Copyright © 2013 John Wiley & Sons, Ltd. Borneo is the third largest island in the world and famous for its majestic rainforests (Figure 1a). Southeast Asian tropical forests have the highest relative deforestation rate in the world (Canadell et al., 2007). More than 80% of the total land area of Borneo was covered with pristine forest in the 1950s; however, the high deforestation rate (1.7%year ), which is almost double that of the already intense deforestation rate of the whole Southeast Asian region, has resulted in the current estimation of forest cover being ~50% (Langner et al., 2007) (Figure 1b). Since 1965, production of tropical hardwood timber in Borneo sharply increased and reached a plateau and maximum in the early 1980s (Brookfield and Byron, 1990). Although the recent and rapid decline in timber production has been evident throughout Borneo owing to over-logging, over the past decades, more timber was exported from Borneo than from tropical Africa and Latin America combined (Curran et al., 2004). The land cover area categorized as ‘degraded forest and regrowth’, ‘cultivation forest mosaic’ and ‘dry/wet bare soil; grasslands; agriculture’ reached up to 33 million ha, ~45% of the total area of Borneo (Langner et al., 2007). Tropical forests are a major source of global hydrologic fluxes, and thus, this forest cover change has potential to significantly alter the global and regional climate and hydrologic cycling (Nobre et al., 1991;Kanae et al., 2001; Avissar andWerth, 2005). Because tropical rainforests exist where ecosystem water resources are greatest, the hydrologic changes could significantly alter ecological patterns and processes (Malhi et al., 2009; Phillips et al., 2009; Kumagai and Porporato, 2012), in turn affecting feedback to the atmosphere (Meir et al., 2006; Bonan, 2008). It is a matter of course that the drastic deforestation and forest degradation in Borneo should be anticipated to impact the regional hydro-climate; in fact, the long-term daily grid precipitation datasets (APHRODITE’s Water Resources, available via http://www.chikyu.ac.jp/precip/, Yatagai et al., 2012) over Borneo showed a significant decline in precipitation over the period 1951–2007 (Figure 1c). An abrupt decline in precipitation in the late 1980s can be seen (Figure 1c), which was consistent with a time when deforestation, i.e. logging for timber production, might have become intensive (Brookfield and Byron, 1990; Curran et al., 2004). Furthermore, it should be noted that such a decreasing trend in precipitationmight cause frequent extreme droughts and subsequent fires, resulting in more severe deforestation and forest degradation (van Nieuwstadt and Sheil, 2005; Wooster et al., 2012). A spatial distribution of atmospheric moisture convergence averaged over 1998–2010 in the eastern Pacific Ocean (built using a reanalyzed and gridded four-dimensional meteorology dataset, Japanese 25-year ReAnalysis and the JapanMeteorologicalAgencyClimateDataAssimilation System available via http://jra.kishou.go.jp/JRA-25/index_en.html) suggests less moisture convergence and divergence over Borneo compared with other regions (Figure 2a). On the other hand, the Tropical Rainfall Measuring Mission satellite measurements from 1998 to 2010 (NASA Goddard Earth Sciences Data and Information Services Center, available via http://disc.sci.gsfc.nasa.gov/ about-us) showed a larger amount of precipitation above islands of the maritime continent in the western Pacific Ocean compared with sea areas,