Transform-ion Cyclotron Resonance Mass Spectrometry Research Articles

New piperazine and morpholine derivatives: Mass spectrometry characterization and evaluation of their antimicrobial activity

Recently, pharmaceutical research has been focused on the design of new antibacterial drugs with higher selectivity towards several strains. Major issues concern the possibility to obtain compounds with fewer side effects, at the same time effectively overcoming the problem of antimicrobial resistance. Several solutions include the synthesis of new pharmacophores starting from piperazine or morpholine core units. Mass spectrometry-based techniques offer important support for the structural characterization of newly synthesized compounds to design safer and more effective drugs for various medical conditions. Here, two new piperazine derivatives and four new morpholine derivatives were synthesized and structurally characterized through a combined approach of Fourier transform-ion cyclotron resonance (FT-ICR) and Linear Trap Quadrupole (LTQ) mass spectrometry. The support of both high-resolution and low-resolution mass spectrometric data namely accurate mass measurements, isotopic distribution and MSn spectra, was crucial to confirm the success of the synthesis. These compounds were further evaluated for inhibitory activity against a total of twenty-nine Gram-positive and Gram-negative bacteria to determine the action spectrum and the antimicrobial effectiveness. Results demonstrated compounds’ antimicrobial activity against many tested bacterial species, providing an inhibitory effect linked to different chemical structure and suggesting that the new-synthesized derivatives could be considered as promising antimicrobial agents.

The dissolved organic matter from the co-decomposition of Chinese milk vetch and rice straw induces the strengthening of Cd remediation by Fe-modified biochar

Fe-modified biochar (FB) and co-using Chinese milk vetch and rice straw (MR) are two effective ways for mitigating the cadmium (Cd) contamination in paddy fields in southern China. Nevertheless, the effects of FB combined with MR on Cd passivation mechanism remain unclear. In the current study, the strengthening effects of FB induced by MR were found and the mechanisms of the extracted dissolved organic matter (DOM) from the co-decomposition of MR on Cd alleviation were investigated through pot experiment and adsorption experiment. Pot experiment demonstrated that co-incorporating FB and MR decreased available Cd by 23.1% and increased iron plaque concentration by 11.8%, resulting in a 34.7% reduction in Cd concentrations in brown rice compared with addition of FB. Furthermore, co-using FB and MR improved available nutrients in the soil. The molecular characteristics of DOM derived from the decomposition of MR (DOM-MR) were analyzed by fluorescence excitation emission matrix spectroscopy-parallel factor analysis (EEM-PARAFAC) and Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR MS). Results showed that lignin/carboxylic-rich alicyclic molecules and protein/amino sugar were the main compounds, potentially involved in the Cd binding. Adsorption experiments revealed that the addition of DOM-MR improved the functional groups, specific surface area, and negative charges of FB, inducing the strengthening of both physisorption and chemisorption of Cd(II). The maximum adsorption capacity of Fe-modified biochar after adding DOM-MR was 634 mg g−1, 1.30 times that without the addition of DOM-MR. This study suggested that co-incorporating MR, and FB could serve as an innovative practice for simultaneous Cd remediation and soil fertilization in Cd-polluted paddy fields. It also provided valuable insights and basis that DOM-MR could optimize the performances of Fe-modified biochar and enhance its potential for Cd immobilization.Graphical

Molecular transformation of petroleum compounds by hydroxyl radicals produced upon oxidation of reduced nontronite

At redox interfaces, the interaction between oxygen and structural Fe(II) in minerals produces hydroxyl radicals (●OH); however, the specific reactivity and mechanisms of oxidation of complex petroleum compounds by ●OH remain poorly understood. This study investigates the interaction mechanisms between ●OH generated from reduced nontronite, an Fe-rich clay mineral (NAu-2), and petroleum compounds by employing a suite of wet chemistry, gas chromatography mass spectrometry and Fourier transform-ion cyclotron resonance-mass spectrometry, as well as theoretical calculations. The results showed that the intrinsic structure, composition, solubility, and adsorption of petroleum molecules onto reduced NAu-2 significantly influenced their reactivity with ●OH. Specifically, the aromatic fraction of a crude oil sample exerted a minimal influence on the oxidation rate of structural Fe(II) in reduced NAu-2, but enhanced the production of ●OH by generating environmentally persistent free radicals. ●OH reacted more with water-soluble dissolved organic matter from oil compared to polar compounds. The newly generated molecules by ●OH exhibited a preference for the insoluble (polar) phase. The oxidation of petroleum hydrocarbons by ●OH was mediated through hydrogen atom abstraction and radical adduct formation, followed by dehydrogenation, hydroxylation, and carboxylation reactions. Consequently, the abundance of oxygen-containing compounds in polar compounds increased. However, specific oxidation pathways differed depending on the nature of petroleum compounds. Our results provide insights that oxidation of petroleum compounds by ●OH is vital for mitigating the negative impacts from hydrocarbon contamination and for evaluating the role of these processes in the carbon cycle in redox-active environments.

Inhibitory effect of microplastics derived organic matters on humification reaction of organics in sewage sludge under alkali-hydrothermal treatment

Alkali-hydrothermal treatment (AHT) of sewage sludge is often used to recover value-added dissolved organic matters (DOM) enriched with artificial humic acids (HA). Microplastics (MPs), as emerging contaminants in sewage sludge, can leach organic compounds (MP-DOM) during AHT, which potentially impact the characteristics of thermally treated sludge's DOM. This study employed spectroscopy and Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR-MS) to explore the impacts of MPs on DOM composition and transformation during AHT. The biological effects of DOM were also investigated by hydroponic experiments. The results showed that the leaching of MP-DOM led to a substantial increase in DOC content of DOM of thermally treated sludge. Conversely, the HA content significantly decreased in the presence of MPs, resulting in a decline of plant growth facilitation degree. FT-ICR-MS analysis revealed that the reduction in HA content was characterized by a notable decline in the abundance of O6–7 and N1–3O6–7 molecules. Reactomics results indicated that the leaching of MP-DOM inhibited the Maillard reaction but bolstered oxidation reactions. The inhibition of Maillard reaction, resulting in a decrease in crucial precursors (dicarbonyl compounds, ketoses, and deoxyglucosone), was responsible for the decrease of HA content. The primary mechanism responsible for inhibiting the Maillard reaction was the consumption of reactive amino reactants through two pathways. Firstly, the leaching of organic acids in MP-DOM caused decrease of sludge pH, leading to the protonation of amino groups. Secondly, the lipid-like compounds in MP-DOM underwent oxidation (-2H+O), producing fatty aldehydes that consumed the reactive amino reactants. These discoveries offer enhanced insights into the specific contribution of MPs to the composition, transformation, bioactivity of DOM during AHT process.

Molecular-level insights into the temperature-dependent formation dynamics and mechanism of water-soluble dissolved organic carbon derived from biomass pyrolysis smoke

Water soluble organic carbon (WSOC) derived from biomass pyrolytic smoke is deposited through atmospheric aerosols, negatively affecting aquatic ecological quality and safety. However, the temperature-dependent molecular diversity and dynamic formation of smoke-derived WSOC remain poorly understood in water. Herein, we explored the molecular-level formation mechanism of pyrolytic smoke-derived WSOC in water to explain the evolution, heterogeneous correlations, and sequential responses of molecules and functional groups to increasing pyrolysis temperature. Two-dimensional correlation spectroscopy was used to innovatively establish the characteristic correlations between spectroscopy and Fourier transform-ion cyclotron resonance mass spectrometry. Temperature-dependent formation of WSOC exhibited diversity in absorbance/fluorescent components, unique/common molecules, and their chemical parameters, showing the simultaneous formation and degradation reactions. The common WSOC molecules with lower and higher degrees of oxidation showed significant positive and negative correlations with the fluorescent components, respectively. The primary sequential response of WSOC molecules to increasing pyrolysis temperature (lignin-like molecules → unsaturated hydrocarbons, condensed aromatic molecules → lipid-like/aliphatic-/peptide-like molecules) corresponded to the temperature response of functional groups (carboxylic/alcoholic → polysaccharides → aromatics/amides/phenolic/aliphatic groups), demonstrating well synergistic relationships between them. These novel findings will contribute to the comprehensive understanding and assessments of potential environmental behavior or risks of WSOC in aquatic ecosystems.

Emerging investigator series: impacts of land use on dissolved organic matter quality in agricultural watersheds: a molecular perspective.

In aquatic systems, dissolved organic matter (DOM) has important ecological and biogeochemical functions, where the molecular composition of DOM has larger-scale implications for climate change and global carbon cycles. However, there is limited information about the relationships between landscape characteristics and human disturbance that influence the molecular composition of DOM changes in watersheds. In this study, we collected water samples from 22 sites across a gradient of topographically characterized agricultural land coverage and community infrastructure development in the Kawartha region in Ontario, Canada. We employed a combination of Fourier Transform Ion-Cyclotron Resonance Mass Spectrometry (FT-ICR-MS) and absorbance spectroscopy to investigate changes in the molecular composition of DOM with increasing agricultural and community development disturbance on the optical and molecular characteristics of DOM. We found that dissolved organic carbon (DOC) concentrations in disturbed (>75%) watersheds ranged from 3.67-32.8 mg L-1 and were significantly higher than in watersheds with more abundant forest coverage (3.78-9.13 mg L-1). In addition, watersheds with higher phosphorus concentrations had more negative nominal oxygenation state of carbon (NOSC) values, suggesting biologically processed DOM correlating with increased phosphorus levels in aquatic systems. To relate the molecular properties of DOM to landscape metrics, we used Spearman's correlation analysis to reveal that agriculturally impacted and community developments enhanced the molecular signature of unsaturated hydrocarbon. In addition, we identified 65 dissolved organic phosphorus (DOP) molecules that significantly increased in abundance with disturbance, likely due to microbial mineralization of existing DOM with the addition of phosphorus to form larger, biologically inaccessible molecules. The overall recalcitrance of the identified molecules can serve as molecular signatures when evaluating the level of disturbance of a watershed.

Characterization and surrogate formulation of heavy fuel oil

Residual fuel oils have recently garnered attention as promising feedstocks for gasification processes. However, their complex compositions pose challenges for accurate characterization and simulation. This study addresses this issue by formulating a surrogate molecule for heavy fuel oil (HFO) with minimal components, aiming to replicate the average molecular formula and functional groups distribution found in the original fuel. To overcome challenges associated with Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR MS) detection limits, a distillation process was employed, yielding two fractions: residual distillate (enriched in heavy complex components) and volatile distillate (enriched in light components). Both fractions undergo comprehensive characterization through nuclear magnetic resonance (NMR) spectroscopy, FT-ICR MS for the residual distillate and gas chromatography-mass spectrometry (GC–MS) for the volatile distillate.The study highlights the importance of estimating average molecular weight (AMW) using both fractions to avoid overestimation when relying solely on FT-ICR MS. The developed six-component surrogate, based on elemental analysis, average molecular parameters (AMPs), and AMW of each fraction, demonstrates accuracy in replicating some properties of the original HFO. The surrogate proves effective compared to quantitative structure-property relationship (QSPR) calculations and holds potential for simulating HFO in gasification processes. The molecular design of the surrogate incorporates 1H and 13C NMR data, ensuring similarity in AMPs, AMW, and molecular formula to the target HFO. This comprehensive approach enhances the understanding and application of surrogate molecules for simulating residual oils in gasification processes.

Low-temperature oxidation characteristics and reaction pathways of crude oil within tight shale during air injection

The investigation of low-temperature oxidation (LTO) of crude oil within tight shale holds significant importance due to its implications for subsequent oxidation reactions and enhanced oil recovery in the process of air injection. In this study, the tight shale sample underwent oxidation at various LTO temperatures, followed by an analysis of the resulting gas composition. Furthermore, the oxidized oil was separated from the tight shale and subjected to characterization using electron paramagnetic resonance, nuclear magnetic resonance, and negative ion electrospray Fourier transform-ion cyclotron resonance mass spectrometry techniques. The primary focus was on examining the distinct LTO reaction pathways observable across different temperature ranges. The findings demonstrated a correlation between LTO temperature and the concentration of free radicals, which predominantly resided on aromatic hydrocarbons, alkanes, and oxygen atoms. Additionally, the proton count of polycyclic aromatic hydrocarbons exhibited a continuous increase from 83 to 350 °C, suggesting intensified aromatization and condensation reactions involving aliphatic and aromatic compounds. With rising LTO temperature, the molecular structure of O2 compounds underwent significant transformations, characterized by increased condensation degree and a decrease in low carbon number molecular structures, while higher equivalent double bonds and carbon number molecular structures became more prevalent. The influence of cycle path 1 diminished at temperatures ranging from 83 to 150 °C and 250 to 350 °C, whereas the significance of cycle paths 2 and 3 increased, resulting in an overall escalation of the oxidation rate with temperature elevation. It was observed that the shale oil LTO process exhibited a negative temperature coefficient within the temperature range of 150-250 °C, emphasizing the criticality of overcoming the energy barrier in this region to achieve stable combustion. This comprehensive investigation provides valuable insights into the mechanisms underlying LTO in crude oil confined within tight shale.

Comparison of secondary organic aerosol (SOA)-associated molecular features at urban sites in China and Korea in winter and summer (2019)

Secondary organic aerosol (SOA) formation is important in the field of atmospheric science due to its impacts on public health and climate change. However, the molecular compositions or formation mechanisms of SOA have not been fully characterized in ambient atmospheres. In this study, ambient fine particle (PM2.5) samples were collected in two urban cities in Beijing, China and Gwangju, Korea during the winter and summer seasons, and the SOA-associated molecular features were characterized by using Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR MS). We found that the secondary organic carbon (SOC) during wintertime in Gwangju exhibit a more aliphatic nature, and those in Beijing have more aromatic structures like humic compounds. The contribution of CHOS to the total identified WSOC associated SOC was the most abundant at Beijing site (∼40%) compared to the Gwangju site (∼30%), and the proportion of CHON species in the WSOC associated SOC accounted for ∼30% in Beijing and 20–30% in Gwangju. Majority of SOC-derived CHOS species (∼99%) likely contained sulfate functional groups at both sites regardless of the sampling season. Organonitrates predominated in CHON species in summer compared to winter, but some fractions appeared to contain other potential nitrogen functional groups such as amide and nitrile (∼20%), suggesting the existence of other formation pathways of organic nitrogen, especially during winter. This work gave an observation insight into the molecular features of SOC at two different sites, and will deepen the understanding on the region-specific SOA formation mechanisms.

Characterization of polycyclic aromatic hydrocarbons (PAHs) in atmospheric particles (PM2.5) in the North China Plain using positive-ion atmospheric pressure photoionization (APPI) coupled with fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS)

Many aromatic compounds, including 16 types of U.S. EPA priority PAHs, exist in substituted or unsubstituted forms and have high toxicities. Aromatic compounds in aerosols collected in the North China Plain (NCP) were characterized by GC-MS and atmospheric pressure photoionization (APPI) Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR MS). The concentrations of the 16 types of PAHs in the collected samples ranged from 277.0 to 876.8 ng/m3, which were higher than those collected in other regions and countries. Previous studies reported that only 27 wt% of aromatic compounds could be eluted using the GC system and demonstrated that APPI FT-ICR MS is a useful method for identifying large-molecular aromatics. In this study, two samples collected from the NCP were successfully characterized by APPI FT-ICR MS. In the APPI + mode, 231 and 228 CH formulas (containing only C and H and having a double bond equivalent (DBE) of 4 or greater) were identified, accounting for 10% of the numerical fraction and more than 40% of the intensity fraction. The FT-ICR data revealed that condensed PAHs with 6–8 aromatic rings had relatively high abundances and that a series of PAH homologs (alkylated PAHs) with identical DBE values ranging from 4 to 30 were present. Furthermore, heteroatom groups were also identified as significant components of the aromatic fractions. The O1, O2, N1, NO2, and S1 class species with DBE values of 3–34 and carbon numbers of 11–42 were identified by APPI FT-ICR MS. The heteroatom PAHs had DBE values and carbon number distributions similar to regular PAHs. The aromatic fractions determined in this work provide useful data for future quantitative analyses of aromatic compounds with high toxicities and our findings will help improve the current understanding of PAH compositions in the northern China. However, further research is needed to determine the abundances and toxicities of various apparent or substituted PAHs outside of the 16 types identified by the U.S. EPA as priority PAH compounds, which have been extensively researched.

A Research Journey: Over a Decade of Denaturing and Native-MS Analyses of Hydrophobic and Membrane Proteins in Amgen Therapeutic Discovery.

Membrane proteins and associated complexes currently comprise the majority of therapeutic targets and remain among the most challenging classes of proteins for analytical characterization. Through long-term strategic collaborations forged between industrial and academic research groups, there has been tremendous progress in advancing membrane protein mass spectrometry (MS) analytical methods and their concomitant application to Amgen therapeutic project progression. Herein, I will describe a detailed and personal account of how electrospray ionization (ESI) native mass spectrometry (nMS), ion mobility-MS (IM-MS), reversed phase liquid chromatographic mass spectrometry (RPLC-MS), high-throughput solid phase extraction mass spectrometry, and matrix-assisted laser desorption ionization mass spectrometry methods were developed, optimized, and validated within Amgen Research, and importantly, how these analytical methods were applied for membrane and hydrophobic protein analyses and ultimately therapeutic project support and progression. Additionally, I will discuss all the highly important and productive collaborative efforts, both internal Amgen and external academic, which were key in generating the samples, methods, and associated data described herein. I will also describe some early and previously unpublished nano-ESI (nESI) native-MS data from Amgen Research and the highly productive University of California Los Angeles (UCLA) collaboration. I will also present previously unpublished examples of real-life Amgen biotherapeutic membrane protein projects that were supported by all the MS (and IM) analytical techniques described herein. I will start by describing the initial nESI nMS experiments performed at Amgen in 2011 on empty nanodisc molecules, using a quadrupole time-of-flight MS, and how these experiments progressed on to the 15 Tesla Fourier transform ion cyclotron resonance MS at UCLA. Then described are monomeric and multimeric membrane protein data acquired in both nESI nMS and tandem-MS modes, using multiple methods of ion activation, resulting in dramatic spectral simplification. Also described is how we investigated the far less established and less published subject, that is denaturing RPLC-MS analysis of membrane proteins, and how we developed a highly robust and reproducible RPLC-MS method capable of effective separation of membrane proteins differing in only the presence or absence of an N-terminal post translational modification. Also described is the evolution of the aforementioned RPLC-MS method into a high-throughput solid phase extraction MS method. Finally, I will give my opinion on key developments and how the area of nMS of membrane proteins needs to evolve to a state where it can be applied within the biopharmaceutical research environment for routine therapeutic project support.

Molecular insight into DOM fate using EEM-PARAFAC and FT-ICR MS and concomitant heavy metal behaviors in biologically treated landfill leachate during coagulation: Al speciation dependence

Various combined processes with pre-coagulation have been developed for biologically treated landfill leachate, but the microscopic-level processes occurring during coagulation remain largely unknown. Herein, dissolved organic matter (DOM) fate using fluorescence excitation emission matrix spectroscopy combined with parallel factor analysis and electrospray ionization coupled Fourier transform-ion cyclotron resonance mass spectrometry and concomitant heavy metal (HM) behaviors were explored at the molecular level. In addition, AlCl3 and two polyaluminum chloride (PACl) species (dominated by [AlO4Al12(OH)24(H2O)12]7+ and [(AlO4)2Al28(OH)56(H2O)26]18+, respectively) were used. The results show that all coagulants are efficient at removing DOM. PACl was found to be advantageous over AlCl3 in overcoming pH fluctuation, which is ascribed to the different dominant mechanisms, namely, entrapment and sweep flocculation for AlCl3 and charge neutralization for PACl. Consequently, PACl was more effective at removing humic substances, usually high-molecular-weight, oxygen-rich and unsaturated, than protein substances. For HM removal, PACl was likewise better and more stable, where As, Cu, Ni, Co and Hg were removed predominantly via adsorption, and Cr, Zn, Pb, Cd and Mn were removed via coprecipitation. Correlation analysis showed that humic substances tended to complex with HMs and be removed synergistically due to the ubiquitous occurrences of aromatic structures and oxygen-containing functional groups.

Mechanistic Insights into the Biodegradation of Carbon Dots by Fungal Laccase.

While carbon dots (CDs) have the potential to support the agricultural revolution, it remains obscure about their environmental fate and bioavailability by plants. Fungal laccase-mediated biotransformation of carbon nanomaterials has received little attention despite its known capacity to eliminate recalcitrant contaminants. Herein, we presented the initial investigation into the transformation of CDs by fungal laccase. The degradation rates of CDs were determined to be first-order in both substrate and enzyme. Computational docking studies showed that CDs preferentially bonded to the pocket of laccase on the basal plane rather than the edge through hydrogen bonds and hydrophobic interactions. Electrospray ionization-Fourier transform-ion cyclotron resonance mass spectrometry (ESI-FT-ICR MS) and other characterizations revealed that the phenolic/amino lignins and tannins portions in CDs are susceptible to laccase transformation, resulting in graphitic structure damage and smaller-sized fragments. By using the 13C stable isotope labeling technique, we quantified the uptake and translocation of 13C-CDs by mung bean plants. 13C-CDs (10 mg L-1) accumulated in the root, stem, and leaf were estimated to be 291, 239, and 152 μg g-1 at day 5. We also evidenced that laccase treatment alters the particle size and surface chemistry of CDs, which could facilitate the uptake of CDs by plants and reduce their nanotoxicity to plants.

New Insights into the Role of Natural Organic Matter in Fe-Cr Coprecipitation: Importance of Molecular Selectivity.

Coprecipitation of Fe/Cr hydroxides with natural organic matter (NOM) is an important pathway for Cr immobilization. However, the role of NOM in coprecipitation is still controversial due to its molecular heterogeneity and diversity. This study focused on the molecular selectivity of NOM toward Fe/Cr coprecipitates to uncover the fate of Cr via Fourier transform-ion cyclotron resonance-mass spectrometry (FT-ICR-MS). The results showed that the significant effects of Suwannee River NOM (SRNOM) on Cr immobilization and stability of the Fe/Cr coprecipitates did not merely depend on the adsorption of SRNOM on Fe/Cr hydroxides. FT-ICR-MS spectra suggested that two pathways of molecular selectivity of SRNOM in the coprecipitation affected Cr immobilization. Polycyclic aromatics and polyphenolic compounds in SRNOM preferentially adsorbed on the Fe/Cr hydroxide nanoparticles, which provided extra binding sites and promoted the aggregation. Notably, some specific compounds (i.e., polyphenolic compounds and highly unsaturated phenolic compounds), less unsaturated and more oxygenated than those adsorbed on Fe/Cr hydroxide nanoparticles, were preferentially incorporated into the insoluble Cr-organic complexes in the coprecipitates. Kendrick mass defect analysis revealed that the insoluble Cr-organic complexes contained fewer carbonylated homologous compounds. More importantly, the spatial distribution of insoluble Cr-organic complexes was strongly related to Cr immobilization and stability of the Fe/Cr-NOM coprecipitates. The molecular information of the Fe/Cr-NOM coprecipitates would be beneficial for a better understanding of the transport and fate of Cr and exploration of the related remediation strategy.

Evolution of lignin pyrolysis heavy components through the study of representative lignin monomers

Seven typical lignin monomers with different number of methoxyl groups and different 4-substituted patterns were pyrolyzed at 500 °C and 700 °C for 120 s to simulate the secondary polymerization and side chain conversion reactions of primary pyrolytic lignin monomers. The pyrolytic heavy oil components were identified at molecular scale with Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR-MS) and analyzed with Kendrick mass defect (KMD) and van Krevelen diagrams. The detected heavy components were typically phenolic oligomers formed dominantly through the radical coupling reactions of phenol radicals (C6H4O) and methoxyl radicals (OCH2). Model compounds with CC type 4-substituted groups were prone to produce more phenolic oligomers with more aromatic units. For the CO type model compounds, the number of methoxyl groups have significant influence on the generation of heavy components, thereby affecting the char yields. Rising temperature promotes the generation of heavy components through three main routes, namely the additions of CH2, OCH2 and C6H4O. These routes were mapped on van Krevelen diagrams, shedding light on the evolution patterns of both polymerization and side chain conversion reactions during the secondary pyrolysis of lignin.

Spatial and molecular variations in forest topsoil dissolved organic matter as revealed by FT-ICR mass spectrometry

Forest soils cover about 30 % of the Earth's land surface and play a fundamental role in the global cycle of organic matter. Dissolved organic matter (DOM), the largest active pool of terrestrial carbon, is essential for soil development, microbial metabolism and nutrient cycling. However, forest soil DOM is a highly complex mixture of tens of thousands of individual compounds, which is largely composed of organic matter from primary producers, residues from microbial process and the corresponding chemical reactions. Therefore, we need a detailed picture of molecular composition in forest soil, especially the pattern of large-scale spatial distribution, which can help us understand the role of DOM in the carbon cycle. To explore the spatial and molecular variations of DOM in forest soil, we choose six major forest reserves located in different latitudes ranging in China, which were investigated by Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR MS). Results show that aromatic-like molecules are preferentially enriched in DOM at high latitude forest soils, while aliphatic/peptide-like, carbohydrate-like, and unsaturated hydrocarbon molecules are preferentially enriched in DOM at low latitude forest soils, besides, lignin-like compounds account for the highest proportion in all forest soil DOM. High latitude forest soils have higher aromatic equivalents and aromatic indices than low latitude forest soils, which suggest that organic matter at higher latitude forest soils preferentially contain plant-derived ingredients and are refractory to degradation while microbially derived carbon is dominant in organic matter at low latitudes. Besides, we found that CHO and CHON compounds make up the majority in all forest soil samples. Finally, we visualized the complexity and diversity of soil organic matter molecules through network analysis. Our study provides a molecular-level understanding of forest soil organic matter at large scales, which may contribute to the conservation and utilization of forest resources.

Mist cannon trucks can exacerbate the formation of water-soluble organic aerosol and PM2.5 pollution in the road environment

Abstract. Mist cannon trucks have been widely applied in megacities in China to reduce the road dust, since they are considered to be more water saving and efficient than the traditional sprinkling trucks. However, their effect on the formation of water-soluble organic compounds and the pollution control of fine particles (PM2.5) remains unknown. We characterized the variations of chemical compositions in PM2.5 collected on the road sides during the simulated operations of mist cannon truck and traditional sprinkling truck via Fourier transform ion cyclotron resonance mass spectrometry and ion chromatography. The mass concentrations of water-soluble organic carbon in PM2.5 showed a significant increase (62 %–70 %) after air spraying. Furthermore, we found that water-soluble organic compounds, particularly organic nitrates, increased significantly via the interactions of reactive gas-phase organics, atmospheric oxidants and aerosol liquid water after air spraying, although the air spraying had a better effect on suppressing road dust than the ground aspersion. Moreover, the formation of PM2.5 on the road segment where the mist cannon truck passed by was promoted, with an increase of up to 13 % in mass concentration after 25–35 min, on average. Thus, the application of mist cannon trucks potentially worsens the road atmospheric environment through the increase in PM2.5 levels and the production of a large number of water-soluble organic compounds in PM2.5. The overall results provide not only valuable insights to the formation processes of water-soluble organic compounds associated with aerosol liquid water in the road environment but also management strategies to regulate the operation of mist cannon trucks in China.

Molecular-level insights into the heterogeneous variations and dynamic formation mechanism of leached dissolved organic matter during the photoaging of polystyrene microplastics

Microplastics (MPs) and their derivatives have received worldwide attention owing to their adverse effects on ecosystems. However, molecular diversity and dynamic formation of dissolved organic matter (DOM) during the photoaging of MPs remain unclear. Herein, we explored a molecular‒level formation mechanism for polystyrene MP (MPPS)‒derived DOM (PSDOM) during the photoaging of MPs to explain the evolution, heterogeneity, and sequential response of molecules to irradiation. Two‒dimensional correlation spectroscopy was applied to correlate the variations of PSDOM molecules detected by Fourier transform–ion cyclotron resonance mass spectrometry with those of MPPS functional groups detected by Fourier transform infrared spectroscopy. Irradiation‒induced PSDOM contained the most highly unsaturated structures with oxygen, but showed fewer aromatic structures than natural aquatic DOM. Photochemical transformations occurred between saturated‒reduced and oxidized molecules during PSDOM leaching, with the low‒oxidized and high‒oxidized molecules undergoing considerable changes in the normal carbon oxidation state and molecular number, respectively. The primary sequential response of PSDOM molecules to increasing irradiation time [low‒oxidized/high‒weight (450<m/z<800) → high‒oxidized → saturated/low‒weight molecules (m/z<450)] corresponded to the response of MPPS functional groups (aromatic C‒H → carbonyl → aromatic ring, CH2 bend → C‒H groups), demonstrating well synergistic relationships between them. These novel findings will contribute to the understanding of underappreciated behaviors or risks of MPDOM in aquatic ecosystems.

Temperature-Dependent Molecular Evolution of Biochar-Derived Dissolved Black Carbon and Its Interaction Mechanism with Polyvinyl Chloride Microplastics.

Biochar-derived dissolved black carbon (DBC) molecules are dependent on the BC formation temperature and affect the fate of emerging contaminants in waters, such as polyvinyl chloride microplastic (MPPVC). However, the temperature-dependent evolution and MPPVC-interaction of DBC molecules remain unclear. Herein, we propose a novel DBC-MPPVC interaction mechanism by systematically interpreting heterogeneous correlations, sequential responses, and synergistic relationships of thousands of molecules and their linking functional groups. Two-dimensional correlation spectroscopy was proposed to combine Fourier transform-ion cyclotron resonance mass spectrometry and spectroscopic datasets. Increased temperature caused diverse DBC molecules and fluorophores, accompanied by molecular transformation from saturation/reduction to unsaturation/oxidation with high carbon oxidation states, especially for molecules with acidic functional groups. The temperature response of DBC molecules detected via negative-/positive-ion electrospray ionization sequentially occurred in unsaturated hydrocarbons → lignin-like → condensed aromatic → lipid-/aliphatic-/peptide-like → tannin-like → carbohydrate-like molecules. DBC molecular changes induced by temperature and MPPVC interaction were closely coordinated, with lignin-like molecules contributing the most to the interaction. Functional groups in DBC molecules with m/z < 500 showed a sequential MPPVC-interaction response of phenol/aromatic ether C-O, alkene C═C/amide C═O → polysaccharides C-O → alcohol/ether/carbohydrate C-O groups. These findings help to elucidate the critical role of DBCs in MP environmental behaviors.

Dissolved organic matter transformation mechanisms and process optimization of wastewater sludge hydrothermal humification treatment for producing plant biostimulants

Understanding the composition, transformation and bioactivity of dissolved organic matter (DOM) at the molecular level is crucial for investigating the hydrothermal humification process of wastewater sludge and producing ecological fertilizers. In this study, DOM transformation pathways under alkali–thermal humification treatment (AHT) were characterized by Fourier transform–ion cyclotron resonance mass spectrometry (FT–ICR MS) in conjunction with molecular reaction network analysis. The effects of DOM on plant growth were examined using hydroponics and transcriptomic analysis. In the wastewater sludge humification process, AHT produced maximum amounts of protein (3260.56 mg/L) and humic acid (5788.24 mg/L) after 12 h. FT–ICR MS results indicated that protein-like structures were prone to continuous oxidation and were ultimately transformed into aromatic N-containing compounds resembling humic substances. Several reactive fragments (such as –C2H2O2, –C3H4O2, and –C4H6O2) formed by the Maillard reaction (MR) were identified as potential precursors to humic acid (HA). In terms of biological effects, DOM12h showed the highest rice germination and growth activity, whereas that produced by AHT for a longer period (> 12 h) displayed phytotoxicity owing to the accumulation of toxic substances. Plant biostimulants (such as amino acids and HAs) in DOM improved energy metabolism and carbohydrate storage in rice seedlings by upregulating the “starch and sucrose metabolism” pathways. Toxic substances (such as pyrrole, pyridine, and melanoidin) in DOM can activate cell walls formation to inhibit abiotic stimuli in rice seedlings through the biosynthesis of phenylpropanoid pathway. These findings provide a theoretical basis for optimizing sludge hydrothermal humification and recovering high-quality liquid fertilizers.