Abstract Continuous adaptation of international standards for medical devices requires recurrent modification of test benches. A universal control unit using an open software environment is presented to simplify the maintenance of various test benches. Our developed control unit is equipped with a Raspberry Pi 4, with standard communication interfaces and application-specific electronic assemblies. The software is based on Node-RED, a browser-based editor. A measuring setup was adapted for a flow perfusion system. Our control unit simplifies the handling of the flow perfusion system by controlling a hydraulic pump and all required valves. A software programmed PID algorithm adapts the speed of the pump to adjust the pressure automatically. Actuators like proportional pinch valves are handled to control volumetric flow and pressure within the circulation. Consequently, the user directly observes changes inside the system. The measured data are stored and are available for documentation.