Tris Bipyridine Ruthenium Research Articles

Sensitive and isothermal electrochemiluminescence gene-sensing of Listeria monocytogenes with hyperbranching rolling circle amplification technology

Listeria monocytogenes (L. monocytogenes) is one of the most problematic human pathogens, as it is mainly transmitted through the food chain and cause listeriosis. Thus, specific and sensitive detection of L. monocytogenes is required to ensure food safety. In this study, we proposed a method using hyperbranching rolling circle amplification (HRCA) combined with magnetic beads based electrochemiluminescence (ECL) to offer an isothermal, highly sensitive and specific assay for the detection of L. monocytogenes. At first, a linear padlock probe was designed to target a specific sequence in the hly gene which is specific to L. monocytogenes and then ligated by Taq DNA ligase. After ligation and digestion, further amplification by HRCA with a biotiny labeled primer and a tris (bipyridine) ruthenium (TBR) labeled primer was performed. The resulting HRCA products were then captured onto streptavidin-coated paramagnetic beads and were analyzed by magnetic beads based ECL platform to confirm the presence of targets. Through this approach, as low as 10aM synthetic hly gene targets and about 0.0002ng/μl of genomic DNA from L. monocytogenes can be detected, the ability to detect at such ultratrace levels could be attributed to the powerful amplification of HRCA and the high sensitivity of current magnetic bead based ECL detection platform.

A signal-on electrochemiluminescence aptamer biosensor for the detection of ultratrace thrombin based on junction-probe

A novel signal-on junction-probe electrogenerated chemiluminescence (ECL) aptamer biosensor has been developed for the detection of ultratrace thrombin based on a structure-switching ECL-quenching mechanism. The ECL aptamer biosensor comprises two main parts: an ECL substrate and an ECL intensity switch. The ECL substrate was made by modifying the complex of Au nanoparticle and ruthenium (II) tris-bipyridine (Ru(bpy) 3 2+–AuNPs) on the surface of gold electrode (GE), and the ECL intensity switch contains three probes designed according to the “junction-probe” strategy. The first probe is capture probe (Cp) which was functionalized with a thiol group at one end and covalently attached to Ru(bpy) 3 2+–AuNPs modified GE through S–Au bonding. The second probe is aptamer probe (Ap), which containing 15-base anti-thrombin DNA aptamer. The third one is ferrocene-labeled probe (Fp), which was functionalized with ferrocene tag at one end. We demonstrated that, in the absence of thrombin, Cp, Ap and Fp will hybridize to form a ternary “Y” junction structure and resulted in a quenching of ECL of Ru(bpy) 3 2+. Whereas, in the presence of thrombin, the Ap prefers to form the G-quadruplex aptamer–thrombin complex and lead to an obvious recovery of ECL of Ru(bpy) 3 2+, which provided a sensing platform for the detection of thrombin. Using this reusable sensing platform, a simple, rapid and selective signal-on ECL aptamer biosensor for the detection of thrombin with a detection limit of 8.0 × 10 −15 M has been developed. The success in the present biosensor served as a significant step towards the development of monitoring ultratrace thrombin in clinical detection.

In Situ Reactivity and TOF-SIMS Analysis of Surfaces Prepared by Soft and Reactive Landing of Mass-Selected Ions

An instrument has been designed and constructed that enables in situ reactivity and time-of-flight secondary ion mass spectrometry (TOF-SIMS) analysis of surfaces prepared or modified through soft and reactive landing of mass-selected polyatomic cations and anions. The apparatus employs an electrospray ion source coupled to a high transmission electrodynamic ion funnel, two focusing collision quadrupoles, a large 19 mm diameter quadrupole mass filter, and a quadrupole bender that deflects the ion beam, thereby preventing neutral contaminants from impinging on the deposition surface. The ion soft landing apparatus is coupled to a commercial TOF-SIMS instrument permitting the introduction of surfaces into vacuum and SIMS analysis before and after ion deposition without breaking vacuum. To facilitate a comparison of the current TOF-SIMS instrument with the in situ Fourier transform ion cyclotron resonance (FTICR-SIMS) deposition apparatus constructed previously, dications of the cyclic peptide Gramicidin S (GS) and the photoactive organonometallic complex ruthenium tris-bipyridine (Ru(bpy)(3)) were soft-landed onto fluorinated self-assembled monolayer (FSAM) on gold surfaces. In both cases, similarities and differences were observed in the secondary ion mass spectra, with the TOF-SIMS results, in general, characterized by greater sensitivity, larger dynamic range, less fragmentation, and fewer in-plume reactions than the corresponding FTICR-SIMS spectra. The charge reduction kinetics of both the doubly and singly protonated GS cations on the FSAM surface were also examined as was the influence of the primary gallium ion (Ga(+)) flux on the efficiency of these processes. In addition, we demonstrate that the new instrument enables detailed studies of the reactivity of catalytically active species immobilized by soft and reactive landing toward gaseous reagents.

Fabrication of a New Electrochemiluminescent Sensing Interface Based on Zinc Oxide Nanorod

AbstractA new electrochemiluminescence (ECL) sensing interface was established based on the zinc oxide nanorod in this paper. Firstly, the zinc oxide (ZnO) nanorod was prepared on an indium tin oxide (ITO) electrode surface by the method of constant current cathodic electrodeposition, on which the Nafion film was then modified, and finally ruthenium(II) tris(bipyridine) (Ru(bpy)32+) was immobilized at the ZnO nanorod/Nafion composite‐modified electrode. The sensing interface shows well ECL behaviors and perfect stability after being constant temperature treatment at 80 °C. The composite electrode was characterized by EIS, SEM and XRD. The results showed that the good stability maybe related to the water content of Nafion film.

Activation of cyclopentane in aqueous medium and at room temperature using tris-bipyridine ruthenium complex as a photosensitizer.

In this study, the use of a transition metal complex, tris (2,2-bipyridine) ruthenium (II) as a photosensitizer to convert cyclopentane into other compounds in an aqueous medium and at room temperature and pressure has been investigated. Peroxydisulphate ion has been used as aradical source. The irradiation of the solutions have been carried out at 436- nm wavelength using a high pressure mercury lamp for the light source. Cyclopentanol and cyclopentanone have been obtained as organic products. The products were detected and characterized using gas chromatography and mass spectrometry methods. They were formed at concentration levels of 10-4M. The quantum yields of total product formation were about 0.2 at a light intensity of 5 x 1016 quanta/s. Dans cette étude, l’utilisation d’un complexe du métal de transition, le tris (bipyridine-2,2) ruthénium (II), comme photosensibilisateur pour transformer le cyclopentane en d’autres composés dans un milieu aqueux et à température et pression ambiantes a été examiné. Nous avonsutilisé l’ion peroxydisulfate comme souce radicale. L’irradiation des solutions s’est effectuée à 436 nm de longueur d’onde avec utilisation d’une lampe de mercure à forte pression pour la source lumineuse. Nous avons obtenu du cyclopentanol et de la cyclopentanone comme produits organiques. Pour la détection et la caractérisation des produits, nous avons eu recours aux méthodes de chromatographie de gaz et de spectrométrie de masse. Les produits étaient formés à des niveaux deconcentration de 10-4 M. Les rapports quantiques de la formation totale des produits étaient d’environ 0,2 pour une intensité lumineuse de 5 x 1016 quanta/s. Dans cette étude, l’utilisation d’un complexe du métal de transition, le tris (bipyridine-2,2) ruthénium (II), comme photosensibilisateur pour transformer le cyclopentane en d’autres composés dans un milieu aqueux et à température et pressionambiantes a été examiné. Nous avons utilisé l’ion peroxydisulfate comme souce radicale. L’irradiation des solutions s’est effectuée à 436 nm de longueur d’onde avec utilisation d’une lampe de mercure à forte pression pour la source lumineuse. Nous avons obtenu du cyclopentanol et de la cyclopentanone comme produits organiques. Pour la détection et la caractérisation des produits, nous avons eu recours aux méthodes de chromatographie de gaz et de spectrométrie de masse. Les produits étaient formés à des niveaux de concentration de 10-4 M. Les rapports quantiques de la formation totale des produits étaient d’environ 0,2 pour une intensité lumineuse de 5 x 1016 quanta/s.

Rapid and sensitive detection of point mutation by DNA ligase-based electrochemiluminescence assay

The identification of single-base mutations in particular genes plays an increasingly important role in medical diagnosis and prognosis of genetic-based diseases. Here we report a new method for the analysis of point mutations in genomic DNA through the integration of allele-specific oligonucleotide ligation assay (OLA) with magnetic beads-based electrochemiluminescence (ECL) detection scheme. In this assay, the tris(bipyridine) ruthenium (TBR) labeled probe and the biotinylated probe are designed to perfectly complementary to the mutant target; thus a ligation can be generated between those two probes by Taq DNA Ligase in the presence of mutant target. If there is an allele mismatch, the ligation does not take place. The ligation products are then captured onto streptavidin-coated paramagnetic beads, and detected by measuring the ECL signal of the TBR label. Results showed that the new method held a low detection limit down to 10 fmol and was successfully applied in the identification of point mutations from ASTC-α-1 cell line, PANC-1 cell line and blood cell in codon 273 of TP53 oncogene. In summary, this method provides a sensitive, cost-effective and easy operation approach for point mutation detection.

Photoinduced electron transfer in ruthenium(ii) trisbipyridine complexes connected to a naphthalenebisimidevia an oligo(phenyleneethynylene) spacer

The preparation and the characterization of three new dyads composed of a ruthenium trisbipyridine complex linked to a naphthalene bisimide electron acceptor via a phenyleneethynylene spacer of different length (one or two units) are reported. The dyads also differ by the anchoring position of the spacer on the bipyridine, which is appended either at the 4-position or the 5-position. Cyclic voltammetry and the UV-Vis absorption spectroscopy suggested that the spacer linked at the 5-position ensures a longer π-conjugation length but the electron transfer rates indicate a lower electronic coupling, than in 4-position. Photoinduced emission yields indicate a significant quenching of the MLCT excited-state of the ruthenium complex in these dyads. Except for the dyad linked in 5 position with one phenyleneethynylene unit, the transient absorption spectroscopy of all the other dyads evidences that the MLCT excited-state decays almost exclusively by electron transfer to form the charge-separated state RuIII–NBI−. This state could not be observed, presumably because the subsequent recombination to the ground state was much faster than its formation. In the dyad linked in 5 position with only one phenyleneethynylene unit, at room temperature, the 3MLCT* state is in equilibrium with the 3NBI* state, and it also decays via electron transfer. The notable feature of these dyads is first the occurrence of a relatively long-range electron transfer reaction via a bis(phenylethynylene) linking unit anchored at the 5 position. Secondly, we show within these series of compounds that subtle variations in the structure of the dyads (length of the spacer and anchoring position on bipy) have a strong impact on the rates and in the mechanism of decay of the 3MLCT* state. The photophysical properties of the dyads can be explained in terms of energy proximity of different excited states and magnitude of the electronic coupling according to the anchoring position.

XPS study of ruthenium tris-bipyridine electrografted from diazonium salt derivative on microcrystalline boron doped diamond

Boron doped diamond (BDD) functionalization has received an increasing interest during the last few years. Such an infatuation comes from the original properties of BDD, including chemical stability or an electrochemical window, that opens the way for the design of (bio)sensors or smart interfaces. In such a context, diazonium salts appear to be well suited for BDD functionalization as they enable covalent immobilization of functional entities such as enzymes or DNA. In this study we report microcrystalline BDD functionalization with a metallic complex, ruthenium tris(bipyridine), using the p-(tris(bipyridine)Ru(2+))phenyl diazonium salt. Electrografting using cyclic voltammetry (CV) allowed the formation of a ruthenium complex film that was finely characterized using electrochemistry and X-ray photoelectron spectroscopy (XPS). Moreover, we showed that chronopotentiometry (CP) is a convenient tool to monitor Ru complex film deposition through the control of the electrochemical pulse parameters (i.e. current density and pulse duration). Finally, such a control was demonstrated through the correlation between electrochemical and XPS characterizations.

Enhanced emission from fcc fluorescent photonic crystals

We fabricated a high quality fcc photonic crystal composed of ruthenium tris-bipyridine ${[\text{Ru}{(\text{bpy})}_{3}]}^{2+}{({\text{PF}}_{6}^{\ensuremath{-}})}_{2}$. Solid-angle-resolved spectroscopy was performed over 76% of $2\ensuremath{\pi}$ sr, with $\ensuremath{\sim}2\ifmmode^\circ\else\textdegree\fi{}$ resolution. Anisotropic emission patterns are explained with an analytic model of two plane waves coupled by diffraction from a Bragg plane. Two distinct types of emissive enhancements are observed, one due to modes coupling confined directions into leaky directions and the other due to maxima in the optical mode density adjacent to partial photonic band gaps.

Preparation, characterization and electrochemistry of an iron-only hydrogenase active site model covalently linked to a ruthenium tris(bipyridine) photosensitizer

An NH2-functionlized [Fe2S2] model complex of the iron-only hydrogenase active site was covalently linked to the tris(bipyridine)ruthenium photosensitizer. The [RuFeFe] trinuclear complex 1 was characterized by MS, IR, UV-vis, 1H & 13C NMR spectra. A quasi-reversible reduction peak at −1.41 V versus Ag/Ag+ for the FeIFeI/FeIFe0 process is observed in the cyclic voltammogram of 1.

Synthesis and photophysical properties of poly-(phenylenevinylene) dendrimers with a ruthenium tris-bipyridine core

The photophysical processes have been investigated in first, second and third generation dendrimers with poly-(phenylenevinylene) branches and a ruthenium tris-bipyridine core, RuD n ( n = 1–3). These dendrimers show very efficient forward singlet–singlet energy transfer from the branches to the ruthenium core upon UV irradiation, with efficiencies of 0.99 for RuD1 and 0.88 for RuD2 and RuD3 in CH 2Cl 2. The RuD n dendrimers show a bi-exponential emission decay in CH 2Cl 2, when excited with a 460 nm light with short lifetimes, however, the emission decay lifetimes become mono-exponential in 10% Triton X-100 aqueous solution ( τ = 840 ns for RuD1, 890 ns for RuD2 and 1120 ns for RuD3).

Physical, photophysical and structural properties of ruthenium(ii) complexes containing a tetradentate bipyridine ligand

The focus of this report is the synthesis and properties of two new analogues of ruthenium(ii) tris-bipyridine, a monomer and dimer. The complexes contain the ligand 6,6'-(ethan-1,2-diyl)bis-2,2'-bipyridine (O-bpy) which contains two bipyridine units bridged in the 6,6' positions by an ethylene bridge. Crystal structures of the two complexes formulated as [Ru(bpy)(O-bpy)](PF6)2 and [(Ru(bpy)2)2(O-bpy)](PF6)4 reveal structures of lower symmetry than D3 which affects the electronic properties of the complexes as substantiated by density functional theory (DFT) and time dependent density functional theory (TDDFT) calculations. The HOMO lies largely on the ruthenium center; the LUMO spreads its electron density over the bipyridine units, but not equally in the mixed O-bpy-bpy complexes. Calculated Vis/UV spectra using TDDFT methods agree with experimental spectra. The lowest lying triplet excited state for [Ru(bpy)(O-bpy)](PF6)2 is 3MC resulting in a low emission quantum yield and a large chloride ion photosubstitution quantum yield.

Electrochemical and Photophysical Properties of Ruthenium(II) Bipyridyl Complexes with Pendant Alkanethiol Chains in Solution and Anchored to Metal Surfaces

Luminescent ruthenium trisbipyridine complexes containing one or two mercapto-alkyl chain(s) on one of the bipyridyl units have been synthesized through a new strategy. The electrochemical and photophysical properties, determined in solution and in the solid state were compared. Deposition on electrode surfaces (gold, platinum and indium tin oxide) was realized by self-assembly and the re- sulting adsorbed layers were characterized by electrochemistry and fluorescence confocal microscopy. Voltammetric measurements of the films, in aqueous and in acetonitrile solution, allowed the determination of the surface coverages and the oxidation potentials of the complexes. The effect of the number of chains and the chain length in the complexes is highlighted. Emission of the adsorbed complexes was strongly quenched by the metallic surfaces, while confocal microscopy images showed aggregate formation on am length scale. The latter results provide considerable insight into the nature of the adsorbed layers and support deductions from the voltammetric data.

Oligothiophene-2-yl-vinyl bridged mono- and binuclear ruthenium(II) tris-bipyridine complexes: Synthesis, photophysics, electrochemistry and electrogenerated chemiluminescence

A series of mono- and binuclear ruthenium(II) tris-bipyridine complexes tethered to oligothienylenevinylenes have been synthesized and characterized by 1H NMR, 13C NMR and TOF-MS spectrometry. Photophysics, electrochemistry and electrogenerated chemiluminescence (ECL) properties of these complexes are investigated. The electronic absorption spectra of the mononuclear ruthenium complexes show a significant red shift both at MLCT (metal-to-ligand charge transfer) and π–π ∗ transitions of oligothienylenevinylenes with increase in the number of thiophenyl-2-yl-vinyl unit. For the binuclear complexes these two absorption bands are overlapped. All the metal complexes have very weak emission compared to that of the reference complex Ru(bpy) 2+ 3. The first reduction potentials of all mononuclear ruthenium complexes are less negative than that of Ru(bpy) 2+ 3, due to the moderate electron-withdrawing effect of oligothienylenevinylenes. For binuclear ruthenium complexes, only one Ru(II/III) oxidation peak ( E 1/2 = 0.96 V vs. Ag/Ag +) was observed, suggesting a weak interaction between two metal centers. Three successive reduction processes of bipyridine ligands are similar among all ruthenium complexes except for RuTRu, which has a very sharp peak owing to the accumulation of neutral product on the electrode surface. All these ruthenium complexes exhibited different ECL property in CH 3CN solution without any additional reductant or oxidant. For three mononuclear ruthenium complexes, the ECL intensity strengthens with increase in the number of thiophene-2-yl-vinyl unit. However, the ECL efficiency dramatically decreased in the binuclear ruthenium complexes. The ECL efficiencies of all the reported complexes do not exceed that of Ru(bpy) 2+ 3, where the ECL efficiency decreases in the order of RuTRu > Ru3T > Ru2T > RuT > Ru2TRu ( RuT,bis-2,2′-bipyridyl-(4-methyl-4′-(2-thienylethenyl)-2,2′-bipyridine) ruthenium dihexafluorophosphate; Ru2T, bis-2,2′-bipyridyl-(4-methyl-4′-{( E)-2-[5-(( E)-2-thienylethenyl)-thienylethenyl]}-2,2′-bipyridine) ruthenium dihexafluorophosphate; Ru3T, bis-2,2′-bipyridyl-(4-methyl-4′-{( E)-2-{( E)-2-[5-(( E)-2-thienylethenyl)-thienylethenyl]}}-2,2′-bipyridine) ruthenium dihexafluorophosphate; RuTRu, bis-2,2′-bipyridyl-ruthenium-bis-[2-(( E)-4′-methyl-2, 2′-bipyridinyl-4)-ethenyl]-thienyl-bis-2,2′-bipyridyl-ruthenium tetrahexafluorophosphate; Ru2TRu, bis-2,2′-bipyridyl-ruthenium-( E)-1,2-bis-{2-[2-(( E)-4′-methyl-2,2′-bipyridinyl-4)-ethenyl]-thienyl}-ethenyl-bis-2,2′-bipyridyl-ruthenium tetrahexafluorophosphate).

Photocurrent Generation in Layer-By-Layer Assembled Dendrimers with Ruthenium Tris-bipyridine Peripheral Groups and a Viologen-like Core

The photophysical and photoelectrochemical properties of first- and second-generation dendrimers with ruthenium tris-bipyridine peripheral groups and a tri-viologen like core (Ru3V3 and Ru6V3) were investigated in solution and when embedded within assembled films. The stepwise assembly of these dendrimers on quartz and ITO surfaces utilizing the layer-by-layer approach was investigated. The amount of the assembled dendrimers was found to increase on going to the higher generation dendrimer. This dendrimer generation effect was evident from the UV-vis, atomic force microscopy, and electrochemical measurements of the dendrimers in either solution phase or when embedded in films. The anodic and cathodic photocurrent generation was seen upon visible light irradiation, with higher photocurrents for Ru6V3 than Ru3V3. This observation was attributed to better light-harvesting properties, thicker films, and slower charge recombination processes in Ru6V3 when compared to Ru3V3.

Synthesis, electrochemical, and photophysical studies of multicomponent systems based on porphyrin and ruthenium(II) polypyridine complexes

Two ruthenium tris-bipyridine functionalized porphyrins 4, 8 and their Zn derivatives 4– Zn, 8– Zn were designed, synthesized, and characterized. The redox potentials of these complexes as well as their corresponding monomeric reference porphyrin and ruthenium bipyridine complexes were also measured for comparison. Primary dynamic studies on the electron injection and backing recombination between these complexes and TiO 2 nanoparticles were carried out by means of transient absorption spectroscopy. The results indicate that a long-lived charge separation state was obtained in these assemblies.

Photochemical Hydrogen Evolution in K4Nb6O17Semiconductor Particles Sensitized by Phosphonated Trisbipyridine Ruthenium Complexes

Three different phosphonated trisbipyridine ruthenium complexes, [(4-CH3-4'-CH2PO(OH)2-2,2'-bipyridine)(bpy)2Ru]·(PF6)2 (Ru-P1), [(4-CH3-4'-CH2PO(OH)2-2,2'-bipyridine)3Ru]·(PF6)2 (Ru-P2), and [(4,4'-CH2PO(OH)2-2,2'-bipyridine)3Ru]·(PF6)2 (Ru-P3) were synthesized and their photochemical and electrochemical properties were studied. These ruthenium complexes were strongly adsorbed on the surface of the layered metal oxide semiconductor K4Nb6O17 that was partially acid-exchanged and sensitized up to pH 10, while the carboxylated ruthenium complex, (4,4'-COOH-2,2'-bipyridine)3Ru·Cl2 (Ru-C) that was previously studied was sensitized only below pH 4. The visible light water reduction at K4Nb6O17 that was internally platinized and sensitized by these phosphonated Ru-complexes was comparatively studied using a reversible electron donor iodide.

Cyclic Voltammetry in a Perfluorocarbon Emulsion Blood Substitute

AbstractCyclic voltammetry in a perfluorocarbon emulsion based blood substitute (PEBS) was evaluated. The intent was to determine how PEBS affects the voltammetry of four representative electroactive compounds: potassium ferricyanide, ruthenium(II) trisbipyridine (rutris), hydroquinone, and 2,6‐dichloroindophenol (DCIP). Voltammograms in 0–20% PEBS‐Tris buffer mixtures are affected by PEBS, but reasonably well‐defined voltammograms are obtained in as much as 20% v/v. This report also shows that PEBS has only a small effect on amperometric detection of the reaction between DCIP and nicotinamide adenine dinucleotide (NADH), which has importance in clinical homogeneous immunoassays. Results support continued exploration of voltammetry/amperometry for quantitative analysis in this medium.

Ruthenium(II) Trisbipyridine Functionalized Gold Nanorods. Morphological Changes and Excited-State Interactions

Gold nanorods synthesized using cetyltrimethylammonium bromide and tetraoctylammonium bromide as stabilizers are functionalized with a thiol derivative of ruthenium(II) trisbipyridyl complex [(Ru(bpy)3(2+)-C5-SH] in dodecanethiol using a place-exchange reaction. The changes in the plasmon absorption bands and transmission electron micrographs indicate significant changes in the gold rod morphology during the place-exchange reaction. The (Ru(bpy)(3)2+-C5-SH in its excited state undergoes quick deactivation when bound to gold nanorods. More than 60% of the emission was quenched when [(Ru(bpy)3(2+)-C5-SH] was bound to gold nanorods. Emission decay analysis indicates that the energy transfer rate constant is greater than 10(10) s(-1).

Construction of an inexpensive surface plasmon resonance instrument for use in teaching and research

The construction of an inexpensive SPR instrument that can be used for both teaching and research is described. Using a 2′ × 2′ optical table to construct this instrument allows both scientists and students full access to the operation of the spectrometer. Furthermore, the use of open platform instrumentation has the advantage of maintaining the focus on the relationship between emerging technology and analytical chemistry as well as allowing the user to modify the instrument to enhance the measurement process for a particular application. This is a change from the learning paradigm used in most research and teaching laboratories where commercial instrumentation is treated as a black box due to its complexity. Three studies, which were performed using this instrument, are presented to demonstrate the suitability of this instrument for both teaching and research. These studies include measuring the refractive index of alcohols, investigating the partitioning of ruthenium (II) trisbipyridine chloride into Nafion, and understanding the mechanism controlling metal ion adsorption by polyacrylamide hydrogels.