Amidst the escalating global concern over heavy metal discharge from industrial effluents, Mo(VI), as a potentially toxic trace element, poses significant risks to human and environmental health. Traditional treatment methods such as biodegradation and ion exchange have low removal efficiency, hence, the efficient removal of Mo (VI) ions from industrial wastewater assumes paramount importance. Emerging materials, Metal-Organic Frameworks (MOFs), have garnered extensive attention in water treatment due to their strong adsorption properties, and MOFs membrane materials are hailed as the most promising adsorbents. Therefore, this study aims to prepare a novel membrane material with high efficiency for the removal of Mo (VI) by loading MOFs into nanofibers. Given the water stability of MIL-101, MIL-101-R(-H, -NH2, -NO2) with different functional groups were prepared and subsequently loaded into PAN nanofibrous for the adsorption of Mo(VI). Adsorption kinetics and isotherm studies revealed PAN/MIL-101(Cr)-NH2 to exhibit superior adsorption performance, achieving a maximum adsorption capacity of 171.81 mg/g. Density functional theory (DFT) calculations and molecular dynamics simulations elucidated the adsorption mechanism, highlighting the role of amino modification in facilitating Mo(VI) adsorption through electrostatic attraction and high reactivity. This work not only offers novel materials and approaches for Mo(VI) wastewater treatment but also advances the industrial application of MOF materials in the domain of heavy metal wastewater treatment.