We synthesized Ba1−xSrxTiO3 (BST) and Co doped Ba0.75Sr0.25CoxTi1−xO3 (BSCTx) compositions (x = 0.03, 0.05, 0.07) by the solid state reaction route and probed the effect of Co-doping on the structural, microstructural, dielectric and phonon behaviour. Room temperature x-ray diffraction patterns of sintered ceramics reveal perovskite type average cubic crystalline structure (space group Pm-3m) for all doped compositions, whereas, pure BST composition stabilizes in the tetragonal crystalline phase (space group P4mm). Absence of any impurity peaks in the doped samples reveals that Co-ions are entering into the lattice without any metal clustering. Quantitative full profile fitting using Reitveld refinement fits well in the cubic phase giving a small value of goodness of the fitting parameter (Rwp). The real part of the dielectric permittivity as well as dielectric loss (tan δ) decreases with Co-doping indicating that intrinsic defects get annealed with doping. \( (\varepsilon^{\prime}/\varepsilon^{\prime\prime} - T) \) plots clearly show the cubic to tetragonal phase transition in BST at around 50°C, whereas Co-doped samples show no such transition in the temperature range studied. Temperature dependent Raman spectra reveal the characteristic phonon modes associated with the tetragonal phase at room temperature, whereas, Co-doped samples exhibit only bands associated with local disorder in the cubic phase. The spectral features of tetragonal phase appear around − 10°C in the 3% Co-doped system indicating the decrease of transition temperature with Co-doping. The analysis of deconvoluted Raman parameters using two sub-lattice models clearly reveals the structural disorder due to doping with slightly distorted TiO6 octahedra getting almost perfect thus giving rise to a cubic phase in the doped system.