This study addresses geographic variation of body size and shape and of allele frequencies at 21 microsatellite loci in southern African populations of the desert locust, Schistocerca gregaria. These populations, which belong to the subspecies S. g. flaviventris, lack the capacity to change phase and to swarm relative to the northern populations of the nominate subspecies, S. g. gregaria. We reported overall genetic and morphological similarities among localities that cover most of the subspecies range. Of particular interest, the level of genetic diversity was moderately lower than in the swarming subspecies of the northern range. In addition, S. g. flaviventris populations were genetically homogeneous, such as observed in the northern range of the nominate subspecies. This result can be explained by north—southwest seasonal migration to follow rainfall.

Genomewide SNP data reveal cryptic phylogeographic structure and microallopatric divergence in a rapids-adapted clade of cichlids from the Congo River.

The lower Congo River is a freshwater biodiversity hot spot in Africa characterized by some of the world's largest rapids. However, little is known about the evolutionary forces shaping this diversity, which include numerous endemic fishes. We investigated phylogeographic relationships in Teleogramma, a small clade of rheophilic cichlids, in the context of regional geography and hydrology. Previous studies have been unable to resolve phylogenetic relationships within Teleogramma due to lack of variation in nuclear genes and discrete morphological characters among putative species. To sample more broadly across the genome, we analysed double-digest restriction-associated sequencing (ddRAD) data from 53 individuals across all described species in the genus. We also assessed body shape and mitochondrial variation within and between taxa. Phylogenetic analyses reveal previously unrecognized lineages and instances of microallopatric divergence across as little as ~1.5km. Species ranges appear to correspond to geographic regions broadly separated by major hydrological and topographic barriers, indicating these features are likely important drivers of diversification. Mitonuclear discordance indicates one or more introgressive hybridization events, but no clear evidence of admixture is present in nuclear genomes, suggesting these events were likely ancient. A survey of female fin patterns hints that previously undetected lineage-specific patterning may be acting to reinforce species cohesion. These analyses highlight the importance of hydrological complexity in generating diversity in certain freshwater systems, as well as the utility of ddRAD-Seq data in understanding diversification processes operating both below and above the species level.

Introgressive hybridization and morphological transgression in the contact zone between two Mediterranean Solea species.

Hybrid zones provide natural experiments where new combinations of genotypes and phenotypes are produced. Studying the reshuffling of genotypes and remodeling of phenotypes in these zones is of particular interest to document the building of reproductive isolation and the possible emergence of transgressive phenotypes that can be a source of evolutionary novelties. Here, we specifically investigate the morphological variation patterns associated with introgressive hybridization between two species of sole, Solea senegalensis and Solea aegyptiaca. The relationship between genetic composition at nuclear loci and individual body shape variation was studied in four populations sampled across the hybrid zone located in northern Tunisia. A strong correlation between genetic and phenotypic variation was observed among all individuals but not within populations, including the two most admixed ones. Morphological convergence between parental species was observed close to the contact zone. Nevertheless, the samples taken closest to the hybrid zone also displayed deviant segregation of genotypes and phenotypes, as well as transgressive phenotypes. In these samples, deviant body shape variation could be partly attributed to a reduced condition index, and the distorted genetic composition was most likely due to missing allelic combinations. These results were interpreted as an indication of hybrid breakdown, which likely contributes to postmating reproductive isolation between the two species.

Terminal-instar larval systematics and biology of west European species of Ormyridae associated with insect galls (Hymenoptera, Chalcidoidea).

A systematic study of the genus Ormyrus (Chalcidoidea, Ormyridae) was conducted based on the morphology and biology of the terminal-instar larvae of ten west European species that are parasitoids of gall wasps and gallflies of the families Cynipidae, Eurytomidae and Tephritidae. The first detailed descriptions are provided of the terminal-instar larvae of these ten species using SEM images to illustrate diagnostic characters with systematic values. A key is provided for the identification of ormyrid larvae associated with galls in Europe, which is based particularly on characters of the head, mouthparts and mandibles. Although only limited informative variation in body shape was found, the setation of the head provided several characters of potential taxonomic value. The larval biology of the ten ormyrid species inhabiting different galls is also summarised. Although Ormyrus larvae are usually solitary idiobiont ectoparasitoids of the host larva of various gall-inhabiting insects, evidence of secondary phytophagy was observed in some species.

Morphological variation among populations of Hemigrammus coeruleus (Characiformes: Characidae) in a Negro River tributary, Brazilian Amazon

ABSTRACT We explored patterns of phenotypic variation in Hemigrammus coeruleus from the Unini River basin, a blackwater river in the Brazilian Amazon. Geometric morphometrics was used to evaluate variation in body shape among populations from four tributaries (UN2-UN5). We found no evidence for sexual dimorphism in body size and shape. However, morphological differences among populations were detected as the analyses recovered significant groups corresponding to each sub-basin, with some overlap among them. The populations from UN2, UN3 and UN5 had more elongate bodies than fish from UN4. The most morphologically divergent population belonged to UN4, the tributary with the most divergent environmental conditions and the only one with seasonally-muddy waters. The morphological variation found among these populations is likely due to phenotypic plasticity or local adaptation, arising as a product of divergent ecological selection pressures among sub-basins. This work constitutes one of the first to employ a population-level geometric morphometric approach to assess phenotypic variation in Amazonian fishes. This method was able to distinguish subtle differences in body morphology, and its use with additional species can bring novel perspectives on the evaluation of general patterns of phenotypic differentiation in the Amazon.

Morphological divergence of lake and stream Phoxinus of Northern Italy and the Danube basin based on geometric morphometric analysis.

Minnows of the genus Phoxinus are promising candidates to investigate adaptive divergence, as they inhabit both still and running waters of a variety of altitudes and climatic zones in Europe. We used landmark‐based geometric morphometric methods to quantify the level of morphological variability in Phoxinus populations from streams and lakes of Northern Italy and the Danube basin. We analyzed body shape differences of populations in the dorsal, lateral, and ventral planes, using a large array of landmarks and semilandmarks. As the species identification of Phoxinus on morphological characters is ambiguous, we used two mitochondrial genes to determine the genetic background of the samples and to ensure we are comparing homogenous groups. We have found significant body shape differences between habitats: Minnow populations inhabiting streams had a deeper body and caudal peduncle and more laterally inserted pectoral fins than minnows inhabiting lakes. We have also found significant body shape differences between genetic groups: Italian minnows had deeper bodies, deeper and shorter caudal peduncles, and a shorter and wider gape than both groups from the Danube. Our results show that the morphology of Phoxinus is highly influenced by habitat and that body shape variation between habitats was within the same range as between genetic groups. These morphological differences are possibly linked to different modes of swimming and foraging in the respective habitats and are likely results of phenotypic plasticity. However, differences in shape and interlandmark distances between the groups suggest that some (though few) morphometric characters might be useful for separating Phoxinus species.

Species traits and channel architecture mediate flow disturbance impacts on invertebrate drift

Summary Pulsed flow disturbances strongly influence invertebrate drift in lotic ecosystems. However, drift‐flow relationships are often context dependent and non‐intuitive, suggesting that local abiotic and biotic conditions mediate the impacts of flow on the physical and behavioural drivers of drift entry. Two factors may be particularly important: physical channel architecture, which modulates how flow influences velocity and habitat area; and species traits, which determine behavioural responses to flow and susceptibility to passive entrainment. We examined how channel architecture and species traits (e.g. mobility, body size, and dislodgement susceptibility) mediated the effects of flow on bulk drift abundance and taxa‐specific per capita drift rates (the rate of emigration from the benthos). In complementary experiments, we reduced and increased flows in stream mesocosms with contrasting cross‐sectional channel profiles: concave channels, where habitat area contracted and expanded with altered flow but velocity remained relatively constant; and flat channels, which maintained constant habitat area but experienced greater changes in velocity. Total drift concentration increased following flow reductions and decreased following flow increases whereas drift flux (the total number drifting) showed the opposite pattern. Channel architecture did not influence drift during flow reductions, but during flow increases drift flux and concentration were amplified in flat channels that experienced larger increases in velocity and shear stress. Contrasting responses among individual taxa to flow manipulation were explained by variation in mobility (swimming and crawling ability) and body shape (susceptibility to drag). Per capita drift rates for the most mobile taxa increased c. 10% under flow reduction, indicating a behavioural response, whereas drift of other taxa declined. Per capita drift increased for all taxa following elevated flow but by the largest magnitude in taxa with body shapes that experience more drag, suggesting passive dislodgement. Our results imply that: (i) stream channel architecture can modify the impacts of flow increases on stream invertebrates; and (ii) invertebrate taxa vary in their vulnerability and behavioural responses to flow disturbance. Together these inferences clarify some of the previously unexplained context‐dependent responses of drift to flow disturbances.

Creating Body Shapes From Verbal Descriptions by Linking Similarity Spaces

Brief verbal descriptions of people’s bodies (e.g., “curvy,” “long-legged”) can elicit vivid mental images. The ease with which these mental images are created belies the complexity of three-dimensional body shapes. We explored the relationship between body shapes and body descriptions and showed that a small number of words can be used to generate categorically accurate representations of three-dimensional bodies. The dimensions of body-shape variation that emerged in a language-based similarity space were related to major dimensions of variation computed directly from three-dimensional laser scans of 2,094 bodies. This relationship allowed us to generate three-dimensional models of people in the shape space using only their coordinates on analogous dimensions in the language-based description space. Human descriptions of photographed bodies and their corresponding models matched closely. The natural mapping between the spaces illustrates the role of language as a concise code for body shape that captures perceptually salient global and local body features.

Ontogeny of modern human longitudinal body and transverse shoulder proportions

Whereas variation of modern human adult body size and shape has been widely studied in the context of ecogeographical clines, little is known about the differential growth patterns of transverse and longitudinal dimensions among human populations. Our study explored the ontogenetic variation of those body proportions in modern humans. We compared results from four different approaches to study cross-sectional skeletal samples of Africans (n = 43), Amerindians (n = 69) and Europeans (n = 40) from 0 to 14 years of age. Clavicle, humerus, and femur intermetaphyseal lengths, and femoral distal metaphyseal breadth, were measured. Average ontogenetic trajectories were computed in order to compare the growth patterns of the three groups. Our findings demonstrated that the three geographical groups shared similar absolute and relative patterns of change with age for the four dimensions considered. Although interpopulation differences existed in transverse to longitudinal as well as in interlimb proportions, those differences did not seem to remain constant throughout ontogeny, similar to what has been shown for intralimb proportions. Growth rates of transverse shoulder proportions differed between populations from different regions after 10 years, whereas those for longitudinal proportions were very similar. The ontogeny of transverse shoulder proportions is more complex than what is observed for bi-iliac breadth, suggesting that transverse shoulder to limb proportions are not solely influenced by ecogeographical conditions. Our analysis demonstrates that methodologies that incorporate critical dimensions of body form could shed new light on human adaptation in both paleontological and neontological contexts.

Population divergence in fish elemental phenotypes associated with trophic phenotypes and lake trophic state.

Studies of ecological stoichiometry typically emphasize the role of interspecific variation in body elemental content and the effects of species or family identity. Recent work suggests substantial variation in body stoichiometry can also exist within species. The importance of this variation will depend on insights into its origins and consequences at various ecological scales, including the distribution of elemental phenotypes across landscapes and their role in nutrient recycling. We investigated whether trophic divergence can produce predictable patterns of elemental phenotypes among populations of an invasive fish, the white perch (Morone americana), and whether elemental phenotypes predict nutrient excretion. White perch populations exhibited a gradient of trophic phenotypes associated with landscape-scale variation in lake trophic state. Perch body chemistry varied considerably among lakes (from 0.09 for % C to 0.31-fold for % P) casting doubt on theassumption of homogenous elemental phenotypes. This variation was correlated with divergence in fish body shape and other trophic traits. Elemental phenotypes covaried (r (2) up to 0.84) with lake trophic state. This covariation likely arose in contemporary time since many of these perch populations were introduced in the last century and the trophic state in many of the lakes has changed in the past few decades. Nutrient excretion varied extensively among populations, but was not readily related to fish body chemistry or lake trophic state. This suggests that predictable patterns of fish body composition can arise quickly through trophic specialization to lake conditions, but such elemental phenotypes may not translate to altered nutrient recycling by fish.

Variability in body size and shape of UK offshore workers: A cluster analysis approach

Male UK offshore workers have enlarged dimensions compared with UK norms and knowledge of specific sizes and shapes typifying their physiques will assist a range of functions related to health and ergonomics. A representative sample of the UK offshore workforce (n = 588) underwent 3D photonic scanning, from which 19 extracted dimensional measures were used in k-means cluster analysis to characterise physique groups. Of the 11 resulting clusters four somatotype groups were expressed: one cluster was muscular and lean, four had greater muscularity than adiposity, three had equal adiposity and muscularity and three had greater adiposity than muscularity. Some clusters appeared constitutionally similar to others, differing only in absolute size. These cluster centroids represent an evidence-base for future designs in apparel and other applications where body size and proportions affect functional performance. They also constitute phenotypic evidence providing insight into the ‘offshore culture’ which may underpin the enlarged dimensions of offshore workers.

The evolution of body size and shape in the human career.

Body size is a fundamental biological property of organisms, and documenting body size variation in hominin evolution is an important goal of palaeoanthropology. Estimating body mass appears deceptively simple but is laden with theoretical and pragmatic assumptions about best predictors and the most appropriate reference samples. Modern human training samples with known masses are arguably the 'best' for estimating size in early bipedal hominins such as the australopiths and all members of the genus Homo, but it is not clear if they are the most appropriate priors for reconstructing the size of the earliest putative hominins such as Orrorin and Ardipithecus The trajectory of body size evolution in the early part of the human career is reviewed here and found to be complex and nonlinear. Australopith body size varies enormously across both space and time. The pre-erectus early Homo fossil record from Africa is poor and dominated by relatively small-bodied individuals, implying that the emergence of the genus Homo is probably not linked to an increase in body size or unprecedented increases in size variation. Body size differences alone cannot explain the observed variation in hominin body shape, especially when examined in the context of small fossil hominins and pygmy modern humans.This article is part of the themed issue 'Major transitions in human evolution'.

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Body Shape Variation and Population Genetic Structure ofRhoadsia altipinna(Characidae: Rhoadsiinae) in Southwestern Ecuador

The genus Rhoadsia is endemic to western Ecuador and northern Peru and includes two described species that differ in body form, size, and the elevations at which they occur. Unfortunately, there is uncertainty about the number of species that should be recognized in the genus and the causes of the morphological variation documented within and between species. We take advantage of a survey of the fish fauna of the Santa Rosa River in southwestern Ecuador that yielded large numbers of Rhoadsia altipinna, to expand knowledge of the ecological, morphological, and genetic variation of this species. Specimens were collected at five sites at elevations between 31 and 613 m above sea level, and each site was sampled in December 2012 and July 2013. Rhoadsia altipinna was the second most abundant species in the Santa Rosa River, was one of only three species collected at all elevations, and was more common in pool mesohabitats than riffle mesohabitats. Geometric morphometric analysis of body shape variation indicat...

Extremophile Poeciliidae: multivariate insights into the complexity of speciation along replicated ecological gradients.

BackgroundReplicate population pairs that diverge in response to similar selective regimes allow for an investigation of (a) whether phenotypic traits diverge in a similar and predictable fashion, (b) whether there is gradual variation in phenotypic divergence reflecting variation in the strength of natural selection among populations, (c) whether the extent of this divergence is correlated between multiple character suites (i.e., concerted evolution), and (d) whether gradual variation in phenotypic divergence predicts the degree of reproductive isolation, pointing towards a role for adaptation as a driver of (ecological) speciation. Here, we use poeciliid fishes of the genera Gambusia and Poecilia that have repeatedly evolved extremophile lineages able to tolerate high and sustained levels of toxic hydrogen sulfide (H2S) to answer these questions.ResultsWe investigated evolutionary divergence in response to H2S in Gambusia spp. (and to a lesser extent Poecilia spp.) using a multivariate approach considering the interplay of life history, body shape, and population genetics (nuclear miscrosatellites to infer population genetic differentiation as a proxy for reproductive isolation). We uncovered both shared and unique patterns of evolution: most extremophile Gambusia predictably evolved larger heads and offspring size, matching a priori predictions for adaptation to sulfidic waters, while variation in adult life histories was idiosyncratic. When investigating patterns for both genera (Gambusia and Poecilia), we found that divergence in offspring-related life histories and body shape were positively correlated across populations, but evidence for individual-level associations between the two character suites was limited, suggesting that genetic linkage, developmental interdependencies, or pleiotropic effects do not explain patterns of concerted evolution. We further found that phenotypic divergence was positively correlated with both environmental H2S-concentration and neutral genetic differentiation (a proxy for gene flow).ConclusionsOur results suggest that higher toxicity exerts stronger selection, and that divergent selection appears to constrain gene flow, supporting a scenario of ecological speciation. Nonetheless, progress toward ecological speciation was variable, partially reflecting variation in the strength of divergent selection, highlighting the complexity of selective regimes even in natural systems that are seemingly governed by a single, strong selective agent.Electronic supplementary materialThe online version of this article (doi:10.1186/s12862-016-0705-1) contains supplementary material, which is available to authorized users.

Are sympatrically speciating Midas cichlid fish special? Patterns of morphological and genetic variation in the closely related species Archocentrus centrarchus.

Established empirical cases of sympatric speciation are scarce, although there is an increasing consensus that sympatric speciation might be more common than previously thought. Midas cichlid fish are one of the few substantiated cases of sympatric speciation, and they formed repeated radiations in crater lakes. In contrast, in the same environment, such radiation patterns have not been observed in other species of cichlids and other families of fish. We analyze morphological and genetic variation in a cichlid species (Archocentrus centrarchus) that co‐inhabits several crater lakes with the Midas species complex. In particular, we analyze variation in body and pharyngeal jaw shape (two ecologically important traits in sympatrically divergent Midas cichlids) and relate that to genetic variation in mitochondrial control region and microsatellites. Using these four datasets, we analyze variation between and within two Nicaraguan lakes: a crater lake where multiple Midas cichlids have been described and a lake where the source population lives. We do not observe any within‐lake clustering consistent across morphological traits and genetic markers, suggesting the absence of sympatric divergence in A. centrarchus. Genetic differentiation between lakes was low and morphological divergence absent. Such morphological similarity between lakes is found not only in average morphology, but also when analyzing covariation between traits and degree of morphospace occupation. A combined analysis of the mitochondrial control region in A. centrarchus and Midas cichlids suggests that a difference between lineages in the timing of crater lake colonization cannot be invoked as an explanation for the difference in their levels of diversification. In light of our results, A. centrarchus represents the ideal candidate to study the genomic differences between these two lineages that might explain why some lineages are more likely to speciate and diverge in sympatry than others.

Research Article: Morphology of pumpkinseed sunfish (Lepomis gibbosus) is related to water body size

Abstract Morphological diversity was analyzed in pumpkinseed sunfish (Lepomis gibbosus) between a lake (40.5 ha) and a pond (4 ha) at the Huyck Preserve and Biological Research Station in upstate New York. The hypotheses were (1) fish from the lake and pond would differ in body shape due to different biotic/abiotic factors in each water body, and (2) there would be a difference in variance in body shape between the lake and the pond due to differences in the availability of niches. Body shape variation was examined using geometric morphometrics, and parametric statistics were used to identify differences in body shape, and differences in the variance in body shape, between fish from the pond and the lake. Fish from the pond were, on average, slightly deeper bodied for a given body size; however, there was substantial overlap in variation, so this variation may not be ecologically significant even though it is statistically significant. The variance in components of body shape also differed between the pon...

Quantitative trait locus analysis of body shape divergence in nine-spined sticklebacks based on high-density SNP-panel.

Heritable phenotypic differences between populations, caused by the selective effects of distinct environmental conditions, are of commonplace occurrence in nature. However, the actual genomic targets of this kind of selection are still poorly understood. We conducted a quantitative trait locus (QTL) mapping study to identify genomic regions responsible for morphometric differentiation between genetically and phenotypically divergent marine and freshwater nine-spined stickleback (Pungitius pungitius) populations. Using a dense panel of SNP-markers obtained by restriction site associated DNA sequencing of an F2 recombinant cross, we found 22 QTL that explained 3.5–12.9% of phenotypic variance in the traits under investigation. We detected one fairly large-effect (PVE = 9.6%) QTL for caudal peduncle length–a trait with a well-established adaptive function showing clear differentiation among marine and freshwater populations. We also identified two large-effect QTL for lateral plate numbers, which are different from the lateral plate QTL reported in earlier studies of this and related species. Hence, apart from identifying several large-effect QTL in shape traits showing adaptive differentiation in response to different environmental conditions, the results suggest intra- and interspecific heterogeneity in the genomic basis of lateral plate number variation.

Tracking human poses in various scales with accurate appearance

Building a robust and fully automatic framework for human motion tracking in 2D images and videos remains a challenging task in computer vision due to cluttered backgrounds, self-occlusions, variations of body shape and complexities of human postures. In this paper we propose a robust framework for human motion tracking without motion priors. The proposed framework builds an accurate/uncontaminated specific appearance model and then tracks the target’s postures with this specific appearance model. The main contribution of this work is a novel process to build an accurate appearance model by identifying non-target pixels and removing them. In addition, for the goal of tracking in multiple scales, a novel strategy for scale evaluation and adjustment is proposed to adaptively change the scale values during the tracking process. Experiments show that the accurate specific appearance model outperforms existing work, and the proposed tracking system is able to successfully track challenging sequences with different appearances, motions, scales and angles of view.