Trophic Ecology Research Articles

Trophic niche partitioning of golden cuttlefish (Sepia esculenta) during ontogeny revealed by stable isotope analysis and DNA metabarcoding

Cephalopods are becoming more important in global fishery. Understanding the trophic ecology partitioning during their ontogeny is critical to the stock assessment and fishery management. The golden cuttlefish (Sepia esculenta), one of commercially important cephalopod species has been found at different life-history stages that co-inhibit in the coastal waters of Qingdao, China. In the present study, the trophic ecology of S. esculenta was assessed by using stable isotope analysis (SIA: based δ13C and δ15N from muscle and liver tissue) and DNA metabarcoding of the stomach contents through high-throughput sequencing (HTS). SIA uncovered the variation in isotope niche and trophic position of S. esculenta during ontogeny. DNA metabarcoding showed a higher resolution of prey identification than before. The combined analysis of SIA and DNA metabarcoding indicated that diet shifts occurred in the ontogeny of S. esculenta. Paralaval and juvenile prefer zooplankton, while sub-adult and adult prefer demersal fishes. The standard ellipse area (SEAc) indicated that low isotope niche overlaps among paralaval, juvenile and sub-adult of S. esculenta, which reflect the squid foraging strategy during ontogeny. The study confirmed that S. esculenta resources can be partitioned into different life stages, suggesting a survival strategy to maintain population dynamics.

Dietary partitioning among three cryptobenthic reef fish mesopredators revealed by visual analysis, metabarcoding of gut content, and stable isotope analysis

AbstractUnderstanding how mesopredators partition their diet and the identity of consumed prey can assist in understanding the ecological role predators and prey play in ecosystem trophodynamics. Here, we assessed the diet of three common coral reef mesopredators; Pseudochromis flavivertex, Pseudochromis fridmani, and Pseudochromis olivaceus from the family Pseudochromidae, commonly known as dottybacks, using a combination of (i) visual stomach content analysis, (ii) stomach content DNA metabarcoding (18S, COI), and (iii) stable isotope analysis (δ15N, δ13C). In addition, P. flavivertex is found in two distinct color morphs in the Red Sea, providing an opportunity to analyze intra‐morph differences. These techniques revealed partitioning in the dietary composition and resource use among species. Arthropods comprised the main dietary component of P. flavivertex (18S > 60%; COI > 10%) and P. olivaceus (18S = 57.2%), while P. fridmani ingested predominantly mollusks (18S = 51.3%, COI = 24.6%). Despite being small predators, microplastics were found in the gut content of some of these fishes. Stable isotope analysis showed differences in species' isotopic niche breadth and trophic position. Pseudochromis olivaceus presented the largest isotopic niche (SEAC = 1.61‰2), while P. fridmani showed the smallest isotopic niche (SEAC = 0.45‰2) among species. Although the two techniques used for stomach content analysis did not show differences in the diet within color morphs of P. flavivertex, they differed in the isotopic niche and resource use. Despite our limited sampling, our findings provide evidence of species‐specific differences in the trophic ecology of dottybacks and demonstrate their important role as predators of cryptic invertebrates and small fishes. This study highlights the importance of combining several approaches (short‐term: visual analysis and DNA metabarcoding; and long‐term: isotope analysis) when assessing the feeding habits of coral reef fish, as they provide complementary information necessary to delimit their niches and understand the role that small mesopredators play in coral reef ecosystems.

Food web structure of fish communities of Doce River, 5years after the Fundão dam failure.

The rupture of the Fundão dam is considered the largest mining failure in history, which had a particularly detrimental impact on fish populations, as the mud from the ore tailings significantly altered the water quality and habitat of Doce River basin. This study aimed to assess the trophic structure of fish communities in areas impacted and not impacted by the dam rupture in the Doce River basin. To evaluate the food web structure, community-wide trophic niche, and trophic positions of fish, stable isotopes of carbon (δ13C) and nitrogen (δ15N) were utilized across ten sites (seven impacted and three control). In general, fish appeared to assimilate resources such as invertebrates, algae, and periphyton, although the importance of each resource varied among sites. The site closest to the dam rupture exhibited a more simplified trophic structure compared to the control sites and those nearer the river mouth. In this site, most fish species occupied a similar trophic position. Trophic niches also exhibited the greatest dissimilarity between the site closest to the dam failure and those farther away from it, with an expansion of trophic niche breadth observed with an increase in the distance from the dam rupture. Our study provided valuable insights into the trophic structure of fish communities within the Doce River basin, shedding light on the trophic ecology of the 59 fish species investigated. We also emphasize the importance of our study for future assessments of ore tailings dam failure disasters and evaluating the effectiveness of mitigation measures for Doce River basin recovery.

Distribution and stable isotope ratio characteristics of Japanese eel leptocephali in relation to hydrographic structure of their Pacific Ocean spawning area

AbstractTo understand the larval distribution, size variation, and stable isotope ratios of Japanese eel leptocephali in relation to the salinity front and their feeding ecology, larvae from 7 research cruises (2002–2013) in the North Equatorial Current (NEC) spawning area were examined. The smallest early‐stage larvae were distributed south of or near the salinity front, confirming that the salinity front is an important oceanic feature to understand spawning locations of the Japanese eel. Larger size larvae tended to distribute into higher latitudes. Transport to northern latitudes with their growth would facilitate transport into the Kuroshio region, but retention in the Subtropical Countercurrent (STCC) might be detrimental. Preleptocephalus isotope ratios reflected maternal ratios, but feeding‐stage leptocephali (8–56 mm) tended to have higher ∂15N values at lower latitudes typically in areas south of a salinity front. Feeding larvae quickly assimilate isotope ratios from the NEC after spawning and early growth. Large differences of ∂13C values of larvae between the NEC and STCC might vary with spatial baselines in the two currents. However, diel vertical migrations should be considered, because the isotope ratios in particulate organic matter distinctly depend on the depth. Comparisons among Japanese eel larvae and other taxa of leptocephali in the NEC illustrate the need for further studies on the trophic ecology of leptocephali.

Diet Diversity of the Fluviatile Masu Salmon, Oncorhynchus masou (Brevoort 1856) Revealed via Gastrointestinal Environmental DNA Metabarcoding and Morphological Identification of Contents.

Masu salmon, Oncorhynchus masou (Brevoort 1856), a commercially important fish species endemic to the North Pacific Ocean, attained national second-level protected animal status in China in 2021. Despite this recognition, knowledge about the trophic ecology of this fish remains limited. This study investigated the diet diversity of fluviatile Masu salmon in the Mijiang River, China, utilizing the gastrointestinal tract environmental DNA (GITeDNA) metabarcoding and morphological identification. The results revealed a diverse prey composition, ranging from terrestrial and aquatic invertebrates to small fishes. The fluviatile Masu salmon in general consumed noteworthily more aquatic prey than terrestrial prey. There were much more prey taxa and a higher diet diversity detected by GITeDNA metabarcoding than by morphological identification. GITeDNA metabarcoding showed that larger and older Masu salmon consumed significantly more terrestrial insects than aquatic prey species did, with 7366 verses 5012 sequences in the group of ≥20 cm, 9098 verses 4743 sequences in the group of ≥100 g and 11,540 verses 729 sequences in the group of age 3+. GITeDNA metabarcoding also showed size- and age-related diet diversity, indicating that the dietary niche breadth and trophic diversity of larger and older Masu salmon increased with food resources expanding to more terrestrial prey. Terrestrial invertebrates of riparian habitats play a vital role in the diet of fluviatile Masu salmon, especially larger individuals, highlighting their importance in connecting aquatic and terrestrial food webs. Conservation plans should prioritize the protection and restoration of riparian habitats. This study advocates the combined use of GITeDNA metabarcoding and morphological observation for a comprehensive understanding of fish diet diversity.

Understanding the feeding ecology of the broadnose sevengill shark (Notorynchus cepedianus) in Patagonia, Argentina

The broadnose sevengill shark (Notorynchus cepedianus) is classified as Vulnerable by the IUCN, and its population in the Southwest Atlantic is declining. Despite some progress in understanding the ecological requirements of the sevengill shark, there are still several information gaps. Essential aspects of its trophic ecology, such as main prey items or key feeding grounds, remain uncertain and this information is essential for developing effective conservation strategies. Stable isotopes and spontaneous regurgitations were analyzed to describe the trophic ecology of sevengill sharks within a marine protected area (MPA) of Península Valdés in Patagonia, Argentina. Analysis of spontaneous regurgitations revealed that the southern elephant seal (Mirounga leonina) was the primary prey item (70%) for the sevengill shark, during abundance peaks of both species in the MPA. However, the stable isotope analysis indicated that the teleosts were the main prey item, and the overall contribution of the elephant seal to the diet of the sevengill shark was around 30%. In addition, the contribution of each prey group varied with the size of the individuals. The estimated trophic position was 4.43, placing the species among the apex predators of the region. This study confirmed the use of the MPA as an essential foraging ground and contributed to identifying its main prey items. Also, it reflects the need to expand conservation tools beyond this particular coastal protection.

Trophic ecology of sympatric sea turtles in the tropical Atlantic coast of Brazil

The Tropical Atlantic coast of Brazil is a hotspot area for multiple sea turtle species at all life stages. The multiple nearshore reefs and beaches, oceanic islands, and the only atoll in the south Atlantic Ocean, are suitable for year-round foraging, migration corridors, and nesting activities of five sea turtle species. Still, relatively few studies have assessed trophic niche among sympatric sea turtles which can provide a better understanding of how closely related species compete/partition the available resources. Using multiple biogeochemical tracers (i.e., nitrogen (δ15N) and carbon (δ13C) stable isotopes, and mercury (Hg)), we disentangled the trophic niches of four sea turtle species – the green turtle (Chelonia mydas), the loggerhead turtle (Caretta), the hawksbill turtle (Eretmochelys imbricata), and the olive ridley turtle (Lepidochelys olivacea) – co-occurring in nesting and foraging habitats along the northeastern coast of Brazil. We found interspecific differences in isotopic and contamination niches, as well as intraspecific niche variation associated with life stage. Differences in the estimation niche models associated to life-stage in C. caretta support the notion of ontogenetic shift in habitat and diet composition previously reported for this species. Oceanic habitat signatures were observed in juvenile green turtles and adult olive turtles, while nearshore habitat signatures were observed in adult hawksbill turtles.

Niche overlap across landscape variability in summer between two large herbivores using eDNA metabarcoding.

Understanding the relationship between a species feeding strategy and its environment (trophic ecology) is critical to assess environmental requirements and improve management policies. However, measuring trophic interactions remains challenging. Among the available methods, quantifying the plant composition of a species' diet indicates how species use their environment and their associated niche overlap. Nevertheless, most studies focusing on herbivore trophic ecology ignore the influence that landscape variability may have. Here, we explored how landscape variability influences diet composition through niche overlap. We used eDNA metabarcoding to quantify the diet composition of two large herbivores of the Bialowieza Forest, red deer (Cervus elaphus) and European bison (Bison bonasus) to investigate how increasing habitat quality (i.e. higher abundance of deciduous forage species) and predation risk (i.e. density of wolf in the area) influence their diet composition and niche partitioning. Our findings indicate diet composition is non-homogeneous across the landscape, both within and between species. Red deer showed greater diet variability and lower niche overlap within species compared to bison. We detected a reduction of niche overlap for red deer with increasing predation risk, leading to more dissimilar diets, suggesting their feeding behaviour is affected by wolf presence. This correlation was not found for bison, which are rarely predated by wolf. Higher habitat quality was associated with higher niche overlap only within bison, probably due to their suboptimal feeding strategy as browsers. These results show the importance of integrating environment-induced diet variation in studies aimed at determining the landscape usage or niche overlap of a species.

Trophic niche patterns of endangered Sandelia bainsii and Amatolacypris trevelyani in the Eastern Cape, South Africa: Insights from stable isotope analysis

Abstract Despite supporting a disproportionately large fraction of the global biodiversity, freshwater ecosystems are ranked as the most highly threatened habitats ahead of both terrestrial and marine ecosystems. Furthermore, many regions are still characterized by limited knowledge on taxonomy and ecology of freshwater fishes. The need for ecological information in understudied regions is important particularly where there are recent discoveries of new species and unique lineages and for threatened and endangered taxa that require conservation management. This study evaluated the trophic ecology of two freshwater fish species Sandelia bainsii and Amatolacypris trevelyani that are both classified as endangered in the International Union for Conservation of Nature (IUCN) Red List. These two species, which are narrow‐range endemics in the Eastern Cape, South Africa, comprise allopatric lineages whose ecology is poorly known. This study used stable isotope analysis to evaluate the food web patterns, explore the trophic niche dynamics and estimate the prey source contributions for the two species in different headwater habitats. The fishes isotopic niche sizes were spatially variable, suggesting the likely importance of stochastic variation in resource availability and probable interspecific interactions. The three lineages within S. bainsii exhibited low isotopic niche overlap onto those of sympatric fishes in most habitats. Isotopic mixing model revealed that these lineages' diets were mostly dominated by gatherers/collectors. In comparison, the two lineages within A. trevelyani exhibited high niche overlap with other species and generally had variable diets. Despite the low and high niche overlap patterns of S. bainsii and A. trevelyani, respectively, the isotopic niche overlap patterns of co‐occurring species onto those of the former suggest the likely lack of competitive hierarchies. The trophic niche patterns of these two endangered species helped to shed some light on the potential invasion risks by non‐piscivorous fishes with opportunistic feeding habits, which could exert competitive interspecific interactions.

Assessment of trophic segregation amongst gentoo penguin (Pygoscelis papua) individuals in Antarctica using a non-invasive methodology

AbstractIndividual trophic specialization (ITS) refers to the trophic diversification amongst individuals within a population. The gentoo penguin (Pygoscelis papua) is considered a trophic generalist at the population level, but little is known about its individual trophic differentiation. We assessed the degree of ITS at one of its main breeding colonies: Ardley Island, South Shetland Islands. We used skin from 19 dead individuals to determine species and sex by molecular methods and a nail for stable isotope analysis of δ15N and δ13C. Isotopic niche metrics and ITS were estimated for the population and for each sex. We found a moderately high degree of ITS associated with the trophic position of the resources consumed (δ15N) for the population and both sexes, as well as a moderate degree of ITS in the foraging habitat (δ13C) for the population and females. Females showed a higher exclusive niche area, suggesting that they use resources and foraging areas that males do not, probably related to reproductive energy demands. Given the high population density of this species, ITS could function as a mechanism to decrease intraspecific competition. This combination of genetic and isotopic tools allowed us to provide relevant information on the trophic ecology of the gentoo penguin without manipulating animals or using invasive methods.

Does urbanisation have an impact on the trophic ecology of the Algerian hedgehog Atelerixalgirus in northern Algeria?

The Algerian hedgehog, which is an endemic Mediterranean species, is a nocturnal and terrestrial insectivorous mammal. Atelerixalgirus' populations are widespread in various habitats comprising human agglomeration, such as rural, suburban or natural ecosystems. However, the impact of the habitat's characteristics on its diet remains unknown in Algeria. To contribute to a better understanding of this question, we have analysed 158 faeces samples of the Algerian hedgehog in three different areas: urban, suburban and natural area. The findings show that the Algerian hedgehog is an opportunistic species. It feeds on several classes of Arthropoda, but the harvester ant Messorbarbarus dominates largely its menu with AR = 74.81% in the diverse habitats. Furthermore, the HAC and FCA analyses confirm the positive impact of the level of urbanisation and the anthropogenic activity on the Algerian hedgehog prey richness in the north of Algeria (79 prey species and 5574 individuals ingested in the urban area, compared to 64 prey species and 3188 individuals ingested in the natural zone).

Spicy food for the egg-cowries: the evolution of corallivory in the Ovulidae (Gastropoda: Cypraeoidea)

IntroductionHost-parasite associations provide very useful models to study adaptive processes. We investigated the interaction between carnivorous marine gastropods, the Ovulidae or egg-cowries, and their cnidarian food targets. Ovulidae (Fleming, 1828), is a family of specialized carnivorous caenogastropods that feed by browsing on octocorals (Anthozoa: Octocorallia: Malacalcyonacea and Scleralcyonacea) or, to a much lesser degree, on antipatharians (Anthozoa: Hexacorallia: Antipatharia) and Stylasteridae (Hydrozoa: Hydroidolina: Anthoathecata). Very scanty information is available on the phylogenetic relationships and the degree of specificity of the relationship with the cnidarians of this corallivorous lineage, especially for deep-water taxa.MethodsTo assess taxonomic identifications and investigate cnidarian/ovulid relationships in the context of their evolution, we generated an extensive molecular dataset comprising two mitochondrial (cox1 and 16S rDNA) and one nuclear gene (28S rDNA) from 524 specimens collected worldwide. The coral hosts of the ovulid species have been identified by integrating literature data with new records, employing morphological and/or molecular (the mitochondrial 16S rDNA and mtMSH, and the nuclear ITS2) markers.ResultsWe obtained a molecular phylogenetic framework for the Ovulidae, time-calibrated with nine reliable fossil records. An ancestral state reconstruction allowed to identify Hexacorallia or Hydroidolina as the most likely ancestral cnidarian host for the Ovulidae.DiscussionOur phylogenetic hypothesis revealed the existence of groups that do not completely correspond to the currently employed subfamilial arrangement. Concerning trophic ecology, while only pediculariines (Pedicularia and allied) are associated with hydrozoans (Stylasteridae), our results suggest that some ovulid lineages shifted independently between octocorals and hexacorals.

Estimating spatial variability of baseline isoscapes from fish isotopic signatures at the community level

One of the main limitations in the application of stable isotopes to marine trophic ecology is obtaining a reliable baseline upon which to calculate isotopic enrichment. Isotopic baselines are variable in space and time, influenced by several environmental factors such as terrestrial runoff, oceanic currents or primary production, and thus, investigating their patterns of variability is essential to gain confidence in the estimates of trophic position based on isotopic signatures. We here propose a multispecies and multitrophic approach to study baseline isoscapes for nitrogen (δ15N) and carbon (δ13C), which we test on the demersal community of the Northwestern Iberian Peninsula. Using a set of 372 isotopic data of 11 demersal fish species sampled during autumn, we modelled the spatial variability of the isotopic baseline (for δ15N and δ13C separately) by removing the biological effect of species identity and individual length. Using the residuals of these models, which represent the isotopic baseline anomalies, we investigated the effect of environmental variables in driving the observed spatial patterns. Our results identify clear and consistent spatial patterns for the δ13C isotopic baseline. This isoscape achieved the lowest values in the westernmost part of the study area (Galician coast) increasing towards the east (Cantabrian Sea). This spatial pattern was mostly driven by primary production and organic matter in the sediment, reflecting the influence of upwelling intensity in the δ13C isotopic baseline over the study area. Baseline isotopic anomalies of δ15N, on the other hand, did not show clear spatial patterns, suggesting that for this isotopic baseline spatial patterns at the regional scale might not be as consistent. Our study brings forward the potential of multispecies isotopic data for approximating the environmental isotopic baselines for the whole ecosystem.

A non-lethal stable isotope analysis of valued freshwater predatory fish using blood and fin tissues as alternatives to muscle tissue.

Stable isotope analysis (SIA) is widely used to study trophic ecology and food webs in aquatic ecosystems. In the case of fish, muscle tissue is generally preferred for SIA, and the method is lethal in most cases. We tested whether blood and fin clips can be used as non-lethal alternatives to muscle tissue for examining the isotopic composition of two freshwater predatory fish, European catfish (Silurus glanis) and Northern pike (Esox lucius), species of high value for many freshwater systems as well as invasive species in many others. Blood samples from the caudal vein, anal fin clips, and dorsal muscle obtained by biopsy punch were collected from four catfish and pike populations (14-18 individuals per population). Subsequently, these samples were analyzed for δ13C and δ15N. The effects of alternative tissues, study site, and fish body mass on the isotopic offset were investigated. Both species showed a correlation between the isotopic offset and the tissue type, as well as the study site, but no significant relationship with the body mass. The isotopic offsets between tissues were used to calculate the conversion equations. The results demonstrated that both blood and fin clips are suitable and less invasive alternative to muscle in SIA studies focused on European catfish and Northern pike. Blood provided better correspondence to muscle isotope values. However, our results clearly demonstrated that isotopic offsets between tissues vary significantly among populations of the same species. Therefore, obtaining a muscle biopsy from several individuals in any population is advisable to gain initial insights and establish a possible population-specific inter-tissue conversion.

Food preferences of two nudibranch species from the South China Sea revealed by fatty acid trophic markers

AbstractNudibranchs are mostly predators preying on a variety of invertebrates. The dietary preferences of tropical nudibranchs were studied by the method of fatty acid trophic markers (FATM) in order to for better understanding of their trophic ecology. For this, the fatty acid profiles of two nudibranch species from the South China Sea, Doriprismatica atromarginata (Cuvier, 1804) and Jorunna funebris (Kelaart, 1859), were analyzed and trophic markers were identified. The high level of very long chain fatty acids (from C24 to C28), which are characteristic of sponges, in nudibranchs was evidence of their predation on sponges. However, the distribution of these components differed significantly between the species. The acids 24:2Δ5,9, 25:2Δ5,9, 26:2Δ9,19, and especially 26:2Δ5,9 dominated in D. atromarginata, but were not found in J. funebris that was rich in 28:2Δ5,9 and 28:3Δ5,9,19. The significant differences in the profile of these demospongic acids indicate that these nudibranchs consumed different species of sponges. The similarity between the FATMs of J. funebris and its potential prey, the sponge Xestospongia, confirmed their predator–prey relationship. Doriprismatica atromarginata from different sites along the Vietnam coast had different FATM profiles, which showed this nudibranch as having no any strict food specialization and feeding on various Demospongiae species. The abundance of bacterial FATMs in the nudibranchs suggests the importance of bacteria in their diet. Thus, the FATM method has proven to be useful for identifying the feeding specialization and assessing the effect of food availability on the diet of these tropical nudibranch species.

Trophic ecology and coastal niche partitioning of two sympatric shark species in the Azores (mid-Atlantic)

The exploitation of marine resources has caused drastic declines of many large predatory fishes. Amongst these, sharks are of major conservation concern due to their high vulnerability to overfishing and their ecological role as top predators. The 2 protected and endangered shark species tope Galeorhinus galeus and smooth hammerhead Sphyrna zygaena use overlapping coastal areas around the globe as essential fish habitats, but data to assess their trophic ecology and niche partitioning are scarce. We provide the first comparative assessment of the trophic ecology, ontogenetic shifts, and niche partitioning of the co-occurring tope and juvenile smooth hammerhead around the Azores Islands, mid-north Atlantic, based on δ13C, δ15N, and δ34S (CNS) stable isotope analysis of muscle tissue of the sharks and their putative prey species. Overall, isotopic niches of both species indicated a reliance on similar resources throughout the sampled sizes (tope: 35-190; smooth hammerhead 54-159 cm total length), with significant ontogenetic shifts. Topes displayed a gradual shift to higher trophic levels and a more generalist diet with increasing size (increasing δ15N values and isotopic niche volumes, respectively), whereas smooth hammerhead diet shifted towards prey with lower δ34S at a constant trophic level and a more specialized diet than tope of comparable body size (decreasing δ34S and constant δ15N and δ13C values, respectively). Our results indicate contrasting ontogenetic shifts in δ13C and δ34S along with pronounced differences between niche overlap of life stages pointing to intra- and interspecific niche partitioning of habitat and prey.

Ontogenetic shifts in body form in the bull shark Carcharhinus leucas.

Recent studies have uncovered mosaic patterns of allometric and isometric growth underlying ontogenetic shifts in the body form of elasmobranch species (shark and rays). It is thought that shifts in trophic and spatial ecology through ontogeny drive these morphological changes; however, additional hypotheses relating to developmental constraints have also been posed. The bull shark (Carcharhinus leucas) is a large-bodied coastal shark that exhibits strong ontogenetic shifts in trophic and spatial ecology. In this study, we utilise a large data set covering a large number of morphological structures to reveal ontogenetic shifts in the body form of C. leucas, stratifying analyses by sex and size classes to provide fine-scale, more ecomorphologically relevant results. Our results indicate shifts in functional demands across the body through ontogeny, driven by selective pressures relating to trophic and spatial ecology driving the evolution of allometry. We also find significant differences in scaling trends between life stages, and between the sexes, highlighting the importance of utilising large, diverse datasets that can be stratified in this way to improve our understanding of elasmobranch morphological evolution. Ultimately, we discuss the implications of these results for existing ecomorphological hypotheses regarding the evolution of specific morphological structures, and pose novel hypotheses where relevant.

C and N stable isotopes enlighten the trophic behaviour of the dugong (Dugong dugon)

The dugong (Dugong dugon), a large marine mammal herbivore of the Indo-Pacific, is vulnerable to extinction at a global scale due to a combination of human-related threats including habitat degradation. The species forages on seagrass habitats (marine phanerogams) and plays a key role in the functioning and sensitivity of these declining coastal ecosystems. The trophic behaviour and plasticity of dugong populations in response to extrinsic and intrinsic factors are therefore crucial features to both dugong and seagrass conservation. Yet, this knowledge remains limited to few visual observations and analyses of mouth, stomach or faecal contents of stranded individuals. We take advantage of a long-term monitoring of stranded individuals from the endangered New Caledonian population to depict features of dugongs’ trophic ecology from Carbon and Nitrogen stable isotopes. A total of 59 dugong skin samples were used to portrait the stable isotope niche of dugongs according to their sex and maturity. In light of previous work conducted in New Caledonia, a subset of these samples was used to model the trophic mix of dugong males and females. Our stable isotope mixing models used C and N isotope values of 10 taxa bbelonging to five divisions of metazoans, plants, and chromists. Our results represent the first estimate of the species dietary niche in the isotopic space. They suggest that the diet of dugong calves overlaps more with that of adult females (δ13C: − 6.38 ± 1.13 ‰; δ15N: 2.49 ± 1.10 ‰) than males (δ13C: − 5.92 ± 1.10 ‰; δ15N: 3.69 ± 1.28 ‰). Further, we highlight differences in the expected trophic mix of dugong adult males and females. From these, we formulate a sex-specific foraging behaviour hypothesis in dugongs, whereby lactating females could forage over smaller spatial ranges but more diverse food sources thanmales. The study emphasizes the importance of long-term stranding monitoring programs to study the ecology of marine mammals.. Finally, it depicts an ecological feature that may contribute to the sensitivity of vulnerable dugongs to ongoing changes on tropical coastal ecosystems.

Sustained use of marine subsidies promotes niche expansion in a wild felid

The use of marine subsidies by terrestrial predators can facilitate substantial transfer of nutrients between marine and terrestrial ecosystems. Marine resource subsidies may have profound effects on predator ecology, influencing population and niche dynamics. Expanding niches of top consumers can impact ecosystem resilience and interspecific interactions, affecting predator-prey dynamics and competition. We investigate the occurrence, importance, and impact of marine resources on trophic ecology and niche dynamics in a highly generalist predator, the caracal (Caracal caracal), on the Cape Peninsula, South Africa. Caracals have flexible diets, feeding across a wide range of terrestrial and aquatic prey. We use carbon and nitrogen stable isotope analysis of fur samples (n = 75) to understand trophic position and niche shifts in coastal and inland foragers, as well as the implications of a diet rich in marine resources. We found significant differences in isotope signatures between these groups, with higher δ13C (P < 0.05) and δ15N values (P < 0.01) in coastal foragers. Isotope mixing models reveal that these elevated signatures were due to non-terrestrial food subsidies, where approximately a third of coastal foraging caracal diet comprised marine prey. The addition of marine prey species to diet increased both the trophic level and isotope niche size of coastal foraging caracals, with potential impacts on prey populations and competition. Our results suggest that marine prey are an important dietary resource for coastal foraging caracals, where seabirds, including two endangered species, are a major component of their diet. However, there are likely risks associated with these resource benefits, as routine consumption of seabirds is linked with higher pollutant burdens, particularly metals. Increased encounters between this terrestrial predator and seabirds may be a result of increased mainland colonies due to changes in habitat availability and the highly opportunistic and generalist foraging behaviour of a native predator.

Niche width and overlap of benthic invertebrates in surf zones increase with distance from the estuarine source of organic matter

Benthic invertebrates in the surf zone of exposed sandy beaches represent important links for energy circulation between benthic and pelagic food webs. This work assesses the trophic ecology of co-occurring epi- and hyper-benthic invertebrates inhabiting the surf zone of sandy beaches located close to an estuarine mouth. It illustrates that different sources of organic matter induce changes in resource utilization. The trophic positions, and the niche width and overlap of species were described using δ13C and δ15N stable isotope analysis. The contribution of different sources to the particulate organic matter was quantified through stable isotopes analysis and fatty acids profiles. Shifts in the trophic niches of dominant species reflected a decrease in the contribution of estuarine carbon to the diets along the coast. This change in contribution of estuarine carbon also influenced trophic niche properties: more diverse resources availability resulted in narrower niches without overlap while less diverse resources resulted in broad isotopic niches and a highest overlap. Results show that spatial variations in the availability of resources can modify carbon pathways and trophic interactions in coastal food webs. Whenever resources are abundant, species display a more specialized diet while food scarcity leads to broader diets, a pattern consistent with the optimal foraging theory. This resource maximization behavior commonly observed in nature is also occurring in surf zone ecosystems.