Cosmological observations from ground at millimetre and sub-millimetre wavelengths are affected by atmospheric absorption and consequent emission. The low and high frequency (sky noise) fluctuations of atmospheric performance imply careful observational strategies and/or instrument technical solutions. Measurements of atmospheric emission spectra are necessary for accurate calibration procedures as well as for site testing statistics. CASPER2, an instrument to explore the 90-450 GHz (3-15 1/cm) spectral region, was developed and verified its operation in the Alps. A Martin-Puplett Interferometer (MPI) operates comparing sky radiation, coming from a field of view (fov) of 28 arcminutes (FWHM) collected by a 62-cm in diameter Pressman-Camichel telescope, with a reference source. The two output ports of the interferometer are detected by two bolometers cooled down to 300 mK inside a wet cryostat. Three different and complementary interferometric techniques can be performed with CASPER2: Amplitude Modulation (AM), Fast-Scan (FS) and Phase Modulation (PM). An altazimuthal mount allows the sky pointing, possibly co-alligned to the optical axis of the 2.6-m in diameter telescope of MITO (Millimetre and Infrared Testagrigia Observatory, Italy). Optimal timescale to average acquired spectra is inferred by Allan variance analysis at 5 fiducial frequencies. We present the motivation for and design of the atmospheric spectrometer CASPER2. The adopted procedure to calibrate the instrument and preliminary performance of the instrument are described. Instrument capabilities were checked during the summer observational campaign at MITO in July 2010 by measuring atmospheric emission spectra with the three different procedures.