Trophic Interactions Research Articles

Population asynchrony within and between trophic levels have contrasting effects on consumer community stability in asubtropical lake.

Clarifying the effects of biodiversity on ecosystem stability in the context of global environmental change is crucial for maintaining ecosystem functions and services. Asynchronous changes between trophic levels over time (i.e. trophic community asynchrony) are expected to increase trophic mismatch and alter trophic interactions, which may consequently alter ecosystem stability. However, previous studies have often highlighted the stabilising mechanism of population asynchrony within a single trophic level, while rarely examining the mechanism of trophic community asynchrony between consumers and their food resources. In this study, we analysed the effects of population asynchrony within and between trophic levels on community stability under the disturbances of climate warming, fishery decline and de-eutrophication, based on an 18-year monthly monitoring dataset of 137 phytoplankton and 91 zooplankton in a subtropical lake. Our results showed that species diversity promoted community stability mainly by increasing population asynchrony both for phytoplankton and zooplankton. Trophic community asynchrony had a significant negative effect on zooplankton community stability rather than that of phytoplankton, which supports the match-mismatch hypothesis that trophic mismatch has negative effects on consumers. Furthermore, the results of the structural equation models showed that warming and top-down effects may simultaneously alter community stability through population dynamics processes within and between trophic levels, whereas nutrients act on community stability mainly through the processes within trophic levels. Moreover, we found that rising water temperature decreased trophic community asynchrony, which may challenge the prevailing idea that climate warming increases the trophic mismatch between primary producers and consumers. Overall, our study provides the first evidence that population and trophic community asynchrony have contrasting effects on consumer community stability, which offers a valuable insight for addressing global environmental change.

Dyeing waters: Does indiscriminate dye use threaten aquatic ecosystems?

Aquatic ecosystem conservation is imperative to reaching global biodiversity and sustainability targets. However, the ecological status of waters has been continuously eroded through mismanagement in the face of existing and emerging anthropogenic stressors, such as pollutants. There has been an emerging trend towards the use of dyes to manage algae and plants as well as to alter aesthetics within various aquatic environments. This artificial colouring has potential ecological implications through reductions in light levels and disruptions to thermoclines (i.e., temperature regime changes with depth). Abiotic regime shifts could in turn drive ecological cascades by depowering primary production, hampering top-down trophic interactions, and affecting evolved animal behaviours. Despite commercial dyes being marketed as acutely non-toxic, very little is known about the chronic effects of these dyes across ecological scales and contexts. We thus call for greater research efforts to understand the ecological consequences of dye usage in aquatic environments, as well as the socio-cultural drivers for its application. This emerging research area could harness approaches such as biological assays, community module experiments, remote sensing, culturomics, and social surveys to elucidate dye effects, trends, and perspectives under a pollution framework. A greater understanding of the potential effects of dye in aquatic ecosystems under relevant contexts would help to inform management decisions and regulation options, while helping to mediate ecocentric and anthropocentric perspectives.

Multiscale spatial analysis of two plant–insect interactions: effects of landscape, resource distribution, and other insects

ContextBiotic resource exploitation is a critical determinant of species’ distributions. However, quantifying resource exploitation patterns through space and time can be difficult, complicating their incorporation in spatial ecology studies. Therefore, understanding the local drivers of spatial patterns of resource exploitation may contribute to better large-scale species distribution models.ObjectivesWe investigated (1) how the resource exploitation patterns of two trophic interactions (plant–insect) are explained by insect behaviour, resource aggregation, and potential insect-insect interactions. We also analyzed how (2) resource patch size and (3) resource accessibility in a heterogeneous landscape affected host exploitation patterns.MethodsWe quantified nectar robbing by insects in the genus Bombus (bumblebees) and seed predation by Brachypterolus vestitus larvae (Antirrhinum beetle) on Antirrhinum majus L. (wild snapdragons) in the Pyrenees Mountains, Catalonia, Spain. We tested hypotheses about resource exploitation by integrating spatial analyses at multiple scales.ResultsBoth trophic interactions were aggregated, explained by the aggregation of their resource. At some scales, nectar robbing is more aggregated than the resource. Trophic interaction abundance is proportional to resource patch size, following the ideal free distribution model. Landscape features do not explain the locations exploited. Nectar robbing and seed predation occur together more often than expected.ConclusionsOur findings suggest that multiple biotic and ecological spatial factors may simultaneously affect resource exploitation at a local scale. These findings should be considered when developing agricultural projects, management plans and conservation policies.

Coral reef recovery in a remote and large marine protected area is resilient to cascading trophic interactions

Large marine protected areas (MPAs) will likely multiply worldwide to address accelerating biodiversity loss. Coral reefs are an especially at-risk ecosystem, but our understanding of whether and how large MPAs will benefit reef recovery from disturbances remains limited. Here, we evaluate how fishes influence coral reef recovery and if there are cascading trophic interactions in the fish community that influence recovery. We combine i) a meta-analysis of previous research evaluating how fishes affect coral reef succession, ii) field surveys of sharks, fishes, and benthic cover, and iii) a 2.5-year coral recruitment experiment of caged, uncaged, and partially caged settlement tiles in a remote and large MPA, in the Chagos Archipelago. In both our meta-analysis and field experiment, we found variable effects of fishes on coral recruitment with no overall significant effect, but strong control by fishes on the developing benthic communities, where fishes promote crustose coralline algae and reduce macroalgae. Within the Chagos, fishes had a positive effect on corals in protected microhabitats but a negative effect on exposed surfaces, leading to an overall neutral effect from fishes. Although mesopredatory fish abundance was negatively correlated with shark abundance, these top-down effects did not cascade down the food web through herbivores and corallivores to coral recruitment and benthic succession. Thus, our results suggest that within this large MPA, herbivores are important in limiting algae during recovery and there are compensatory responses to the loss of benthic feeding fishes and sharks, with implications for coral reef persistence in the face of global change.

Decoding Information Flow and Sensory Pollution: A Systematic Framework for Understanding Species Interactions.

Information transmission among species is a fundamental aspect of natural ecosystems that faces significant disruption from rapidly growing anthropogenic sensory pollution. Understanding the constraints of information flow on species' trophic interactions is often overlooked due to a limited comprehension of the mechanisms of information transmission and the absence of adequate analytical tools. To fill this gap, we developed a sensory information-constrained functional response (IFR) framework, which accounts for the information transmission between predator and prey. Through empirical evaluation, the IFR provided a biologically grounded explanation for the systematic variation of functional responses. Specifically, it posits that the variation of different functional-response shapes, associated with community stability, is attributable to limitations in sensory information transmission among species. This not only deepens our mechanistic understanding of species interactions but also elucidates how anthropogenic activities are reshaping species interactions and community dynamics by disrupting information exchange through sensory pollution.

Changing disturbance regimes, material legacies, and stabilizing feedbacks: Dead coral skeletons impair key recovery processes following coral bleaching.

Ecosystem responses to disturbance depend on the nature of the perturbation and the ecological legacies left behind, making it critical to understand how climate-driven changes in disturbance regimes modify resilience properties of ecosystems. For coral reefs, recent increases in severe marine heat waves now co-occur with powerful storms, the historic agent of disturbance. While storms kill coral and remove their skeletons, heat waves bleach and kill corals but leave their skeletons intact. Here, we explored how the material legacy of dead coral skeletons modifies two key ecological processes that underpin coral reef resilience: the ability of herbivores to control macroalgae (spatial competitors of corals), and the replenishment of new coral colonies. Our findings, grounded by a major bleaching event at our long-term study locale, revealed that the presence of structurally complex dead skeletons reduced grazing on turf algae by ~80%. For macroalgae, browsing was reduced by >40% on less preferred (unpalatable) taxa, but only by ~10% on more preferred taxa. This enabled unpalatable macroalgae to reach ~45% cover in 2 years. By contrast, herbivores prevented macroalgae from becoming established on adjacent reefs that lacked skeletons. Manipulation of unpalatable macroalgae revealed that the cover reached after 1 year (~20%) reduced recruitment of corals by 50%. The effect of skeletons on juvenile coral growth was contingent on the timing of settlement relative to the disturbance. If corals settled directly after bleaching (before macroalgae colonized), dead skeletons enhanced colony growth by 34%, but this benefit was lost if corals colonized dead skeletons a year after the disturbance once macroalgae had proliferated. These findings underscore how a material legacy from a changing disturbance regime can alter ecosystem resilience properties by disrupting key trophic and competitive interactions that shape post-disturbance community dynamics.

Bat consumption by holostean fishes in the Eocene Lake Messel: insights into the trophic adaptability of extinct gars and bowfins.

Direct evidence of trophic interactions between extinct species is rarely available in the fossil record. Here, we describe fish-mammal associations from the middle Eocene of Messel (Germany), consisting of three specimens of holosteans (one Atractosteus messelensis (Lepisosteidae) and two Cyclurus kehreri (Amiidae)) each preserved with a bat specimen (Palaeochiropteryx tupaiodon) lying in close contact with its jaws. This suggests that these fishes probably died after failed swallowing attempts, with the bat wing membrane entangled in their jaws resulting in a fatal handicap. Based on data from modern gars and bowfins, A. messelensis and C. kehreri may have opportunistically attacked drowning and dying individuals or scavenged on floating/sinking carcasses. This hypothesis is also supported by the unusually high number of bat specimens preserved in the deposits of the Eocene Lake Messel, suggesting that this group of small mammals may have represented a substantial food source for generalist feeders. This is the earliest case of chiropterophagy and the first known evidence of bat consumption by lepisosteid and amiid fishes, emphasizing the high trophic variability and adaptability of these groups throughout their evolutionary histories. The newly described associations provide important information for reconstructing the Eocene Lake Messel palaeoecosystem and its trophic web.

Riparian forests shape trophic interactions in detrital stream food webs

Abstract Freshwater and terrestrial biodiversity are linked through spatial resource flows. Key examples are detrital subsidies from the riparian vegetation that form the base of food webs in small streams. Despite the central role of detritivores in these food webs, the consequences of altered riparian vegetation type and resource availability on their trophic strategies are less known. Therefore, we experimentally tested direct and indirect effects of riparian vegetation type (i.e. riparian forests present vs. absent) on trophic interactions and dietary imbalances of aquatic detritivores. To characterise trophic strategies, we used stoichiometric and isotopic differences between consumers and resources as functional measures of trophic link strength in leaf litter bags naturally colonised by stream decomposers and detritivores. Our results show that an absence of riparian forests affected stoichiometric and isotopic properties in stream detrital food webs. Where local riparian forests were absent, leaf litter showed lower C:N ratios, which only trichopteran detritivores mirrored, whereas plecopteran and crustacean detritivores showed differences in their isotopic signatures. Diverging patterns between resources and consumers could lead to a rewiring of energy flow paths and weaken the coupling between aquatic detritivores and terrestrial detritus. Consequently, our findings demonstrate that riparian forests are essential for aquatic food webs by not only influencing organisms themselves but also their trophic interactions and energy flow paths. Aquatic detritivores depending on terrestrial subsidies can be highly sensitive to local changes in their resource environment. Therefore, functionally divergent patterns between resources and consumers in recipient systems highlight how habitat properties of the donor system can affect food webs connected across ecosystem boundaries. Read the free Plain Language Summary for this article on the Journal blog.

Water availability and biological interactions shape amphibian abundance and diversity in Mediterranean temporary rivers

Amphibians, the most threatened vertebrates globally, face risks due to climate change, habitat loss, and fragmentation. Their sensitivity to environmental changes highlights their importance as ecological indicators. Temporary rivers, influenced by geological, climatic, and anthropogenic factors, play a critical role in shaping biodiversity and community structure. Some species of amphibians may be adapted to these temporary waters, a fact reflected in their life cycles and various biological traits. However, to develop effective conservation strategies for amphibians, it is essential to address the knowledge gaps surrounding the complex interactions between biological dynamics and fluvial habitat conditions. In this study, we investigated how trophic interactions between amphibians and other aquatic organisms (diatoms, macroinvertebrates, and fish), coupled with environmental factors (water availability and riparian structure), can affect amphibian abundance and diversity in temporary rivers. The study was conducted in a Mediterranean river network located in Sant Llorenç del Munt i l'Obac Natural Park (Catalonia, Spain). Our expectations were that habitats suitable for egg deposition, lacking predators (e.g. tadpole-predators and fish), and abundant in food sources would likely support higher amphibian abundance and diversity. However, water availability was identified as a crucial factor shaping abundance and diversity in the studied amphibian communities, even if it correlated with fish presence, and especially impacting amphibian species usually linked to permanent water bodies. Concerning biotic interactions, while our results suggested that amphibian populations in temporary rivers are more dependent on top-down than bottom-up interactions, the presence of aquatic predators was not as conclusive as expected, suggesting that in temporary rivers the fish-avoiding amphibian species can survive using microhabitats or breeding opportunities linked to natural river dynamics. Overall, our findings highlight the importance of considering multi-trophic interactions, hydroperiod and habitat heterogeneity in temporary river ecosystems for effective amphibian conservation.

Predicting population-level impacts of projected climate heating on a temperate freshwater fish.

Climate heating has the potential to drive changes in ecosystems at multiple levels of biological organization. Temperature directly affects the inherent physiology of plants and animals, resulting in changes in rates of photosynthesis and respiration, and trophic interactions. Predicting temperature-dependent changes in physiological and trophic processes, however, is challenging because environmental conditions and ecosystem structure vary across biogeographical regions of the globe. To realistically predict the effects of projected climate heating on wildlife populations, mechanistic tools are required to incorporate the inherent physiological effects of temperature changes, as well as the associated effects on food availability within and across comparable ecosystems. Here we applied an agent-based bioenergetics model to explore the combined effects of projected temperature increases for 2100 (1.4, 2.7, and 4.4°C), and associated changes in prey availability, on three-spined stickleback (Gasterosteus aculeatus) populations representing latitudes 50, 55, and 60°N. Our results showed a decline in population density after a simulated 1.4°C temperature increase at 50°N. In all other modeled scenarios there was an increase (inflation) in population density and biomass (per unit area) with climate heating, and this inflation increased with increasing latitude. We conclude that agent-based bioenergetics models are valuable tools in discerning the impacts of climate change on wild fish populations, which play important roles in aquatic food webs.

Heritable intraspecific variation among prey in size and movement interact to shape predation risk and potential natural selection

Abstract Predator and prey traits are important determinants of the outcomes of trophic interactions. In turn, the outcomes of trophic interactions shape predator and prey trait evolution. How species' traits respond to selection from trophic interactions depends crucially on whether and how heritable species' traits are and their genetic correlations. Of the many traits influencing the outcomes of trophic interactions, body size and movement traits have emerged as key traits. Yet, how these traits shape and are shaped by trophic interactions is unclear, as few studies have simultaneously measured the impacts of these traits on the outcomes of trophic interactions, their heritability, and their correlations within the same system. We used outcrossed lines of the ciliate protist Paramecium caudatum from natural populations to examine variation in morphology and movement behaviour, the heritability of that variation, and its effects on Paramecium susceptibility to predation by the copepod Macrocyclops albidus. We found that the Paramecium lines exhibited heritable variation in body size and movement traits. In contrast to expectations from allometric relationships, body size and movement speed showed little covariance among clonal lines. The proportion of Paramecium consumed by copepods was positively associated with Paramecium body size and velocity but with an interaction such that greater velocities led to greater predation risk for large body‐sized paramecia but did not alter predation risk for smaller paramecia. The proportion of paramecia consumed was not related to copepod body size. These patterns of predation risk and heritable trait variation in paramecia suggest that copepod predation may act as a selective force operating independently on movement and body size and generating the strongest selection against large, high‐velocity paramecia. Our results illustrate how ecology and genetics can shape potential natural selection on prey traits through the outcomes of trophic interactions. Further simultaneous measures of predation outcomes, traits, and their quantitative genetics will provide insights into the evolutionary ecology of species interactions and their eco‐evolutionary consequences. Read the free Plain Language Summary for this article on the Journal blog.

Expanding European protected areas through rewilding

Rewilding seeks to address biodiversity loss by restoring trophic interactions and fostering self-regulating ecosystems. Although gaining traction in Europe and North America, the extent to which rewilding can meet post-2020 protected-area targets remains uncertain. We formulated criteria to map suitable areas for rewilding by identifying large tracts of land with minimal human disturbances and the presence of key mammal species. We find that one-quarter of Europe, approximately 117 million hectares (ha), is compatible with our rewilding criteria. Of these, 70% are in cooler climates. Passive rewilding opportunities, focused on managing existing wilderness, are predominant in Scandinavia, Scotland, the Iberian Peninsula, and notably in the Baltic states, Ireland, and southeastern Europe. Active rewilding opportunities, marked by reintroduction of absent trophic guilds, are identified in Corsica, Sardinia, southern France, and parts of the Netherlands, Denmark, Sweden, and Norway. Our mapping supports European nations in leveraging land abandonment to expand areas for nature conservation, aligning with the European Biodiversity Strategy for 2030. Nevertheless, countries with limited potential for rewilding should consider alternative conservation strategies.

The quantity of deposited environmental DNA in plant–arthropod interactions depends on taxon, abundance and interaction time

Abstract Environmental DNA (eDNA) metabarcoding holds great promise as a simple and efficient tool to detect plant–insect interactions. However, the influence of both abiotic and biotic factors on eDNA deposition in these interactions is not well understood. It especially remains to be tested how much eDNA abundances reflect the frequency or intensity of interactions between insects and plants. We experimentally analysed the quantitative deposition of eDNA from three insect species (the southern green stink bug Nezara viridula, the mustard beetle Phaedon cochleariae and the fall armyworm Spodoptera frugiperda) on leaves of two host plants of varying attractiveness: savoy cabbage (Brassica oleracea var. sabauda, preferred host) and tomato (Solanum lycopersicum, less preferred host). We tested for the effects of insect taxonomy, host plant, exposure time and abundances of interacting insects on the plant material. Our data show a clear quantitative ecological signal in eDNA deposition. Insect abundance and interaction time are reflected in the amount of deposited eDNA. Moreover, significantly more eDNA was deposited on cabbage, the preferred host plant. Besides these ecological drivers, a very strong taxonomic eDNA deposition bias between different insect taxa was observed. eDNA detection is strongly influenced by the ecological interactions of the targeted taxa, highlighting the utility of the tool to specifically detect trophic interactions between plants and arthropods. However, taxonomic biases in eDNA deposition preclude comparative analyses of interactions at the community level.

Temperature-dependent responses and trophic interaction strengths of a predatory marine gastropod and rock oyster under ocean warming

Predator-prey interactions are important in shaping ecosystem structure. Consequently, impacts of accelerating global warming on predators will have notable implications. Effects are likely to be particularly marked for tropical organisms which are anticipated to be sensitive to further thermal stress. Here, we investigated effects of future ocean warming on the predatory dogwhelk Reishia clavigera and its predation of Saccostrea cucullata. Mortality of the predators rapidly increased under the extreme elevated temperature, while those exposed to moderate elevated temperature displayed similar mortality as the ambient. Predators that survived moderate temperature increases altered their oxygen consumption patterns, increased average feeding rates, and functional responses, although condition index and energy reserves were unchanged. Overall, we show extreme ocean warming scenarios can remove predators and their consumption of prey from an ecosystem, whereas moderate warming can intensify predator-prey interactions. Such temperature-dependent alterations to predator-prey interactions would lead to fundamental changes of ecosystem structure as the ocean warms.

DNA stable isotope probing reveals the impact of trophic interactions on bioaugmentation of soils with different pollution histories

BackgroundBioaugmentation is considered a sustainable and cost-effective methodology to recover contaminated environments, but its outcome is highly variable. Predation is a key top-down control mechanism affecting inoculum establishment, however, its effects on this process have received little attention. This study focused on the impact of trophic interactions on bioaugmentation success in two soils with different pollution exposure histories. We inoculated a 13C-labelled pollutant-degrading consortium in these soils and tracked the fate of the labelled biomass through stable isotope probing (SIP) of DNA. We identified active bacterial and eukaryotic inoculum-biomass consumers through amplicon sequencing of 16S rRNA and 18S rRNA genes coupled to a novel enrichment factor calculation.ResultsInoculation effectively increased PAH removal in the short-term, but not in the long-term polluted soil. A decrease in the relative abundance of the inoculated genera was observed already on day 15 in the long-term polluted soil, while growth of these genera was observed in the short-term polluted soil, indicating establishment of the inoculum. In both soils, eukaryotic genera dominated as early incorporators of 13C-labelled biomass, while bacteria incorporated the labelled biomass at the end of the incubation period, probably through cross-feeding. We also found different successional patterns between the two soils. In the short-term polluted soil, Cercozoa and Fungi genera predominated as early incorporators, whereas Ciliophora, Ochrophyta and Amoebozoa were the predominant genera in the long-term polluted soil.ConclusionOur results showed differences in the inoculum establishment and predator community responses, affecting bioaugmentation efficiency. This highlights the need to further study predation effects on inoculum survival to increase the applicability of inoculation-based technologies.9HmCi-USiFQRck8tFgyMqrVideo

Allelochemicals determine competition and grazing control in Alexandrium catenella

The production of allelochemicals by the toxigenic dinoflagellate Alexandrium catenella is one of the suggested mechanisms to facilitate its bloom formation and persistence by outcompeting other phototrophic protists and reducing grazing pressure. In Southern California, toxic events caused by A. catenella and paralytic shellfish toxins (PSTs) regularly impact coastal ecosystems; however, the trophic interactions and mechanisms promoting this species in a food web context are still not fully understood. In the present study, we combined a dynamical mathematical model with laboratory experiments to investigate potential toxic and allelochemical effects of an A. catenella strain isolated off the coast of Los Angeles, Southern California, on competitors and a common zooplankton consumer. Experiments were conducted using three toxigenic strains of A. catenella, comparing the new Californian isolate (Alex Cal) to two strains previously described from the North Sea, a lytic (Alex2) and non-lytic (Alex5) strain, testing for donor density-dependent effects on two phytoplankton species (Rhodomonas salina, Tetraselmis sp.) and on the rotifer Brachionus plicatilis. Bioassays revealed a steep decline in competitor and consumer populations with increasing Alex Cal concentrations, indicating an intermediate lytic activity compared to the North Sea strains (lytic Alex2 and non-lytic Alex5). The rotifer fed and grew well on the PST- toxic, but non-lytic Alex5 strain, while its survival significantly decreased with increasing concentrations of the two lytic strains Alex Cal and Alex 2, indicating that negative effects on the rotifer were mediated by allelochemicals rather than PST-toxins. Mixed culture experiments including both competitors and consumers demonstrated that the intensity of allelochemical effects not only depended on the A. catenella density but also on the target density. Negative effects on grazers were alleviated by co-occurring competitors with a lower sensitivity to allelochemicals, thus reducing harmful compounds and allowing grazing control on the dinoflagellate to come into effect again. Results from mixed culture experiments were supported by the mathematical approach used in this study which was calibrated with data from simple monoculture growth, pairwise competition and predator-prey experiments, demonstrating the applicability of this model approach to predict the outcome of more complex food web dynamics at the community level.

A framework and review of evidence of the importance of coral reefs for marine birds in tropical ecosystems.

As global heating and other anthropogenic influences alter tropical marine environments, it is unclear how marine bird populations will be impacted and whether their current roles in tropical marine ecosystems will change. Although marine birds roost and breed on tropical islands in large numbers, the direct trophic interactions between these birds and their prey across the tropics are poorly documented. We present a first framework for evaluating the dependence on and contributions of marine birds to tropical coral reef ecosystems and use it to examine the evidence for different kinds of interaction, focusing primarily on avian diets. We found 34 publications between 1967 and 2023 that presented a total of 111 data sets with enough detail for quantitative dietary analysis of tropical marine birds. Only two bird species out of 37 (5.4%) had diets of >50% coral reef fishes and only one, the Pacific Reef Egret, appeared to depend almost entirely on reef-based production. Marine birds are also prey for other marine organisms, but insufficient data are available for quantitative analysis. Evidence for indirect effects of birds in tropical marine environments is stronger than for direct dependence on coral reefs, particularly in relation to nutrient concentration and the fertilisation impacts of guano on corals. Dispersal of propagules (e.g. seeds, spores, invertebrate eggs) by bathing, drinking, resting or foraging birds is under-studied and poorly documented. Although the degradation of coral reefs appears unlikely to have a significant direct impact on food availability for most marine bird populations, indirect effects involving marine birds may be disrupted by global environmental change.

Combining biotracer and stomach contents analysis to understand trophic dynamics in the northern Gulf of Mexico

The northern Gulf of Mexico (nGOM) is a taxonomically rich ecosystem. Previous work based on a meta-analysis of stomach contents data has shown the trophic connectivity of predators and prey to be substantial. However, the trophic dynamics of many economically and ecologically important species are still not well understood. Sportfish, such as Spotted Seatrout (Cynoscion nebulosus), Red Drum (Sciaenops ocellatus), and Southern Flounder (Paralichthys lethostigma), support recreational fisheries throughout the region. Gulf Menhaden (Brevoortia patronus), a high biomass forage fish with the region's largest commercial fishery, is considered an important forage species. In this study, we use information from meta-analysis of stomach contents and stable isotope analysis to investigate the importance of prey taxa, including Gulf Menhaden, for nGOM nearshore predators. Stomach contents and stable isotope analyses are generally evaluated independently, with stomach contents used to directly identify trophic interactions, while stable isotopes of carbon (δ13C) and nitrogen (δ15N) provide insight into a consumer's long-term feeding habits. We used a multispecies trophic model, EcoDiet, developed by Hernvann et al. (2022), that integrates information of both stomach contents and stable isotopes into a single framework to estimate trophic link probabilities and diet proportions. Data in the model include n = 41 predators, n = 173 prey, and n = 497 unique predator and prey interactions. The results indicate that nGOM nearshore predators are generalists using the diverse prey base, and in concordance with previous findings, there is no single Menhaden-dependent predator. Our findings better quantify the trophic interactions of the highly diverse nGOM region and have important implications regarding future ecosystem modeling and management considerations for the Gulf Menhaden stock.

Metaproteomic analysis decodes trophic interactions of microorganisms in the dark ocean

Proteins in the open ocean represent a significant source of organic matter, and their profiles reflect the metabolic activities of marine microorganisms. Here, by analyzing metaproteomic samples collected from the Pacific, Atlantic and Southern Ocean, we reveal size-fractionated patterns of the structure and function of the marine microbiota protein pool in the water column, particularly in the dark ocean (>200 m). Zooplankton proteins contributed three times more than algal proteins to the deep-sea community metaproteome. Gammaproteobacteria exhibited high metabolic activity in the deep-sea, contributing up to 30% of bacterial proteins. Close virus-host interactions of this taxon might explain the dominance of gammaproteobacterial proteins in the dissolved fraction. A high urease expression in nitrifiers suggested links between their dark carbon fixation and zooplankton urea production. In summary, our results uncover the taxonomic contribution of the microbiota to the oceanic protein pool, revealing protein fluxes from particles to the dissolved organic matter pool.

Insights into trophic interactions: DNA metabarcoding reveals species composition in black-tailed gull fecal samples in coastal environments of South Korea.

This study explored the algae, zooplankton, macroinvertebrate, fish, and parasitic single-celled organism communities in Larus crassirostris (black-tailed gull) fecal samples from Baengnyeongdo, Hongdo, and Ulleungdo in South Korea. The fecal samples can identify key species consumed by black-tailed gull, providing insights into their, trophic interactions, and habitat dependencies. Using DNA metabarcoding, we identified algae, zooplankton, macroinvertebrate, fish, and intestinal and single-celled parasite species in the fecal samples. Parasitic single-celled organisms, such as Rhogostoma sp., Rhogostoma schuessleri, Eimeria furonis, and Aggregata eberthi, showed differing relative abundances at each sampling location, indicating variability in parasite diversity in the fecal DNA analysis of birds at each site. Intestinal parasites showed similar site-specific variability, though Clistobothrium sp. and Tetrabothrius sp. were common at all locations. Algae species, including Heterocapsa steinii, Heterocapsa niei, and Sargassum cristaefolium, also displayed habitat-specific patterns, as did zooplankton, with Calanus sp., Corycaeus speciosus, and Caprella californica being dominant on Baengnyeongdo, Hongdo, and Ulleungdo, respectively. In the macroinvertebrate communities, Octopus sinensis was prevalent at all locations but at varying abundances. Site-specific dominant fish species were also identified, with Ammodytes personatus, Decapterus maruadsi, and Arctoscopus japonicus highly predominant on Baengnyeongdo, Hongdo, and Ulleungdo, respectively. Other fish species, such as Ammodytes hexapterus, were detected in lower frequencies, suggesting a diverse diet for the seabirds. These results offer insights into the species composition and ecological dynamics in black-tailed gull populations across disparate Korean islands.