Tropical Rainforest Tree Species Research Articles

Thigmomorphogenesis versus light in biomechanical growth strategies of saplings of two tropical rain forest tree species

• In the dense tropical rainforest understorey, saplings exhibit different growth strategies aiming at reaching light levels better fitting their ecology. Investing mainly in height growth, at the expense of their width, a lot are close to mechanical instability. Tachigali melinonii, a long living heliophilic tree species, is frequently observed to be extremely slender and supported by neighbours. Such observations suggest an active growth control through the perception of mechanical environment. • Mechanical environment or light availability, which one is the most influent on growth and slenderness (H/D)? To test this question, we recorded growth of control and staked saplings of two species with contrasting habits and ecology: T. melinonii, and Dicorynia guianensis, along a natural light gradient. • Dicorynia, the more stable, responded more clearly to the staking treatment, showing slenderness increase when light is available, whereas for Tachigali, only light availability governed growth. • For Tachigali, growth allocation is mainly governed by light availability and ontogeny, whereas Dicorynia is probably similar to the average tree strategy, using the thigmomorphogenetic physiological process to control its stability.

Similar irradiance-elicited plasticity of leaf traits in saplings of 12 tropical rainforest tree species with highly different leaf masstoarea ratio

Leaf traits of tropical tree species display an important inter-specific diversity, as detected for instance in the large range of values of leaf mass : area ratio (LMA). They also demonstrate a large irradiance-elicited plasticity, but there is still debate whether this plasticity differs among species. To address this question, leaf traits were recorded on saplings from 12 rainforest tree species in French Guiana, grown under approximately 5, 10 and 20% relative irradiance. Fifteen structural and physiological leaf traits related to photosynthesis were measured. The irradiance-elicited plasticity was quantified using a relative distance plasticity index. A large inter-specific diversity was detected for all leaf traits. A principal component analysis opposed species with a large mass-based photosynthesis, respiration, N content and photosynthetic nitrogen use efficiency, to species with a large leaf mass : area ratio, LMA. The two pioneer species used in this study displayed the largest photosynthetic capacity (and lowest LMA) and ranked at one end of the species continuum. Relative irradiance affected almost all traits with the exception of mass-based photosynthesis. A weak interaction was found between species and relative irradiance and the species ranking was maintained among relative irradiance treatments for the majority of the traits. A principal component analysis of the values of relative-distance plasticity index failed to reveal any consistent patterns of traits or species. We concluded that irradiance-elicited plasticity of leaf traits was similar among species irrespective of LMA and successional status, despite the occurrence of a large inter-specific diversity for the investigated traits.

Bird Assemblage and Visitation Pattern at Fruiting Elmerrillia tsiampaca (Magnoliaceae) Trees in Papua New Guinea

Most tropical trees produce fleshy fruits that attract frugivores that disperse their seeds. Early demography and distribution for these tree species depend on the effects of frugivores and their behavior. Anthropogenic changes that affect frugivore communities could ultimately result in changes in tree distribution and population demography. We studied the frugivore assemblage at 38 fruiting Elmerrillia tsiampaca, a rain forest canopy tree species in Papua New Guinea. Elmerrillia tsiampaca is an important resource for frugivorous birds at our study site because it produces abundant lipid-rich fruits at a time of low fruit availability. We classified avian frugivores into functional disperser groups and quantified visitation rates and behavior at trees during 56 canopy and 35 ground observation periods. We tested predictions derived from other studies of plant–frugivore interactions with this little-studied frugivore assemblage in an undisturbed rain forest. Elmerrillia tsiampaca fruits were consumed by 26 bird species, but most seeds were removed by eight species. The most important visitors (Columbidae, Paradisaeidae and Rhyticeros plicatus) were of a larger size than predicted based on diaspore size. Columbidae efficiently exploited the structurally protected fruit, which was inconsistent with other studies in New Guinea where structurally protected fruits were predominantly consumed by Paradisaeidae. Birds vulnerable to predation foraged for short time periods, consistent with the hypothesis that predator avoidance enhances seed dispersal. We identified seven functional disperser groups, indicating there is little redundancy in disperser groups among the regular and frequent visitors to this tropical rain forest tree species.

Population structure and regeneration of multiple-use tree species in a semi-deciduous African tropical rainforest: Implications for primate conservation

The conservation of threatened frugivorous primates (e.g. chimpanzees) and birds in the Albertine Rift Ecoregion rainforests requires the conservation of food tree species aided by an understanding of their natural regeneration and population trends. However, little is known of the population structure and regeneration patterns of a wide range of multiple-use tree species in many of these forests.We examined the population structures and regeneration patterns of 15 tree species (including pioneer, non-pioneer and shade-bearers) that are both timber and primate food sources in Budongo Forest Reserve, NW Uganda, by constructing species population size-class distributions (SCDs), and calculating SCD slopes, seedling:juvenile and juvenile:adult ratios. The SCD slopes were used as indicators of population structure, while the slope values were used to summarise, in a single number, the shape of the SCD for a species.Species composition between forest communities varied significantly, suggesting the influence of spatial environmental variations. Nine species had significant positive correlations between seedling and adult densities. Nine species, namely Lasiodiscus mildbraedii, Celtis mildbraedii, Pouteria altissima, Chrysophyllum albidum, Cynometra alexandri, Diospyros abyssinica, Funtumia elastica, Chrysophyllum perpulchrum and Antiaris toxicaria had highly negative SCD slopes spanning −2.47 to −1.1, and juvenile:adult ratios spanning from 5.34 to 1.62. Hence, clearly exhibiting ‘inverse J’ type curves, and suggesting a successful or healthy regeneration pattern. In contrast, both Alstonia boonei and Cordia millenii had weakly negative SCD slopes of −0.25, and juvenile:adult ratios <1; hence a pulsed or discontinuous regeneration pattern and low recruitment. The SCD slopes and juvenile:adult ratios varied between forest communities and historical management practices (HMPs). Most species recruit successfully and continuously over time, and hence have a more stable population structure. However, a discontinuous regeneration pattern for some, reflects unsustainable harvesting, that potentially eliminates seed sources for future generations. Hence, management of the Budongo Forest Reserve requires plans/practices that will enhance and facilitate the recruitment of both the vigorously and poorly regenerating species to ensure sustainable forest development. Preserving some fruiting trees in logged areas will benefit both long-term sustainable timber production and wildlife conservation, by providing food for frugivorous animals that will disperse the seeds.

The influence of environment and life‐history traits on the distribution of genes and individuals: a comparative study of 11 rainforest trees

This study investigates patterns of genetic connectivity among 11 co-distributed tropical rainforest tree species from the genus Elaeocarpus across a biogeographic barrier, the Black Mountain Corridor (BMC) in the Australian Wet Tropics (AWT). We analysed a combination of allelic and flanking region sequence data from microsatellite markers, and evaluated the relative influence of environmental preferences and functional traits on genetic diversity and gene flow. The results indicate that only in three species geographic structuring of haplotype distribution reflects a north vs. south of the BMC pattern. Environmental factors linked with altitude were recognized as affecting genetic trends, but the selective processes operating on upland species appear to be associated with competitiveness and regeneration opportunities on poor soil types rather than climate variables alone. In contrast to previous observations within southeastern Australian rainforests, genetic differentiation in the AWT appears to be associated with small-fruited rather than large-fruited species, highlighting how external factors can influence the dispersal dimension. Overall, this study emphasizes the importance of considering functional and environmental factors when attempting generalizations on landscape-level patterns of genetic variation. Understanding how plant functional groups respond to environmental and climatic heterogeneity can help us predict responses to future change.

Mycorrhizal Fungi Increased Early Growth of Tropical Tree Seedlings in Adverse Soil

The rate of reforestation has increased throughout the countries in Southeast Asia region during the last 20 years. At the same time, inconvenient situations such as forest destruction, forest exploitation, illegal logging, clear-cut forest areas, old agricultural lands, post-wildfire areas, conversion of natural forests into plantations, resettlement areas, mine lands, and amended adverse soils have also been increasing significantly. Mycorrhizas, hovewer, play important role to increase plant growth, enrich nutrient content and enhance survival rates of forest tree species in temperate and sub-tropical regions. Unfortunately, a little information so far is available regarding the effect of mycorrhizas on growth of tree species growing in tropical forests. In relevant, several experiments were carried out to determine whether ectomycorrhizal (ECM) fungi and arbuscular mycorrhizal (AM) fungi can enhance mycorrhizal colonization, nutrient content, and plant growth of some tropical rain forest tree species in Indonesia under nursery and field conditions. The families of tropical tree species used in the experiment were Thymelaeaceae ( Aquilari a crassna ), Leguminosae ( Sesbania grandifolia) , Guttiferae ( Ploiariu m alternifolium and Calophyllum hosei ), Apocynaceae ( Dyera polyphylla and Alstonia scholaris ), and Dipterocarpaceae ( Shore a belangeran ). These families are important as they provide timber and non-timber forest products (NTFPs). This paper discusses the role of mycorrhizal fungi in increasing early growth of tropical tree seedlings in adverse soil.

L’ontogenèse module-t-elle la plasticité des traits foliaires induite par la lumière dans des semis d’arbres de forêt tropicale humide? Un test avec Dicorynia guianensis et Tachigali melinonii (Fabaceae, Caesalpinioideae)

• Irradiance elicits a large plasticity in leaf traits, but little is known about the modulation of this plasticity by ontogeny. Interactive effects of relative irradiance and ontogeny were assessed on leaf traits for two tropical rainforest tree species: Dicorynia guianensis Amshoff and Tachigali melinonii (Harms) Barneby (Fabaceae, Caesalpinioideae). • Eleven morphological and physiological leaf traits, relative to photosynthetic performance, were measured on saplings at three different architectural development stages (ASD 1, 2 and 3) and used to derive composite traits like photosynthetic N-use efficiency. Measurements were made along a natural irradiance gradient. • The effect of ASD was very visible and differed between the two species. For Dicorynia guianensis, only leaf mass-per-area (LMA) significantly increased with ASDs whereas for Tachigali melinonii, almost all traits were affected by ASD: LMA, leaf N content and photosynthetic capacity increased from ASD 1t oASD 3. Photosynthetic N-use-efficiency was not affected by ASD in any species. • Leaf traits were severely modulated by irradiance, whereas the degree of plasticity was very similar among ASDs. Only few interactions were detected between irradiance and ASD, for leaf thickness, carbon content, and the ratio Chl/ Ni nT. melinonii and for photosynthetic capacity in D. guianensis. • We conclude that ontogenic development and irradiance-elicited plasticity modulated leaf traits, with almost no interaction, i.e., the degree of irradiance-elicited plasticity was stable across development stages and independent of ontogeny in these two species, at least in the early stages of development assessed here.

Wood density predicts plant damage and vegetative recovery rates caused by cyclone disturbance in tropical rainforest tree species of North Queensland, Australia

Abstract The ability to withstand disturbance (resistance) and the ability to recover biomass following disturbance (resilience) were investigated in Australian wet tropical rainforest tree species. These two attributes are expected to be negatively correlated, because investment of biomass in structural support (conferring resistance) results in trees exhibiting high wood densities and slow growth rates, and vice versa. We examined species’ responses to disturbance caused by a severe tropical cyclone to test this hypothesized trade‐off. We assessed cyclone damage in six species in three Mabi rainforest fragments on the Atherton Tablelands. Species differed in the proportion of individuals within four damage categories (minor damage, severe branch damage, snapped, uprooted). Resistance was positively related to wood density. We found a positive correlation between the proportion of trees experiencing minor damage only and wood density, supporting the hypothesized association between resistance and mechanical strength. Among the subset of trees in which stems snapped, rates of resprouting differed between species and were highest in low wood density species and lowest in species with highest wood density. Resilience, characterized as the ability to recover biomass following disturbance and estimated as growth rate standardized for stem diameter at breast height (g day−1 · mm−1), was negatively related to wood density. Thus, species with low wood densities were more likely to suffer stem and branch damage owing to cyclonic winds, but also demonstrated highest resprouting and fastest responses in terms of redeveloping biomass in the 8 months following disturbance. This suggests that a species’ position along the resistance–resilience spectrum can be predicted by mean wood density, which may allow managers to predict species’ responses to future cyclones. Our findings also provide mechanistic evidence for the ‘direct regeneration’ model of post‐cyclone succession, where response is characterized by resprouting and species composition is unchanged.

High variation in foliage and leaf litter chemistry among 45 tree species of a neotropical rainforest community

Distinct ecosystem level carbon : nitrogen : phosphorus (C : N : P) stoichiometries in forest foliage have been suggested to reflect ecosystem-scale selection for physiological strategies in plant nutrient use. Here, this hypothesis was explored in a nutrient-poor lowland rainforest in French Guiana. Variation in C, N and P concentrations was evaluated in leaf litter and foliage from neighbour trees of 45 different species, and the litter concentrations of major C fractions were also measured. Litter C ranged from 45.3 to 52.4%, litter N varied threefold (0.68-2.01%), and litter P varied seven-fold (0.009-0.062%) among species. Compared with foliage, mean litter N and P concentrations decreased by 30% and 65%, respectively. Accordingly, the range in mass-based N : P shifted from 14 to 55 in foliage to 26 to 105 in litter. Resorption proficiencies indicated maximum P withdrawal in most species, but with a substantial increase in variation in litter P compared with foliage. These data suggest that constrained ecosystem-level C : N : P ratios do not preclude the evolution of highly diversified strategies of nutrient use and conservation among tropical rainforest tree species. The resulting large variation in litter quality will influence stoichiometric constraints within the decomposer food web, with potentially far-ranging consequences on nutrient dynamics and plant-soil feedbacks.

Beneficial effect of spider presence on seedling recruitment of the tropical rainforest tree Dipteryx oleifera (Fabaceae)

This research presents evidence showing that: (1) lower arthropod herbivory correlates with seedling survival, and (2) spider presence correlates with lower arthropod herbivory, seedling growth, and seedling survival of the tropical rainforest tree species Dipteryx oleifera in eastern Nicaragua. The study was conducted from January 2005 to January 2006 in a 6.37 ha permanent plot established in 2002. Seedling height, spider behavior and presence on seedlings, and percentage of leaf area lost due to arthropod herbivory were measured. Arthropod herbivory was assessed from digital photographs of each seedling within the permanent plot. Seedling fate was followed in order to determine its correlation with spider presence, initial seedling size, and arthropod herbivory. A GLM showed that seedling survival correlated negatively with lower levels of arthropod herbivory (<20%), while seedlings with higher levels of herbivore damage experienced mortalities close to 100%. Results from another GLM suggests that seedling mean height (aprox. 8 cm) would be increased by approximately 1.5 cm for each year that spiders were present on seedlings and would be decreased 0.75 cm in height for each percent unit of arthropod herbivory. We also report a trend toward lower arthropod herbivory in seedlings colonized by spiders with aggressive traits, presumably because more aggressive spiders better defended seedlings against herbivorous arthropods than less aggressive spiders.

Physiological characteristics of tropical rain forest tree species: A basis for the development of silvicultural technology

The physiological characteristics of the dominant tree species in the tropical rain forest mainly belonging to dipterocarps as well as the environmental conditions especially for the light in the forest were studied to establish the silvicultural system for the forest regeneration in the tropical South Asia. The flowering patterns of the dipterocarp trees are usually irregular and unpredictable, which make difficult to collect sufficient seeds for raising the seedlings. The field survey revealed the diverged features of the so-called gregarious or simultaneous flowering of various species of this group. Appropriate conditions and methods for the storage of the seeds were established according to the detailed analyses of the morphological and physiological characteristics of the seeds such as the low temperature tolerance and the moisture contents. The intensity and spectra of the light in the forest primarily determine the growth and the morphological development of the seedlings under the canopy. Based on the measurements of the diffused light at the sites in the tropical forest in the varying sunlight, the parameters such as “the steady state of the diffuse light” and “the turning point” were defined, which were useful to evaluate the light conditions in the forest. To improve the survival of the transplanted seedlings, a planting method of “the bare-root seedlings”, the seedlings easy to be handled by removal of all leaves, soil and pots, was developed. Its marked efficiency was proved with various dipterocarps and other tropical trees by the field trial in the practical scale. Tolerance of the various species to the extreme environmental conditions such as fires, acid soils and drought were examined by the experiments and the field survey, which revealed marked adaptability of Shorea roxburghii as a potential species for regeneration of the tropical forests.

Ecological distribution of homobaric and heterobaric leaves in tree species of Malaysian lowland tropical rainforest

Tree species can generally be classified into two groups, heterobaric and homobaric leafed species, according to whether bundle-sheath extensions (BSEs) are found in the leaf (heterobaric leaf) or not (homobaric leaf). In this study, we study whether the leaf type is related to the growth environment and/or life form type, even in a tropical rain forest, where most trees have evergreen leaves that are generally homobaric. Accordingly, we investigated the distribution of leaf morphological differences across different life forms of 250 tree species in 45 families in a tropical rainforest. In total, 151 species (60%) in 36 families had homobaric leaves, and 99 species (40%) in 21 families had heterobaric leaves. We found that the proportion of heterobaric and homobaric leaf species differed clearly across taxonomic groups and life form types, which were divided into five life form types by their mature tree heights (understory, subcanopy, canopy, and emergent species) and as canopy gap species. Most understory (94%) and subcanopy (83%) species such as Annonaceae had homobaric leaves. In contrast, heterobaric leaf trees appeared more frequently in the canopy species (43%), the emergent species (96%) (such as Dipterocarpaceae), and the canopy gap species (62%). Our results suggest that tree species in the tropical rainforest adapt to spatial differences in the environmental conditions experienced at the mature height of each tree species, such as light intensity and vapor pressure difference, by having differing leaf types (heterobaric or homobaric) because these types potentially have different physiological and/or mechanical functions.

The successional status of tropical rainforest tree species is associated with differences in leaf carbon isotope discrimination and functional traits

We characterised the among species variability in leaf gas exchange and morphological traits under controlled conditions of seedlings of 22 tropical rainforest canopy species to understand the origin of the variability in leaf carbon isotope discrimination (Δ) among species with different growth and dynamic characteristics (successional gradient). Our results first suggest that these species pursue a consistent strategy in terms of Δ throughout their ontogeny (juveniles grown here versus canopy adult trees from the natural forest). Second, leaf Δ was negatively correlated with WUE and N, and positively correlated with gs, but among species differences in Δ were mainly explained by differences in WUE. Finally, species belonging to different successional groups display distinct leaf functional and morphological traits. We confirmed that fast growing early successional species maximise carbon assimilation with high stomatal conductance. In contrast, fast and slow growing late successional species are both characterised by low carbon assimilation values, but by distinct stomatal conductance and leaf morphological features. Along the successional gradient, these differences result in much lower Δ for the intermediate species (i.e. fast growing late successional) as compared to the two other groups.

Photoprotection, photosynthesis and growth of tropical tree seedlings under near-ambient and strongly reduced solar ultraviolet-B radiation

Seedlings of two late-successional tropical rainforest tree species, Tetragastris panamensis (Engler) O. Kuntze and Calophyllum longifolium (Willd.), were field grown for 3-4 months at an open site near Panama City (9 degrees N), Panama, under plastic films that either transmitted or excluded most solar UV-B radiation. Experiments were designed to test whether leaves developing under bright sunlight with strongly reduced UV-B are capable of acclimating to near-ambient UV-B conditions. Leaves of T. panamensis that developed under near-ambient UV-B contained higher amounts of UV-absorbing substances than leaves of seedlings grown under reduced UV-B. Photosynthetic pigment composition, content of alpha-tocopherol, CO(2) assimilation, potential photosystem II (PSII) efficiency (evaluated by F(v)/F(m) ratios) and growth of T. panamensis and C. longifolium did not differ between seedlings developed under near-ambient and reduced solar UV-B. When seedlings were transferred from the reduced UV-B treatment to the near-ambient UV-B treatment, a pronounced inhibition of photosynthetic capacity was observed initially in both species. UV-B-mediated inhibition of photosynthetic capacity nearly fully recovered within 1 week of the transfer in C. longifolium, whereas in T. panamensis an about 35% reduced capacity of CO(2) uptake was maintained. A marked increase in UV-absorbing substances was observed in foliage of transferred T. panamensis seedlings. Both species exhibited enhanced mid-day photoinhibition of PSII immediately after being transferred from the reduced UV-B to the near-ambient UV-B treatment. This effect was fully reversible within 1d in T. panamensis and within a few days in C. longifolium. The data show that leaves of these tropical tree seedlings, when developing in full-spectrum sunlight, are effectively protected against high solar UV-B radiation. In contrast, leaves developing under conditions of low UV-B lacked sufficient UV protection. They experienced a decline in photosynthetic competence when suddenly exposed to near-ambient UV-B levels, but exhibited pronounced acclimative responses.

A galloylated cyanogenic glycoside from the Australian endemic rainforest tree Elaeocarpus sericopetalus (Elaeocarpaceae)

A cyanogenic glycoside – 6′- O-galloylsambunigrin – has been isolated from the foliage of the Australian tropical rainforest tree species Elaeocarpus sericopetalus F. Muell. (Elaeocarpaceae). This is the first formal characterisation of a cyanogenic constituent in the Elaeocarpaceae family, and only the second in the order Malvales. 6′- O-galloylsambunigrin was identified as the principal glycoside, accounting for 91% of total cyanogen in a leaf methanol extract. Preliminary analyses indicated that the remaining cyanogen content may comprise small quantities of sambunigrin, as well as di- and tri-gallates of sambunigrin. E. sericopetalus was found to have foliar concentrations of cyanogenic glycosides among the highest reported for tree leaves, up to 5.2 mg CN g −1 dry wt.

ARCHITECTURE OF 54 MOIST-FOREST TREE SPECIES: TRAITS, TRADE-OFFS, AND FUNCTIONAL GROUPS

Tree architecture is an important determinant of the height extension, light capture, and mechanical stability of trees, and it allows species to exploit the vertical height gradient in the forest canopy and horizontal light gradients at the forest floor. Tropical tree species partition these gradients through variation in adult stature (Hmax) and light demand. In this study we compare 22 architectural traits for 54 Bolivian moist-forest tree species. We evaluate how architectural traits related to Hmax vary with tree size, and we present a conceptual scheme in which we combine the two axes into four different functional groups. Interspecific correlations between architecture and Hmax varied strongly from negative to positive, depending on the reference sizes used. Stem height was positively related to Hmax at larger reference diameters (14-80 cm). Species height vs. diameter curves often flattened toward their upper ends in association with reproductive maturity for species of all sizes. Thus, adult understory trees were typically shorter than similar-diameter juveniles of larger species. Crown area was negatively correlated with Hmax at small reference heights and positively correlated at larger reference heights (15-34 m). Wide crowns allow the small understory species to intercept light over a large area at the expense of a reduced height growth. Crown length was negatively correlated with Hmax at intermediate reference heights (4-14 m). A long crown enables small understory species to maximize light interception in a light-limited environment. Light-demanding species were characterized by orthotropic stems and branches, large leaves, and a monolayer leaf arrangement. They realized an efficient height growth through the formation of narrow and shallow crowns. Light demand turned out to be a much stronger predictor of tree architecture than Hmax, probably because of the relatively low, open, and semi-evergreen canopy at the research site. The existence of four functional groups (shade-tolerant, partial-shade-tolerant, and long- and short-lived pioneer) was confirmed by the principal component and discriminant analysis. Both light demand and Hmax capture the major variation in functional traits found among tropical rain forest tree species, and the two-way classification scheme provides a straightforward model to understand niche differentiation in tropical forests.

Cyanogenesis in the Australian tropical rainforest endemic Brombya platynema (Rutaceae): chemical characterisation and polymorphism.

This study examined two aspects of cyanogenesis in Brombya platynema F. Muell. (Rutaceae), a subcanopy tree endemic to tropical rainforest in far north Queensland, Australia. First, cyanogenic glycosides in foliage were fractionated and identified. The rare meta-hydroxylated cyanogenic glycoside, holocalin, was identified as the principal cyanogen, and traces of prunasin and amygdalin were detected. This is the first characterisation of cyanogenic constituents within the genus, and to the authors' knowledge, only the third within the Rutaceae, and the order Rutales. Second, variation in cyanogenic glycoside content within a population of B. platynema in lowland tropical rainforest was quantified. Both qualitative and quantitative polymorphism for cyanogenesis was identified. Interestingly, ~57% of individuals were considered acyanogenic, with concentrations of cyanogenic glycosides less than 8 μg CN g-1 DW. Among cyanogenic individuals there was substantial quantitative variation in cyanogenic glycoside concentration, which varied from 10.5 to 1285.9 μg CN g-1 DW. This high frequency of acyanogenic individuals is contrasted with the apparent absence of the acyanogenesis among populations of other tropical rainforest tree species. In the high herbivory environment of the tropical rainforest, this frequency of acyanogenesis among cyanogenic tropical tree taxa is unique.

Investigating the Use of Fractional Replication and Taguchi Techniques in Cryopreservation: A Case Study Using Orthodox Seeds of a Tropical Rainforest Tree Species

Cryopreservation is increasingly important for conserving endangered species including tropical rain forest germplasm where optimal cryopreservation protocols must be established rapidly sacrificing little germplasm. Currently, full factorial experiments analysed by ANOVA establish optimal conditions. However, these experiments can contain many treatment combinations whilst ANOVA identifies significant effects without guaranteeing to find robust optimal conditions. Taguchi optimization techniques efficiently identify robust conditions through fractional factorial experiments with an appropriate signal to noise ratio (SNR). This paper reports for the first time the use of Taguchi techniques in cryopreservation. An orthodox seed (Cassia siamea Lam.) was used to guarantee sufficient data to compare full and fractionally replicated experiments analysed using both ANOVA and SNR. For sprouting day (smaller is better), identical significant main effects were found for all experimental sizes for ANOVA and SNR. The 1/4 replicate did not allow investigation of interaction terms, but the significant main effects were the same for larger experiments. For shoot to root ratio (nominal is best), a significant main effect was found for all experimental sizes using ANOVA. This was also found using SNR, which identified additional significant main effect and interactions. No significant effects were found for dry weight (larger is better). We show smaller experiments are possible, provided important two level interactions are analysed. Differences determining the optimal treatment combination were found between ANOVA and SNR; with the Taguchi choice provides more robust solutions. Taguchi optimization techniques are recommended when germplasm is scarce and/or the experiment needs to be conducted rapidly.

Hyperspectral discrimination of tropical rain forest tree species at leaf to crown scales

We investigated the utility of high spectral and spatial resolution imagery for the automated species-level classification of individual tree crowns (ITCs) in a tropical rain forest (TRF). Laboratory spectrometer and airborne reflectance spectra (161 bands, 437–2434 nm) were acquired from seven species of emergent trees. Analyses focused on leaf-, pixel- and crown-scale spectra. We first described the spectral regions and factors that most influence spectral separability among species. Next, spectral-based species classification was performed using linear discriminant analysis (LDA), maximum likelihood (ML) and spectral angle mapper (SAM) classifiers applied to combinations of bands from a stepwise-selection procedure. Optimal regions of the spectrum for species discrimination varied with scale. However, near-infrared (700–1327 nm) bands were consistently important regions across all scales. Bands in the visible region (437–700 nm) and shortwave infrared (1994–2435 nm) were more important at pixel and crown scales. Overall classification accuracy decreased from leaf scales measured in the laboratory to pixel and crown scales measured from the airborne sensor. Leaf-scale classification using LDA and 40 bands had 100% overall accuracy. Pixel-scale spectra from sunlit regions of crowns were classified with 88% overall accuracy using a ML classifier and 60 bands. The highest crown-scale (ITC) accuracy was 92% with LDA and 30 bands. Producer's accuracies ranged from 70% to 100% and User's accuracies ranged from 81% to 100%. The SAM classifier performed poorly at all scales and spectral regions of analysis. ITCs were also classified using an object-based approach in which crown species labels were assigned according to the majority class of classified pixels within a crown. An overall accuracy of 86% was achieved with an object-based LDA classifier applied to 30 bands of data. Object-based and crown-scale ITC classifications were significantly more accurate with 10 narrow-bands relative to accuracies achieved with simulated multispectral, broadband data. We concluded that high spectral and spatial resolution imagery acquired over TRF canopy has substantial potential for automated ITC species discrimination.

Morphological plasticity of shade‐tolerant tropical rainforest tree seedlings exposed to light changes

Summary Previous studies on tropical rainforest seedlings have demonstrated low physiological plasticity in shade‐tolerant species in response to light, but little is known about the morphological plasticity of such species. We examined morphological traits in seedlings of 10 shade‐tolerant tropical rainforest tree species grown in four combinations of high and low light (10 and 0·8% full daylight, respectively). Plasticity of each trait was quantified using coefficients of variation. Plant traits varied in their plasticity, and could broadly be ranked as follows: stem form &gt; crown traits &gt; root form &gt; leaf form &gt; biomass allocation. Acclimation to an increase in light was generally greater than acclimation to a decrease in light, but crown traits showed significant changes in the high–low treatment. The ranking of species according to plasticity varied depending on the trait examined. Mean plasticity across all light treatments showed no relationship with either dry mass or relative growth rate of dry mass (RGRM) across species. However, plasticity in stem mass fraction (fraction of stem to total dry mass) was negatively correlated with low‐light RGRM across species. Principal components analysis indicated clustering of species depending on trait plasticity. These results suggest different strategies of light response among shade‐tolerant tropical tree seedlings.