Thermal desorption has attracted considerable interest as a remediation technology for the removal of dioxins and polychlorinated biphenyls (PCBs) from contaminated soils and sediments. Although several research groups have confirmed that polychlorinated dibenzofurans (PCDFs) are formed from PCBs during the thermal desorption of sediments contaminated with PCB, the formation pathways remain poorly understood. Herein, thermal desorption has been used to develop a greater understanding of the formation pathways of PCDFs from sediments contaminated with PCBs. PCB decomposition experiments of sediments contaminated with PCBs were performed over 5min at 450°C with a gas composition of 10% O2/90% N2, either in the absence (Run 1) or presence (Run 2–4) of one of three different 13C12-labeled PCB individual standards. The results of Run 1 showed that 99.96% of PCBs and 98.40% of polychlorinated dibenzo-p-dioxins (PCDDs) in the treated sediments had decomposed, whereas the concentration levels of PCDFs had increased by a factor of 31. The addition of different 13C12-labeled PCBs to the sediment sample yielded different 13C12-PCDFs isomer patterns, with formation pathways including loss of ortho-Cl2, loss of HCl involving a 2,3-chlorine shift, loss of ortho-H2 and dechlorination.