Top Sediment Layer Research Articles

Water Injection Dredging for improving and preserving reservoir storage capacity: modelling and measuring tools

Water Injection Dredging (WID) has been successfully applied for removing sediment deposits in reservoirs, which results in an increase of their storage capacity. This dredging method is based on the fluidization of the top sediment layer by pressurized injection of water by a dredging vessel. The fluidized sediment can be transported towards the dead storage of the reservoir or sluiced out of the reservoir through the bottom outlets of a dam. This flow can either occur by gravity induced flow or especially directed by the dredging strategy of the WID vessel. This dredging technique can increase the water storage capacity of the reservoir and prevent the erosion of the river downstream, hence the sediment blockage. Recent developments in modelling and measuring tools have enabled stakeholders to design, optimize and monitor WID in reservoirs. In this paper, we will demonstrate how modelling and measuring tools can be used to evaluate alternative dredging strategies for reservoir maintenance. In particular, we show how a mid-field and far-field modelling can be applied for designing WID actions and predicting sediment plume dynamics in a given reservoir. Additionally, we will present recently-developed in-situ measuring tools, that are currently used for monitoring turbidity in a water column and sediment properties during and after WID actions. Finally, potential benefit of applying WID in Shihmen Reservoir (Taiwan) is discussed.

Restoration experiments in polymetallic nodule areas.

Deep‐seabed polymetallic nodule mining can have multiple adverse effects on benthic communities, such as permanent loss of habitat by removal of nodules and habitat modification of sediments. One tool to manage biodiversity risks is the mitigation hierarchy, including avoidance, minimization of impacts, rehabilitation and/or restoration, and offset. We initiated long‐term restoration experiments at sites in polymetallic nodule exploration contract areas in the Clarion‐Clipperton Zone that were (i) cleared of nodules by a preprototype mining vehicle, (ii) disturbed by dredge or sledge, (iii) undisturbed, and (iv) naturally devoid of nodules. To accommodate for habitat loss, we deployed >2000 artificial ceramic nodules to study the possible effect of substrate provision on the recovery of biota and its impact on sediment biogeochemistry. Seventy‐five nodules were recovered after eight weeks and had not been colonized by any sessile epifauna. All other nodules will remain on the seafloor for several years before recovery. Furthermore, to account for habitat modification of the top sediment layer, sediment in an epibenthic sledge track was loosened by a metal rake to test the feasibility of sediment decompaction to facilitate soft‐sediment recovery. Analyses of granulometry and nutrients one month after sediment decompaction revealed that sand fractions are proportionally lower within the decompacted samples, whereas total organic carbon values are higher. Considering the slow natural recovery rates of deep‐sea communities, these experiments represent the beginning of a ~30‐year study during which we expect to gain insights into the nature and timing of the development of hard‐substrate communities and the influence of nodules on the recovery of disturbed sediment communities. Results will help us understand adverse long‐term effects of nodule removal, providing an evidence base for setting criteria for the definition of “serious harm” to the environment. Furthermore, accompanying research is needed to define a robust ecosystem baseline in order to effectively identify restoration success. Integr Environ Assess Manag 2022;18:682–696. © 2021 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals LLC on behalf of Society of Environmental Toxicology & Chemistry (SETAC).

Genomic and transcriptomic dissection of Theionarchaea in marine ecosystem.

Theionarchaea is a recently described archaeal class within the Euryarchaeota. While it is widely distributed in sediment ecosystems, little is known about its metabolic potential and ecological features. Here, we used metagenomics and metatranscriptomics to characterize 12 theionarchaeal metagenome-assembled genomes, which were further divided into two subgroups, from coastal mangrove sediments of China and seawater columns of the Yap Trench. Genomic analysis revealed that apart from the canonical sulfhydrogenase, Theionarchaea harbor genes encoding heliorhodopsin, group 4 [NiFe]-hydrogenase, and flagellin, in which genes for heliorhodopsin and group 4 [NiFe]-hydrogenase were transcribed in mangrove sediment. Further, the theionarchaeal substrate spectrum may be broader than previously reported as revealed by metagenomics and metatranscriptomics, and the potential carbon substrates include detrital proteins, hemicellulose, ethanol, and CO2. The genes for organic substrate metabolism (mainly detrital protein and amino acid metabolism genes) have relatively higher transcripts in the top sediment layers in mangrove wetlands. In addition, co-occurrence analysis suggested that the degradation of these organic compounds by Theionarchaea might be processed in syntrophy with fermenters (e.g., Chloroflexi) and methanogens. Collectively, these observations expand the current knowledge of the metabolic potential of Theionarchaea, and shed light on the metabolic strategies and roles of these archaea in the marine ecosystems.

Chronological Trends and Mercury Bioaccumulation in an Aquatic Semiarid Ecosystem under a Global Climate Change Scenario in the Northeastern Coast of Brazil.

Simple SummaryManaging aquatic systems is becoming increasingly complex due to human impacts, multiple and competing water needs and climate variability. Considering the Hg concentration present in the top layers of sediment (~20 cm around 30 to 40 years) with the outer layers in the tree cores tree rings cores and in the sediment’s cores from Pacoti estuary and the Ceará estuary, overall data indicate an increase in mercury in recent years. A positive and significant correlation (p < 0.05) was revealed between Hg trends in sediments and Hg trends in annular tree rings. This shared Hg pattern reflects local environmental conditions. The results of this work reinforce the indicators previously described in the semiarid NE region of Brazil, showing that global climate change and some anthropogenic factors are key drivers to Hg exposure and biomagnification for wildlife and humans. Possible climate-induced shifts in these aquatic systems highlight the need for accurate and regionally specific metrics of change in the past in response to climate and for improved understanding of response to climate factors. These processes are inducing a greater mobilization of bioavailable Hg, which could allow an acceleration of the biogeochemical transformation of Hg.Due to global warming, in the northeastern semiarid coastal regions of Brazil, regional and global drivers are responsible for decreasing continental runoff and increasing estuarine water residence time, which promotes a greater mobilization of bioavailable mercury (Hg) and allows increasing fluxes and/or bioavailability of this toxic trace element and an acceleration of biogeochemical transformation of Hg. In this work, an application of dendrochemistry analysis (annular tree rings analysis) was developed for the reconstruction of the historical pattern of mercury contamination in a contaminated area, quantifying chronological Hg contamination trends in a tropical semiarid ecosystem (Ceará River Estuary, northeastern coast of Brazil) through registration of mercury concentration on growth rings in specimens of Rhizophora mangle L. and using the assessment in sediments as a support for the comparison of profiles of contamination. The comparison with sediments from the same place lends credibility to this type of analysis, as well as the relationship to the historical profile of contamination in the region, when compared with local data about industries and ecological situation of sampling sites. In order to evaluate the consequences of the described increase in Hg bioavailability and bioaccumulation in aquatic biota, and to assess the biological significance of Hg concentrations in sediments to fish and wildlife, muscle and liver from a bioindicator fish species, S. testudineus, were also analyzed. The results of this work reinforce the indicators previously described in the semiarid NE region of Brazil, which showed that global climate change and some anthropogenic factors are key drivers of Hg exposure and biomagnification for wildlife and humans. Considering the Hg concentration present in the top layers of sediment (~20 cm around 15 to 20 years) with the outer layers in the tree ring cores and in the sediment’s cores from Pacoti estuary and the Ceará estuary, overall the data indicate an increase in mercury in recent years in the Hg surface sediments, especially associated with the fine sediment fraction, mainly due to the increased capacity of small particles to adsorb Hg. There was revealed a positive and significant correlation (p < 0.05) between Hg trends in sediments and Hg trends in annular tree rings. This shared Hg pattern reflects local environmental conditions. The Hg concentration values in S. testudineus from both study areas are not restrictive to human consumption, being below the legislated European limit for Hg in foodstuffs. The results from S. testudineus muscles analysis suggest a significant and linear increase in Hg burden with increasing fish length, indicating that the specimens are accumulating Hg as they grow. The results from both rivers show an increase in BSAF with fish growth. The [Hg] liver/[Hg] muscles ratio >1, which indicates that the S. testudineus from both study areas are experiencing an increase in Hg bioavailability. Possible climate-induced shifts in these aquatic systems processes are inducing a greater mobilization of bioavailable Hg, which could allow an acceleration of the biogeochemical transformation of Hg.

Wind exposure and sediment type determine the resilience and response of seagrass meadows to climate change

AbstractSeagrasses and bare sediment represent alternative stable states, with sediment resuspension being a key driver of system stability via the Seagrass–Sediment–Light (SSL) feedback. We explore the SSL feedback by quantifying the sediment stabilization by seagrass, and using these measurements to calculate under which conditions seagrass ends up in a turbid environment. We quantified in‐situ sediment resuspension velocity thresholds (ucr) for Zostera marina growing in medium to fine sand, using a field flume inducing near‐bed wave motion. ucr was determined for full length shoots, shoots clipped to 0.08 m, and removed shoots. We found that rhizomes did not influence ucr of the top sediment layer. Overall, ucr was linearly related to blade area, which became independent for sediment type when normalizing ucr for the resuspension threshold after shoot removal. Comparing measured ucr against natural wave conditions showed that the seagrass meadow at the study site is currently stable. Exploring the effects of changing hydrodynamic conditions revealed that effects of increasing storminess has limited influence on sediment resuspension and thus the SSL‐feedback. Increasing mean wind velocity had a stronger influence on SSL‐feedback dynamics by causing more frequent exceedance of ucr. The response of seagrasses to increasing wind pressure depends on bay topography. A fully exposed Z. marina meadow under low initial turbidity pressure trended toward bistability, as turbidity pressure increased mainly on bare sediments. The study site and a fully exposed Z. marina meadow under high initial turbidity pressure saw an increase in turbidity across all blade areas.

Трансформация форм нахождения радиоцезия в прудах ближней зоны АЭС Фукусима-1 и динамика его распределения в системе взвесь — вода

The paper is concerned with the results of 137Cs monitoring in the irrigation ponds of the Okuma town in the Fukushima Dai-ichi Nuclear Power Plant (FDNPP) exclusion zone. The 137Cs activity concentrations in the ponds appeared to be higher than those in the rivers and dam reservoirs in the region. The study has revealed a trend for a decline in 137Cs activity concentrations, both particulate and dissolved. The rate of particulate 137Cs decline was much higher than that of dissolved. The total distri- bution coefficient Kd (137Cs) in the suspended sediment-water system in the studied ponds was decreasing in time with the rate constant of 0.12-0.18 year-1. Assuming that the decrease in Kd is associated with decomposition of hot glassy particles, the time scale of 137Cs leaching from them in these water bodies was estimated to be 5-8 years. These estimates are consistent with the findings of recent laboratory experiments on the subject. With respect to seasonal variations, the highest levels of dissolved 137Cs in the studied ponds were observed from June to October as a function of specific pond and monitoring year. Based on data about 137Cs speciation in the bottom sediment top layer of the ponds and its distri- bution in the sediment-water system, the exchangeable radiocesium interception potential RIPex(K) for the ponds sediments was estimated to be 1650-2250 mg-eq/kg, which is within the range of values measured by laboratory studies.

Sediment grain size determines microplastic exposure landscapes for sandy beach macroinfauna

Despite the global occurrence of microplastic contamination on sandy beaches, evidence of microplastic distribution within beaches remains contradictory. When conflicting evidence is used to inform sampling surveys, it increases uncertainty in resulting data. Moreover, it hampers spatially explicit risk characterization of microplastic pollution to intertidal fauna. We aimed to guide sampling designs for microplastic monitoring on beaches, and to quantify macroinfauna exposure to microplastics. Microplastic abundance, quantified between 5 mm–66 μm, lacked a significant zonation across the top sediment layer of sub-terrestrial, upper and lower midlittoral, and swash zones at two sites with varying anthropogenic influence on a microtidal dissipative beach in Uruguay. Microplastic abundance decreased exponentially with increasing grain size, as revealed by Bayesian Poisson regression, although the decrease was less steep compared to prior knowledge regarding sediment – plastic interactions obtained for large (millimeter-sized) industrial pellets. Significant differences in microplastic contamination between the two sites with varying anthropogenic influence likely related to their proximity to a freshwater canal. Corresponding field measurements of body burdens of fibers and irregular particles were significantly lower for the polychaete Euzonus (Thoracophelia) furcifera, despite its preference for finer sediments with higher microplastic loads, compared to the isopods Excirolana braziliensis and Excirolana armata. Results provide critical insights toward representative sampling of microplastics within beach sites. Specifically, we caution against sampling limited to the drift line, and instead recommend: 1) reporting beach morphodynamic characteristics; 2) using clearly defined, ecologically-informed zonation schemes; and 3) accounting for sediment grain size as a covariate to normalize among reported contamination levels. The results contribute valuable baseline data toward realistic exposure landscapes relative to the sediment grain size preferences of macroinfauna, needed to inform laboratory experiments.

Metal-sulfide dynamics in a constructed wetland in the Southeastern United States

The Tritium Processing Facility at the Savannah River Site releases effluent containing copper (Cu), zinc (Zn), and lead (Pb) to the H-02 constructed wetland for remediation before the final release. Sediment cores were collected in the wetland cells in both summer and winter. Concentrations of total metals in all sediment layers and acid-volatile sulfide (AVS) and simultaneously extracted metals (SEM) in surface sediments were determined. Total metal concentrations suggested most metals removed from surface water were retained by the organic-rich flocculent in the top sediment layers instead of being transported to the deeper sulfide mineral layers. The seasonal difference of AVS and SEM indicated a season-related sulfur cycle and metal removal process in the wetland cells. SEM-Zn was the major contributor to total SEM. Metals accumulating in surface sediments were mainly sequestered in AVS and SEM extractable phases including metal-sulfides and organic matter complexes. The general SEM/AVS ratio was > 1, demonstrating the metals associated with sediments were potentially mobile and/or bioavailable, which becomes a concern for the long-term sustainability of the constructed wetland. The disturbance event in the sediment triggered the release of total metals, which were mostly in particulate form and were not bioavailable. Due to the high levels of reduced ion (Fe) in the sediment, the released particulate metals were likely to form metal-scavenging particulate Fe3+ oxyhydroxides under oxic conditions.

A Numerical Investigation of Wave‐Supported Gravity Flow During Cold Fronts Over the Atchafalaya Shelf

AbstractWave‐supported fluid mud (WSFM) plays an important role in sediment downslope transport on the continental shelves. In this study, we incorporated WSFM processes in the wave boundary layer (WBL) into the Community Sediment Transport Modeling System (CSTMS) on the platform of the Coupled Ocean‐Atmosphere‐Wave‐and‐Sediment Transport modeling system (COAWST). The WSFM module was introduced between the bottommost water layer and top sediment layer, which accounted for the key sediment exchange processes (e.g., resuspension, vertical settling, diffusion, and horizontal advection) at the water‐WBL and WBL‐sediment bed boundaries. To test its robustness, we adapted the updated model (CSTMS + WBL) to the Atchafalaya shelf in the northern Gulf of Mexico and successfully reproduced the sediment dynamics in March 2008, when active WSFM processes were reported. Compared with original CSTMS results, including WSFM module weakened the overall intensity of sediment resuspension, and the CSTMS + WBL model simulated a lutocline between the WBL and overlying water due to the formation of WSFM. Downslope WSFM transport resulted in offshore deposition (&gt;4 cm), which greatly changed the net erosion/deposition pattern on the inner shelf off the Chenier Plain. WSFM flux was comparable with suspended sediment flux (SSF) off the Atchafalaya Bay, and it peaked along the Chenier Plain coast where wave activities were strong and the bathymetric slope was steep. The influence of fluvial sediment supply on sediment dynamics was limited in the Atchafalaya Bay. Sensitivity tests of free settling, flocculation, and hindered settling effects suggested that sediments were transported further offshore due to reduced settling velocity in the WBL once fluid mud was formed. Although sediment concentration in the WBL was sensitive to surface sediment critical shear stress, cohesive bed behavior was less important in WSFM dynamics when compared with strong hydrodynamic during cold fronts.

Interception of sedimentary phosphorus release by iron-modified calcite capping

The main aim of this work was to determine the efficiency and mechanism of iron (Fe)-modified calcite (FMCA) capping for preventing the release of phosphorus (P) from sediments. The performance of phosphate removal by FMCAs with different iron loading amounts was investigated using batch experiments, the mechanism for the phosphate removal by FMCA was explored by X-ray photoelectron spectroscopy, and the effect of FMCA capping on P mobilization in sediments at various depths was studied using high-resolution dialysis and diffusive gradient in thin films (DGT). FMCA possessed better phosphate adsorption ability for aqueous phosphate than raw calcite, and the phosphate removal efficiency of FMCA increased with its loading amount of Fe. The replacement of Fe-bound hydroxyl groups with phosphate anions to the inner-sphere surface complexes and the precipitation of calcium phosphate were vital to the sorption of phosphate onto FMCA. FMCA capping could effectively inhibit the release of soluble reactive P (SRP) and labile P monitored by DGT (DGT-P) from sediment to the overlying water. The decrease of DGT-P and pore water SRP in the top sediment layer is very important for the control of sediment-P release into the overlying water. FMCA capping caused reductions of the concentrations of Fe2+ and labile Fe monitored by DGT in the overlying water and the top sediment, suggesting a low risk of Fe releasing from the FMCA capping layer. Iron-modified calcite has the potential to be an active capping material to suppress sedimentary P release.

Storm-induced sediment supply to coastal dunes on sand flats

Abstract. Growth of coastal dunes requires a marine supply of sediment. Processes that control the sediment transfer between the subtidal and the supratidal zone are not fully understood, especially in sand flats close to inlets. It is hypothesised that storm surge events induce sediment deposition on sand flats, providing fresh material for aeolian transport and dune growth. The objective of this study is to identify which processes cause deposition on the sand flat during storm surge conditions and discuss the relationship between the supratidal deposition and sediment supply to the dunes. We use the island of Texel (NL) as a case study, of which multiannual topographic and hydrographic datasets are available. Additionally, we use the numerical model XBeach to simulate the most frequent storm surge events for the area. Results show that supratidal shore-parallel deposition of sand occurs in both the numerical model and the topographic data. The amount of sand deposited is directly proportional to surge level and can account for more than a quarter of the volume deposited at the dunes yearly. Furthermore, storm surges are also capable of remobilising the top layer of sediment of the sand flat, making fresh sediment available for aeolian transport. Therefore, in a sand flat setting, storm surges have the potential of reworking significant amounts of sand for aeolian transport in periods after the storm and as such can also play a constructive role in coastal dune development.

Bacterial communities and nitrogen transformation genes in streambank legacy sediments and implications for biogeochemical processing

Streambank legacy sediments may be important sources of sediment and nutrients from Mid-Atlantic watersheds. However, little is known about the nutrient processing roles of microorganisms that inhabit legacy sediments, let alone their composition, diversity, and distributions. In this study, we sampled 15 streambanks at multiple depths throughout four watersheds in the Mid-Atlantic Region of the USA. High throughput sequencing of 16S ribosomal RNA genes indicated that streambank microbial community composition varied within site depth and across contemporary land uses. Collectively, the most abundant microbial taxa in legacy sediments included Acidobacteria (25–45%), Proteobacteria (15–40%), Nitrospirae (2–10%), Chloroflexi (1–5%), and Actinobacteria (1–10%). Bacterial community composition was distinct between agriculture and urban sites as well as suburban and urban sites. There was significant variation in community composition between the top (1–25%), upper-middle (26–50%), and bottom layers (76–100%) of sediments, while the relative abundances differed between layers for only Acidobacteria and Proteobacteria. Several streambank chemistry variables (metals, %TC, and %TN) had weak positive correlations with community composition. Compared to ammonia-oxidizing bacteria, nitrifying archaea were more predominant. This study provides the first insights into detailed microbial composition of legacy sediments and identifies environmental drivers for community structure and nitrogen processing. Future studies should consider exploring the role of this unique microbial environment for nutrient processing and leaching from legacy sediments and its implications for watershed water quality.

Preliminary Study on Mini-Modus Device Designed to Oxygenate Bottom Anoxic Waters without Perturbing Polluted Sediments

The Tangential Guanabara Bay Aeration and Recovery (TAGUBAR) project derives its origins from a Brazilian government decision to tackle the planning and management challenges related to the restoration of some degraded aquatic ecosystems such as Guanabara Bay (state of Rio de Janeiro), Vitória Bay, and Espírito Santo Bay (state of Espírito Santo). This was performed by using the successful outcomes of a previous Ministry of Foreign Affairs and Directorate General for Cooperation and Development (i.e., Direttore Generale alla Cooperazione allo Sviluppo, MFA–DGCS) cooperation program. The general objective of the program was to contribute to the economic and social development of the population living around Guanabara, Vitória, and Espírito Santo Bays, while promoting the conservation of their natural resources. This objective was supposed to be achieved by investing money to consolidate the local authorities’ ability to plan and implement a reconditioning program within a systemic management framework in severely polluted ecosystems such as Guanabara Bay, where sediments are highly contaminated. Sediments normally represent the final fate for most contaminants. Therefore, it would be highly undesirable to perturb them, if one wishes to avoid contaminant recycling. In this context, we explored a bench-scale novel technology, called the module for the decontamination of units of sediment (MODUS), which produces an oxygenated water flow directed parallel to the sediment floor that is aimed to create “tangential aeration” of the bottom water column. The purpose of this is to avoid perturbing the top sediment layer, as a flow directed toward the bottom sediment would most probably resuspend this layer. Three kinds of tests were performed to characterize a bench-scale version of MODUS (referred to as “mini-MODUS”) behavior: turbulence–sediment resuspension tests, hydrodynamic tests, and oxygenation–aeration tests. In order to understand the functioning of the mini-MODUS, we needed to eliminate as many variables as possible. Therefore, we chose a static version of the module (i.e., no speed for the mini-MODUS as well as no water current with respect to the bottom sediment and no flume setting), leaving dynamic studies for a future paper. The turbulence tests showed that the water enters and exits the mini-MODUS mouths without resuspending the sediment surface at all, even if the sediment is very soft. Water flow was only localized very close to both mouth openings. Hydrodynamic tests showed an interesting behavior. An increase of low air flows produced a sharp linear increase of the water flow. However, a plateau was quickly reached and then no further increase of water flow was observed, implying that for a certain specific geometry of the equipment and for the given experimental conditions, an increase in the air flow does not produce any reduction of the residence time within the aeration reactor. Oxygenation–aeration tests explored three parameters that were deemed to be most important for our study: the oxygen global transfer coefficient, KLa; the oxygenation capacity, OC; and the oxygenation efficiency, OE%. An air flow increase causes an increase of both KLa and OC, while OE% decreases (no plateau was observed for KLa and OC). The better air flow would be a compromise between high KLa and OC, with no disadvantageous OE%, a compromise that will be the topic of the next paper.

Past studies and potential measures for rehabilitation of the shallow lake (Lake Ludas)

Lake Ludas has been under a strong anthropogenic influence for a very long time, so the history of fruitful scientific investigation was very often connected with the evaluation of a human impact and potential rehabilitation measures. Unfortunately, attempts to improve the lake's natural status remain more in the field of theoretical models than concrete practical solutions. Aiming to better understand the potential of different rehabilitation measures for Lake Ludas, we combined our ecological analyses (unpublished results) and the literature survey. The continuous massive cyanobacterial bloom and the formation of a thick sediment layer rich in different organic and inorganic pollutants represent two major challenges in the lake's rehabilitation. The unknown ecological role of invasive species that have already colonised Lake Ludas will make the attempts to improve conditions in the lake even more challenging. The reduction of nutrient load, changes in the intensity and directions of water circulation, as well as top sediment layer removal in the lake, are measures under consideration for several decades. But their combination, order of implementation and possibilities of successful execution are still under debate. However, there is no doubt that the restoration of a natural hydrological regime should be a key step in the rehabilitation of Lake Ludas.

A new method to overall immobilization of phosphorus in sediments through combined application of capping and oxidizing agents

A new method has been developed for improving the overall immobilization efficiency of phosphorus (P) in sediment. A capping agent (lanthanum modified bentonite, LMB) was sprinkled on the sediment surface to prevent the release of P in the top sediment layer. Meanwhile, an oxidizing agent (calcium nitrate, CN) was injected into the sediment layer (~5 cm) to immobilize labile P in deep sediment layers. High-resolution sampling techniques, including diffusive gradients in thin films (DGT) and high-resolution dialysis (HR-Peeper) were employed to investigate the fine-scale changes of labile and/or soluble nitrogen, P, sulfide and iron in sediments, respectively. The results showed that the combined application of LMB and CN had significant advantages over the individual treatments. The average concentrations of soluble reactive phosphorus (SRP) (0.01 mg/L) in the overlying water after a 68-day incubation were only 10%, 21% and 4% for the CK, LMB and CN treatments, respectively. Furthermore, the immobilization effect caused by the combined treatment reached from the sediment-water interface to a depth of 60 mm in the sediment, and the effective depth was much >20 mm caused by LMB treatment. The concentrations of SRP in the sediment profile were also lower than those of the other treatments. The results of this work indicate that the combined application of capping and oxidizing agents is a promising method to control water eutrophication by preventing the release of P from both the top and deep sediment layers.

Effects of carbonic anhydrase inhibition on biomass and primary production of estuarine benthic microalgal communities

Recent studies have focused on carbon concentrating mechanisms and the associated enzyme, carbonic anhydrase, to better understand the efficiency of CO2 uptake rates and carbon fixation in photoautotrophs. Some benthic microalgae (BMA) may be limited by inorganic carbon availability because high photosynthetic rates withdraw a large amount of CO2 and HCO3– in the top layer of sediment. Investigating the mechanisms that affect carbon acquisition are necessary if we are to fully understand the functioning and structuring processes of these systems. From this, we can better predict the potential impacts of increasing atmospheric CO2 concentrations on BMA communities. The purpose of this research was to examine a carbon concentrating mechanism used by BMA through their responses to induced carbon limitation. This approach was conducted through the removal of carbonic anhydrase (CA) activity using an inhibitor, ethoxyzolamide. Microcosm experiments were performed on intertidal muddy sediments from North Inlet Estuary, SC. Exposure to ethoxyzolamide resulted in a reduction of gross primary productivity (GPP) without a reduction in total BMA biomass. Furthermore, removed CA activity caused BMA cumulative GPP maxima to shift upward toward the surface in the sediment column. Active CA was necessary to maintain high GPP rates in these communities and allowed motile BMA to use a wider portion of the sediment column. Available HCO3– at lower depths could still be dehydrated into CO2 by microalgae with CA. Changes in global atmospheric CO2 concentrations leading to higher CO2 availability at the atmosphere-sediment interface may alter the structure and function of these BMA systems, and the vertical distribution of GPP. These consequences may have important implications for the biogeochemical cycling occurring in estuaries.

Spatial and seasonal dynamics of elemental composition and mineralogy of intertidal and subtidal sediments in the Lima estuary (NW Portugal)

In estuaries, the mineral distribution in the top sediment layer results from the combined effect of fluvial and coastal inputs and may present seasonal patterns owing to forcing, e.g., floods, storms, waves, and tides. Our main goal was to study the estuarine sedimentological components, including textural and geochemical parameters, in order to characterize the seasonal and spatial dynamics of subtidal and intertidal sediments in a highly energetic temperate estuary (River Lima, NW Portugal). Subtidal sediments were usually anoxic within the middle estuary and presented higher amounts of clay and silt than intertidal sediments. Oxygen, silicon, carbon, aluminum, and potassium were the most abundant elements. The amount of silicon and carbon was related to the clay and silt content of the sediments. The mineralogical composition of sediments reflected the lithology of the watershed, with the most representative minerals being quartz, microcline (k-alkaloid feldspar), and albite (plagioclase), in line with the results obtained in the elementary characterization. The lower stretches were particularly rich in iron silicates and anatase. No clear seasonal variation was found for sediment elemental and mineralogical compositions. Factor analysis explained 80% of the elemental origin, being 33% related to terrigenous origin, 24% to marine sediments, and 15% to anthropogenic inputs.

Mercury speciation and mercury stable isotope composition in sediments from the Canadian Arctic Archipelago

Total mercury (THg) and monomethylmercury (MMHg) concentrations as well as mercury (Hg) isotope ratios were determined in sediment cores sampled from six locations from the Canadian Arctic Archipelago (CAA). At most sites, THg concentrations showed a decreasing trend with depth, ranging from 5 to 61 ng/g, implicating possible increased Hg deposition and/or riverine inputs in top sediment layers. MMHg values showed large oscillations within the top 10 cm of the cores. This variability decreased at the bottom of the cores with MMHg concentrations ranging from less than12 to up to 1073 pg/g. Average concentrations of THg and MMHg in the top 10 cm were linearly correlated, whereas no correlation was observed with organic matter (loss on ignition). Mercury isotope ratios showed negative values for both δ202Hg (−1.59 to −0.55‰) and Δ199Hg (−0.62 to −0.01‰). δ202Hg values became more negative with depth, while the opposite was observed for Δ199Hg. The former is consistent with predicted historical atmospheric Hg trends as a result of increased coal burning worldwide. Hg isotope ratio measurements in CAA sediments offer additional opportunities to trace Hg processes and sources in the Arctic.

Magnetically-mediated regeneration and reuse of core-shell Fe0@FeIII granules for in-situ hydrogen sulfide control in the river sediments

A novel iron-cycling process based on core-shell iron granules, which contained zero-valent iron (Fe0) in the core and maghemite (γ-Fe2O3) on the shell (Fe0@FeIII granules), was proposed to in-situ control hydrogen sulfide in the sediments of the polluted urban rivers. The Fe0@FeIII granules added in the top sediment layer removed 97% of sulfide generated by sulfate-reducing bacteria in the sediments, and the sulfide removal capacity of virgin granules was 163 mg S/g Fe (114 mg S/g granule). The Fe0@FeIII granules removed the formed sulfide through the abiotic sulfide oxidation and precipitation, and they also stimulated the microbial iron reduction, which competitively consumed wastewater-derived organics and partially inhibited the sulfate reduction in the sediments. The used Fe0@FeIII granules were easily regenerated through magnetic separation from sediments and air exposure for 12 h, which enhanced the sulfide removal capacities of the regenerated granules by 12%–22%, compared to the virgin granules. During the air exposure, ferrous products (i.e., iron sulfide and surface-associated FeII) on the granule shell were completely oxidized to poorly ordered FeIII hydroxides (γ-FeOOH and amorphous FeOOH) having larger specific surface areas and higher reactivity to sulfide than γ-Fe2O3 on the virgin granules. Meanwhile, the Fe0 in the core was also partially oxidized through the indirect electron transfer, which was facilitated by the electrically conductive iron oxide minerals (Fe3O4 and Fe2O3) and the microbial electron carriers (e.g., Geobacter). The oxidation of Fe0 core contributed additional FeIII hydroxides to the sulfide control. The Fe0@FeIII granules were reused for four times in a 293-day trial, and their overall sulfide removal capacity was at least 920 mg S/g Fe. The proposed iron-cycling process can be a chemical-saving, energy-saving and cost-effective approach for the hydrogen sulfide control in the sediments of polluted urban rivers, as well as lakes, aquaculture ponds and marine.

Genome Sequence of Arenibacter algicola Strain SMS7, Found in Association with the Marine Diatom Skeletonema marinoi.

Arenibacter algicola strain SMS7 was isolated from a culture of the marine diatom Skeletonema marinoi strain ST54, sampled from top-layer sediments in Kosterfjord, Sweden. Here, we present its 5,857,781-bp genome, consisting of a circular chromosome and one circular plasmid, in all containing 4,932 coding sequences.